RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 OR1S1Q8NH92 325 aa6.04□□□□□ -1.44
SF3B1-201ENST00000335508 NUDCD2Q8WVJ2 157 aa6.04□□□□□ -1.44
SF3B1-201ENST00000335508 SECTM1Q8WVN6 248 aa6.04□□□□□ -1.44
SF3B1-201ENST00000335508 RTN4IP1Q8WWV3 396 aaPredicted RBP6.04□□□□□ -1.44
SF3B1-201ENST00000335508 EXTL1Q92935 676 aa6.04□□□□□ -1.44
SF3B1-201ENST00000335508 PIGMQ9H3S5 423 aa6.04□□□□□ -1.44
SF3B1-201ENST00000335508 RAB6AP20340 208 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 HCCSP53701 268 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 C20orf196Q8IYI0 205 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 SPACA5Q96QH8 159 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 PRDM14Q9GZV8 571 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 BANF2Q9H503 90 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 MYO16Q9Y6X6 1858 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 A0A1B0GUH1 482 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 PRF1P14222 555 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 HIST1H1DP16402 221 aaKnown RBP6.03□□□□□ -1.44
SF3B1-201ENST00000335508 PRDX4Q13162 271 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 C1orf185Q5T7R7 199 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 ERGIC1Q969X5 290 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 DHRS9Q9BPW9 319 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 MRPL13Q9BYD1 178 aaKnown RBP6.03□□□□□ -1.44
SF3B1-201ENST00000335508 SRCAPQ6ZRS2 3230 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 TMEM30CPA0ZSE6 113 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 MED6O75586 246 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 TOXO94900 526 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 LALBAP00709 142 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 APOA2P02652 100 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 ISG15P05161 165 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 NDUFB7P17568 137 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 PPP1CBP62140 327 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 FNDC7Q5VTL7 733 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 NPAP1Q9NZP6 1156 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 NEUROG3Q9Y4Z2 214 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 KCNMB2Q9Y691 235 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 ZSWIM8A7E2V4 1837 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 CENPFP49454 3210 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 IGKV3D-15A0A087WSY6 115 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 ANGPTL7O43827 346 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 GMDSO60547 372 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 TTRP02766 147 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 HBG1P69891 147 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 HBG2P69892 147 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 TIMM23BQ5SRD1 257 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 CATSPERDQ86XM0 798 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 OR10J5Q8NHC4 309 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 ZNF519Q8TB69 540 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 RBM14Q96PK6 669 aaKnown RBP6.03□□□□□ -1.44
SF3B1-201ENST00000335508 DCAF16Q9NXF7 216 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 OR6C3Q9NZP0 311 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 PPP1R3CQ9UQK1 317 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 MS4A18H0YCH9 400 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 NDUFA2O43678 99 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 ZIC3O60481 467 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 MDH2P40926 338 aaKnown RBP6.03□□□□□ -1.44
SF3B1-201ENST00000335508 IL13RA2Q14627 380 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 MS4A18Q3C1V0 323 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 AADACL3Q5VUY0 350 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 OR2AE1Q8NHA4 323 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 MAP6Q96JE9 813 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 RAB1BQ9H0U4 201 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 HEATR1Q9H583 2144 aaKnown RBP6.03□□□□□ -1.44
SF3B1-201ENST00000335508 MAST4O15021 2626 aa6.03□□□□□ -1.44
SF3B1-201ENST00000335508 WDR81Q562E7 1941 aa6.02□□□□□ -1.44
SF3B1-201ENST00000335508 hADV38S2A0JD32 116 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 IL5P05113 134 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 PGA4P0DJD7 388 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 PGA3P0DJD8 388 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 ZNF83P51522 516 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 OR8B8Q15620 311 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 ZNF362Q5T0B9 420 aaPredicted RBP6.02□□□□□ -1.45
SF3B1-201ENST00000335508 LCN10Q6JVE6 187 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 LYPD4Q6UWN0 246 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 DTX3Q8N9I9 347 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 DEFB108BQ8NET1 73 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 OR2AK2Q8NG84 335 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 OR8B12Q8NGG6 310 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 OR5D13Q8NGL4 314 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 OR13C5Q8NGS8 318 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 GPX8Q8TED1 209 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 SLC39A7Q92504 469 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 CCDC120Q96HB5 630 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 MRPL15Q9P015 296 aaKnown RBP6.02□□□□□ -1.45
SF3B1-201ENST00000335508 TRGV10A0A0A0MS01 117 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 A0A0D9SG52 128 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 SLC33A1O00400 549 aaPredicted RBP6.02□□□□□ -1.45
SF3B1-201ENST00000335508 NEURL1O76050 574 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 OR8U9P0C7N5 309 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 GLRXP35754 106 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 LUMP51884 338 aaPredicted RBP6.02□□□□□ -1.45
SF3B1-201ENST00000335508 HFEQ30201 348 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 LRRC37A5PQ49AS3 106 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 TMEM128Q5BJH2 165 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 RFPL4BQ6ZWI9 263 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 ADAT1Q9BUB4 502 aaKnown RBP6.02□□□□□ -1.45
SF3B1-201ENST00000335508 MYOZ1Q9NP98 299 aaPredicted RBP6.02□□□□□ -1.45
SF3B1-201ENST00000335508 RDH8Q9NYR8 311 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 OR5V1Q9UGF6 321 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 MGAMO43451 1857 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 TRBV5-5A0A0J9YX44 114 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 M0R1B8 84 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms