RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 LIMS3P0CW19 117 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 LIMS4P0CW20 117 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 PTGFRP43088 359 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 MOB3BQ86TA1 216 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 D2HGDHQ8N465 521 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 SRPK3Q9UPE1 567 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 TRAV39A0A0B4J263 110 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 TMEM238LA0A1B0GVL6 79 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 RBFOX3A6NFN3 312 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 A6NJY4 79 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 DEFB108AA8MXU0 73 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 PTGESO14684 152 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 F12P00748 615 aaPredicted RBP11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 NPBWR2P48146 333 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 WNT3P56703 355 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 NSUN5P2Q63ZY6 315 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 CXorf67Q86X51 503 aaPredicted RBP11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 ANAPC13Q9BS18 74 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 P2RY12Q9H244 342 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 C9orf170A2RU37 121 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 M0R135 149 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 PLPP1O14494 284 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 EIF1BO60739 113 aaKnown RBP11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 HTRA3P83110 453 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 RNF133Q8WVZ7 376 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 ZNF799Q96GE5 643 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 GABARAPL3Q9BY60 117 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 DNAJC13O75165 2243 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 M0R1B8 84 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 ANAPC16Q96DE5 110 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 PDLIM5Q96HC4 596 aaKnown RBP11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 AURKAIP1Q9NWT8 199 aaPredicted RBP11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 A4GNTQ9UNA3 340 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 NEURL4Q96JN8 1562 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 IGF2P01344 180 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 ANKRD34CP0C6C1 535 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 MPV17LQ2QL34 196 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 RTN4RL1Q86UN2 441 aaPredicted RBP11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 ATP23Q9Y6H3 246 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 CST4P01036 141 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 TMEM40Q8WWA1 233 aa11.49□□□□□ -0.57
RAB11FIP1-202ENST00000330843 IFT172Q9UG01 1749 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 CORTO00230 105 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 SLC6A1P30531 599 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 SLC48A1Q6P1K1 146 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 OR1B1Q8NGR6 318 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 BOD1Q96IK1 185 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 SLC45A2Q9UMX9 530 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 MPDZO75970 2070 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 OR2W5A6NFC9 320 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 EIF3GO75821 320 aaKnown RBP eCLIP11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 KLF7O75840 302 aaPredicted RBP11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 RBPJQ06330 500 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 IL24Q13007 206 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 C12orf54Q6X4T0 127 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 LINC00299Q6ZSB3 139 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 OSR2Q8N2R0 312 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 GMPPAQ96IJ6 420 aaPredicted RBP11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 CMC2Q9NRP2 79 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 R4GMQ9 66 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 HPXP02790 462 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 LIM2P55344 173 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 SLC25A26Q70HW3 274 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 MYOZ3Q8TDC0 251 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 MDKP21741 143 aaPredicted RBP11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 FAHD2BQ6P2I3 314 aaPredicted RBP11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 LYPD8Q6UX82 237 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 C5orf17Q8NAS9 161 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 MARCH5Q9NX47 278 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 ZMIZ1Q9ULJ6 1067 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 RHOBP62745 196 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 HLA-DRB3P79483 266 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 PPP1R1AQ13522 171 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 CTF1Q16619 201 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 GSG1Q2KHT4 349 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 PLA1AQ53H76 456 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 DCAF12Q5T6F0 453 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 LINC00518Q8N0U6 118 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 DERL1Q9BUN8 251 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 KLF16Q9BXK1 252 aaPredicted RBP11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 Q9Y3F1 56 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 TRIP12Q14669 1992 aaPredicted RBP11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 ZNF716A6NP11 495 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 GNG7O60262 68 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 RPL18Q07020 188 aaKnown RBP11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 AMMECR1LQ6DCA0 310 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 HIST1H4GQ99525 98 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 TWSG1Q9GZX9 223 aa11.48□□□□□ -0.57
RAB11FIP1-202ENST00000330843 A0A0B4J293 547 aa11.47□□□□□ -0.57
RAB11FIP1-202ENST00000330843 KCNAB3O43448 404 aa11.47□□□□□ -0.57
RAB11FIP1-202ENST00000330843 VAMP5O95183 116 aa11.47□□□□□ -0.57
RAB11FIP1-202ENST00000330843 MT-ATP6P00846 226 aa11.47□□□□□ -0.57
RAB11FIP1-202ENST00000330843 APCSP02743 223 aa11.47□□□□□ -0.57
RAB11FIP1-202ENST00000330843 ORM2P19652 201 aa11.47□□□□□ -0.57
RAB11FIP1-202ENST00000330843 BSGP35613 385 aa11.47□□□□□ -0.57
RAB11FIP1-202ENST00000330843 SELENOPP49908 381 aa11.47□□□□□ -0.57
RAB11FIP1-202ENST00000330843 BSXQ3C1V8 233 aa11.47□□□□□ -0.57
RAB11FIP1-202ENST00000330843 MRPL54Q6P161 138 aaKnown RBP11.47□□□□□ -0.57
RAB11FIP1-202ENST00000330843 TMEM207Q6UWW9 146 aa11.47□□□□□ -0.57
RAB11FIP1-202ENST00000330843 ZNF683Q8IZ20 524 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms