RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 SKA3Q8IX90 412 aa11.66□□□□□ -0.54
RC3H2-201ENST00000335387 IQCF2Q8IXL9 164 aa11.66□□□□□ -0.54
RC3H2-201ENST00000335387 MAML2Q8IZL2 1156 aaPredicted RBP11.66□□□□□ -0.54
RC3H2-201ENST00000335387 LINC00518Q8N0U6 118 aa11.66□□□□□ -0.54
RC3H2-201ENST00000335387 COMMD1Q8N668 190 aa11.66□□□□□ -0.54
RC3H2-201ENST00000335387 C18orf12Q96KH6 178 aa11.66□□□□□ -0.54
RC3H2-201ENST00000335387 ZNF385AQ96PM9 386 aaKnown RBP11.66□□□□□ -0.54
RC3H2-201ENST00000335387 TSNAXQ99598 290 aaKnown RBP11.66□□□□□ -0.54
RC3H2-201ENST00000335387 SLC39A1Q9NY26 324 aa11.66□□□□□ -0.54
RC3H2-201ENST00000335387 PIGLQ9Y2B2 252 aa11.66□□□□□ -0.54
RC3H2-201ENST00000335387 GJE1A6NN92 205 aa11.66□□□□□ -0.54
RC3H2-201ENST00000335387 GPR31O00270 319 aa11.66□□□□□ -0.54
RC3H2-201ENST00000335387 CHATP28329 748 aa11.66□□□□□ -0.54
RC3H2-201ENST00000335387 MLF1P58340 268 aa11.66□□□□□ -0.54
RC3H2-201ENST00000335387 BLOC1S1P78537 153 aa11.66□□□□□ -0.54
RC3H2-201ENST00000335387 SRSF3P84103 164 aaKnown RBP11.66□□□□□ -0.54
RC3H2-201ENST00000335387 CHAF1BQ13112 559 aa11.66□□□□□ -0.54
RC3H2-201ENST00000335387 CHRFAM7AQ494W8 412 aa11.66□□□□□ -0.54
RC3H2-201ENST00000335387 ABLIM2Q6H8Q1 611 aa11.66□□□□□ -0.54
RC3H2-201ENST00000335387 COMMD2Q86X83 199 aa11.66□□□□□ -0.54
RC3H2-201ENST00000335387 SEMA6DQ8NFY4 1073 aa11.66□□□□□ -0.54
RC3H2-201ENST00000335387 OR51F2Q8NH61 342 aa11.66□□□□□ -0.54
RC3H2-201ENST00000335387 TMED6Q8WW62 240 aa11.66□□□□□ -0.54
RC3H2-201ENST00000335387 ATPIF1Q9UII2 106 aa11.66□□□□□ -0.54
RC3H2-201ENST00000335387 ZNF175Q9Y473 711 aa11.66□□□□□ -0.54
RC3H2-201ENST00000335387 OR5H15A6NDH6 313 aa11.65□□□□□ -0.54
RC3H2-201ENST00000335387 H7C1Q1 480 aa11.65□□□□□ -0.54
RC3H2-201ENST00000335387 SMAD9O15198 467 aaKnown RBP11.65□□□□□ -0.54
RC3H2-201ENST00000335387 KCNAB3O43448 404 aa11.65□□□□□ -0.54
RC3H2-201ENST00000335387 JTBO76095 146 aa11.65□□□□□ -0.54
RC3H2-201ENST00000335387 FCGR2AP12318 317 aa11.65□□□□□ -0.54
RC3H2-201ENST00000335387 ZNF585AQ6P3V2 769 aa11.65□□□□□ -0.54
RC3H2-201ENST00000335387 LHFPL2Q6ZUX7 228 aa11.65□□□□□ -0.54
RC3H2-201ENST00000335387 CPT1CQ8TCG5 803 aa11.65□□□□□ -0.54
RC3H2-201ENST00000335387 KCNE4Q8WWG9 221 aa11.65□□□□□ -0.54
RC3H2-201ENST00000335387 SPSB4Q96A44 273 aa11.65□□□□□ -0.54
RC3H2-201ENST00000335387 NARS2Q96I59 477 aaKnown RBP11.65□□□□□ -0.54
RC3H2-201ENST00000335387 SCRT1Q9BWW7 348 aa11.65□□□□□ -0.54
RC3H2-201ENST00000335387 TLNRD1Q9H1K6 362 aa11.65□□□□□ -0.54
RC3H2-201ENST00000335387 C11orf1Q9H5F2 150 aa11.65□□□□□ -0.54
RC3H2-201ENST00000335387 PLA2G2EQ9NZK7 142 aa11.65□□□□□ -0.54
RC3H2-201ENST00000335387 FAHP16930 419 aa11.65□□□□□ -0.54
RC3H2-201ENST00000335387 HOXA1P49639 335 aaPredicted RBP11.65□□□□□ -0.54
RC3H2-201ENST00000335387 TMEM187Q14656 261 aa11.65□□□□□ -0.54
RC3H2-201ENST00000335387 RIPPLY2Q5TAB7 128 aa11.65□□□□□ -0.54
RC3H2-201ENST00000335387 ST6GALNAC5Q9BVH7 336 aa11.65□□□□□ -0.54
RC3H2-201ENST00000335387 STARD10Q9Y365 291 aa11.65□□□□□ -0.54
RC3H2-201ENST00000335387 TNRC6AQ8NDV7 1962 aaKnown RBP11.65□□□□□ -0.55
RC3H2-201ENST00000335387 A0A1B0GW64 132 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 FBXO24O75426 580 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 CBR3O75828 277 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 SFTPDP35247 375 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 RAC3P60763 192 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 ZFP36L1Q07352 338 aaKnown RBP11.64□□□□□ -0.55
RC3H2-201ENST00000335387 CNN3Q15417 329 aaKnown RBP11.64□□□□□ -0.55
RC3H2-201ENST00000335387 SNAI3Q3KNW1 292 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 ADGRG7Q96K78 797 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 METTL9Q9H1A3 318 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 LIME1Q9H400 295 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 ZFP57Q9NU63 452 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 HPF1Q9NWY4 346 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 PILRBQ9UKJ0 227 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 IGKV1-27A0A075B6S5 117 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 PQLC2LA1A4F0 135 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 ZNF716A6NP11 495 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 ATXN8OSP0DMR3 200 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 RFC3P40938 356 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 H3F3CQ6NXT2 135 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 RELTQ969Z4 430 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 GINS3Q9BRX5 216 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 SUCNR1Q9BXA5 334 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 RHOFQ9HBH0 211 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 TAF9BQ9HBM6 251 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 PLSCR2Q9NRY7 297 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 TMEM38BQ9NVV0 291 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 NECAP2Q9NVZ3 263 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 OCIAD1Q9NX40 245 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 NCKAP5O14513 1909 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 CACNA1EQ15878 2313 aa11.64□□□□□ -0.55
RC3H2-201ENST00000335387 NCOR1O75376 2440 aa11.63□□□□□ -0.55
RC3H2-201ENST00000335387 FAM90A10PA6NDY2 464 aa11.63□□□□□ -0.55
RC3H2-201ENST00000335387 FAM90A18PA6NE21 464 aa11.63□□□□□ -0.55
RC3H2-201ENST00000335387 FAM90A16PA6NEW6 464 aa11.63□□□□□ -0.55
RC3H2-201ENST00000335387 FAM90A20PA6NIJ5 464 aa11.63□□□□□ -0.55
RC3H2-201ENST00000335387 FAM90A8PA6NJQ4 464 aa11.63□□□□□ -0.55
RC3H2-201ENST00000335387 FAM90A7PA6NKC0 464 aa11.63□□□□□ -0.55
RC3H2-201ENST00000335387 FAM90A22PA8MWA6 464 aa11.63□□□□□ -0.55
RC3H2-201ENST00000335387 FAM90A12PA8MX19 464 aa11.63□□□□□ -0.55
RC3H2-201ENST00000335387 FAM90A5PA8MXJ8 464 aa11.63□□□□□ -0.55
RC3H2-201ENST00000335387 FAM90A23PA8MXZ1 464 aa11.63□□□□□ -0.55
RC3H2-201ENST00000335387 FAM90A15PP0C7V4 464 aa11.63□□□□□ -0.55
RC3H2-201ENST00000335387 FAM90A13PP0C7W8 464 aa11.63□□□□□ -0.55
RC3H2-201ENST00000335387 FAM90A14PP0C7W9 464 aa11.63□□□□□ -0.55
RC3H2-201ENST00000335387 FAM90A24PP0C7X0 464 aa11.63□□□□□ -0.55
RC3H2-201ENST00000335387 CCL3P10147 92 aa11.63□□□□□ -0.55
RC3H2-201ENST00000335387 ACKR3P25106 362 aa11.63□□□□□ -0.55
RC3H2-201ENST00000335387 GUCA1AP43080 201 aaPredicted RBP11.63□□□□□ -0.55
RC3H2-201ENST00000335387 CXCL12P48061 93 aa11.63□□□□□ -0.55
RC3H2-201ENST00000335387 SSR4P51571 173 aa11.63□□□□□ -0.55
RC3H2-201ENST00000335387 DAZAP2Q15038 168 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms