RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 PKIBQ9C010 78 aa13.2□□□□□ -0.3
MRPL55-202ENST00000336300 ZCCHC4Q9H5U6 513 aa13.2□□□□□ -0.3
MRPL55-202ENST00000336300 BLOC1S6Q9UL45 172 aa13.2□□□□□ -0.3
MRPL55-202ENST00000336300 POLR3KQ9Y2Y1 108 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-202ENST00000336300 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.19□□□□□ -0.32e-6■■■■□ 23.5
MRPL55-202ENST00000336300 NKX6-3A6NJ46 265 aa13.19□□□□□ -0.3
MRPL55-202ENST00000336300 A8MXK9 166 aa13.19□□□□□ -0.3
MRPL55-202ENST00000336300 MAGEB3O15480 346 aa13.19□□□□□ -0.3
MRPL55-202ENST00000336300 PHF1O43189 567 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-202ENST00000336300 ZFP36P26651 326 aaKnown RBP13.19□□□□□ -0.3
MRPL55-202ENST00000336300 SRP14P37108 136 aaKnown RBP13.19□□□□□ -0.3
MRPL55-202ENST00000336300 MTCP1P56278 107 aa13.19□□□□□ -0.3
MRPL55-202ENST00000336300 SEC61A1P61619 476 aaKnown RBP13.19□□□□□ -0.3
MRPL55-202ENST00000336300 LYPD2Q6UXB3 125 aa13.19□□□□□ -0.3
MRPL55-202ENST00000336300 BTNL3Q6UXE8 466 aa13.19□□□□□ -0.3
MRPL55-202ENST00000336300 LHFPL2Q6ZUX7 228 aa13.19□□□□□ -0.3
MRPL55-202ENST00000336300 FAM90A1Q86YD7 464 aa13.19□□□□□ -0.3
MRPL55-202ENST00000336300 NANOGP1Q8N7R0 232 aa13.19□□□□□ -0.3
MRPL55-202ENST00000336300 OR10AC1Q8NH08 325 aa13.19□□□□□ -0.3
MRPL55-202ENST00000336300 CPNE2Q96FN4 548 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-202ENST00000336300 DNTTIP1Q9H147 329 aa13.19□□□□□ -0.3
MRPL55-202ENST00000336300 NLKQ9UBE8 527 aa13.19□□□□□ -0.3
MRPL55-202ENST00000336300 KAAG1Q9UBP8 84 aa13.19□□□□□ -0.3
MRPL55-202ENST00000336300 RGS10O43665 173 aa13.18□□□□□ -0.3
MRPL55-202ENST00000336300 RRP9O43818 475 aaKnown RBP13.18□□□□□ -0.3
MRPL55-202ENST00000336300 NOS1APO75052 506 aaPredicted RBP13.18□□□□□ -0.3
MRPL55-202ENST00000336300 ACAA1P09110 424 aaPredicted RBP13.18□□□□□ -0.3
MRPL55-202ENST00000336300 SRD5A1P18405 259 aa13.18□□□□□ -0.3
MRPL55-202ENST00000336300 AZGP1P25311 298 aaKnown RBP13.18□□□□□ -0.3
MRPL55-202ENST00000336300 HOXA4Q00056 320 aaPredicted RBP13.18□□□□□ -0.3
MRPL55-202ENST00000336300 IL24Q13007 206 aa13.18□□□□□ -0.3
MRPL55-202ENST00000336300 SMIM21Q3B7S5 101 aa13.18□□□□□ -0.3
MRPL55-202ENST00000336300 C11orf91Q3C1V1 193 aa13.18□□□□□ -0.3
MRPL55-202ENST00000336300 RBM48Q5RL73 367 aaKnown RBP13.18□□□□□ -0.3
MRPL55-202ENST00000336300 WDR25Q64LD2 544 aaPredicted RBP13.18□□□□□ -0.3
MRPL55-202ENST00000336300 ANGPTL5Q86XS5 388 aa13.18□□□□□ -0.3
MRPL55-202ENST00000336300 MKXQ8IYA7 352 aa13.18□□□□□ -0.3
MRPL55-202ENST00000336300 PARP16Q8N5Y8 322 aa13.18□□□□□ -0.3
MRPL55-202ENST00000336300 POC1AQ8NBT0 407 aa13.18□□□□□ -0.3
MRPL55-202ENST00000336300 GHSRQ92847 366 aa13.18□□□□□ -0.3
MRPL55-202ENST00000336300 MED30Q96HR3 178 aa13.18□□□□□ -0.3
MRPL55-202ENST00000336300 OPALINQ96PE5 141 aa13.18□□□□□ -0.3
MRPL55-202ENST00000336300 MRI1Q9BV20 369 aa13.18□□□□□ -0.3
MRPL55-202ENST00000336300 CDCA4Q9BXL8 241 aa13.18□□□□□ -0.3
MRPL55-202ENST00000336300 WDR13Q9H1Z4 485 aa13.18□□□□□ -0.3
MRPL55-202ENST00000336300 C7orf69Q9H7B7 122 aa13.18□□□□□ -0.3
MRPL55-202ENST00000336300 SNTG1Q9NSN8 517 aa13.18□□□□□ -0.3
MRPL55-202ENST00000336300 MALRD1Q5VYJ5 2156 aa13.18□□□□□ -0.3
MRPL55-202ENST00000336300 SVEP1Q4LDE5 3571 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 LOC105371242A0A075B767 164 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 OR2AT4A6NND4 320 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 TNFRSF13BO14836 293 aaPredicted RBP13.17□□□□□ -0.3
MRPL55-202ENST00000336300 GPR37O15354 613 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 NDUFB3O43676 98 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 SULT1B1O43704 296 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 SYNGR1O43759 233 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 ALX3O95076 343 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 NXPH2O95156 264 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 IFNA2P01563 188 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 MT-ND2P03891 347 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 PGA5P0DJD9 388 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 EEF1B2P24534 225 aaKnown RBP13.17□□□□□ -0.3
MRPL55-202ENST00000336300 MPZP25189 248 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 SOX2P48431 317 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 SLC35A2P78381 396 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 BDH1Q02338 343 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 SCGB2A2Q13296 93 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 YIF1BQ5BJH7 314 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 LRRC10Q5BKY1 277 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 ATPAF1Q5TC12 328 aaPredicted RBP13.17□□□□□ -0.3
MRPL55-202ENST00000336300 DMKNQ6E0U4 476 aaPredicted RBP13.17□□□□□ -0.3
MRPL55-202ENST00000336300 XAF1Q6GPH4 301 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 ZNF485Q8NCK3 441 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 OR5T2Q8NGG2 359 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 OR13C9Q8NGT0 318 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 RPS4Y2Q8TD47 263 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 CCL13Q99616 98 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 CCDC90BQ9GZT6 254 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 RASSF4Q9H2L5 321 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 DUSP21Q9H596 190 aa13.17□□□□□ -0.3
MRPL55-202ENST00000336300 IGKV1-9A0A0C4DH69 117 aa13.16□□□□□ -0.3
MRPL55-202ENST00000336300 KIAA1324LA8MWY0 1029 aaPredicted RBP13.16□□□□□ -0.3
MRPL55-202ENST00000336300 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.16□□□□□ -0.3
MRPL55-202ENST00000336300 ECDO95905 644 aaPredicted RBP13.16□□□□□ -0.3
MRPL55-202ENST00000336300 LIPFP07098 398 aa13.16□□□□□ -0.3
MRPL55-202ENST00000336300 HCKP08631 526 aa13.16□□□□□ -0.3
MRPL55-202ENST00000336300 FAM157CP0CG43 387 aa13.16□□□□□ -0.3
MRPL55-202ENST00000336300 HOXB4P17483 251 aaPredicted RBP13.16□□□□□ -0.3
MRPL55-202ENST00000336300 CELP19835 753 aa13.16□□□□□ -0.3
MRPL55-202ENST00000336300 RAB3AP20336 220 aa13.16□□□□□ -0.3
MRPL55-202ENST00000336300 CRHBPP24387 322 aa13.16□□□□□ -0.3
MRPL55-202ENST00000336300 GABRA2P47869 451 aa13.16□□□□□ -0.3
MRPL55-202ENST00000336300 IL13RA1P78552 427 aa13.16□□□□□ -0.3
MRPL55-202ENST00000336300 SPHARQ15513 63 aa13.16□□□□□ -0.3
MRPL55-202ENST00000336300 STUMQ69YW2 141 aa13.16□□□□□ -0.3
MRPL55-202ENST00000336300 ZNF841Q6ZN19 808 aa13.16□□□□□ -0.3
MRPL55-202ENST00000336300 CALHM1Q8IU99 346 aa13.16□□□□□ -0.3
MRPL55-202ENST00000336300 Q8IYB0 196 aa13.16□□□□□ -0.3
MRPL55-202ENST00000336300 RAB40AQ8WXH6 277 aa13.16□□□□□ -0.3
MRPL55-202ENST00000336300 THRSPQ92748 146 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms