RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 MRPS18BQ9Y676 258 aaKnown RBP5.55□□□□□ -1.52
PRKDC-202ENST00000338368 SP1P08047 785 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 OMGP23515 440 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 GSK3AP49840 483 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 FABP6P51161 128 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 TFAP2EQ6VUC0 442 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-202ENST00000338368 NFAM1Q8NET5 270 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-202ENST00000338368 PRMT8Q9NR22 394 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-202ENST00000338368 MRPL22Q9NWU5 206 aaKnown RBP5.55□□□□□ -1.52
PRKDC-202ENST00000338368 EFSO43281 561 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 ADRB1P08588 477 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 FUT3P21217 361 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 GNG3P63215 75 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 HAS2Q92819 552 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 SLAMF9Q96A28 289 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 MFRPQ9BY79 579 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 CNTNAP3Q9BZ76 1288 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 GHITMQ9H3K2 345 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 CYB5R1Q9UHQ9 305 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 PROCRQ9UNN8 238 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 PCP4L1A6NKN8 68 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 CRYZL1O95825 349 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 COX6A1P12074 109 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 RPA2P15927 270 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 NKX2-1P43699 371 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-202ENST00000338368 BAP18Q8IXM2 172 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 OR10J5Q8NHC4 309 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 PHF3Q92576 2039 aaKnown RBP5.55□□□□□ -1.52
PRKDC-202ENST00000338368 IGLV3-12A0A075B6K2 115 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 EDDM3BP56851 147 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 OR8G1Q15617 311 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 SPATA46Q5T0L3 261 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 OR51H1Q8NH63 302 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 ZNF519Q8TB69 540 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 SDHAF2Q9NX18 166 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 NYNRINQ9P2P1 1898 aaKnown RBP5.55□□□□□ -1.52
PRKDC-202ENST00000338368 SMCO3A2RU48 225 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 IFNA1P01562 189 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 PGA4P0DJD7 388 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 PGA3P0DJD8 388 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 PPP1R1AQ13522 171 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 OR11H7Q8NGC8 314 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 ABHD3Q8WU67 409 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 GPR35Q9HC97 309 aa5.55□□□□□ -1.52
PRKDC-202ENST00000338368 RAB19A4D1S5 217 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 EIF2S3LQ2VIR3 472 aaKnown RBP5.54□□□□□ -1.52
PRKDC-202ENST00000338368 DYNLRB1Q9NP97 96 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 FAM74A1Q5RGS3 127 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 MESP1Q9BRJ9 268 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 CHST6Q9GZX3 395 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 FCGR2CP31995 323 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 TAGLNQ01995 201 aaKnown RBP5.54□□□□□ -1.52
PRKDC-202ENST00000338368 LOXL4Q96JB6 756 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 MAP6Q96JE9 813 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 GNG12Q9UBI6 72 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 VWA8A3KMH1 1905 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 SPAARA0A1B0GVQ0 90 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 TUSC2O75896 110 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 CFHR1Q03591 330 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 CDH26Q8IXH8 852 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 TMEM251Q8N6I4 163 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 SLC26A1Q9H2B4 701 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 TRBV5-7A0A0A0MS05 114 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 IGKV1D-43A0A0B4J1Z2 117 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 SFT2D2O95562 160 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 CST2P09228 141 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 ERVK-16P61578 105 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 ZNF718Q3SXZ3 478 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 PECRQ9BY49 303 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 LPAR5Q9H1C0 372 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 LUZP4Q9P127 313 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 MED6O75586 246 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 ADAP1O75689 374 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 NHLRC1Q6VVB1 395 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 SULT4A1Q9BR01 284 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 KIAA1671Q9BY89 1806 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 LRRC30A6NM36 301 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 CEBPZOSA8MTT3 80 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 MKRN2OSH3BPM6 223 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 SP9P0CG40 484 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 DUSP1P28562 367 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 SFRP5Q5T4F7 317 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 RPS4Y2Q8TD47 263 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 SLC7A10Q9NS82 523 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 ZNF17P17021 662 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 CA6P23280 308 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 C11orf87Q6NUJ2 197 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 MRPS24Q96EL2 167 aaKnown RBP5.54□□□□□ -1.52
PRKDC-202ENST00000338368 SLC23A1Q9UHI7 598 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 A0A1W2PR80 420 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 RFPL4AA6NLU0 287 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 RFPL4AL1F8VTS6 287 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 PRRG2O14669 202 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 PDCD6O75340 191 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 ACTL6AO96019 429 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 IFNA17P01571 189 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 SELEP16581 610 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 CLLU1Q5K131 121 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 OR2A2Q6IF42 318 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms