RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 BVESQ8NE79 360 aa12.66□□□□□ -0.38
TPM3-206ENST00000330188 PXT1Q8NFP0 134 aa12.66□□□□□ -0.38
TPM3-206ENST00000330188 OR2M7Q8NG81 312 aa12.66□□□□□ -0.38
TPM3-206ENST00000330188 TMEM45BQ96B21 275 aa12.66□□□□□ -0.38
TPM3-206ENST00000330188 HDHD3Q9BSH5 251 aaPredicted RBP12.66□□□□□ -0.38
TPM3-206ENST00000330188 ZNF391Q9UJN7 358 aa12.66□□□□□ -0.38
TPM3-206ENST00000330188 TRBV6-7A0A0A0MS04 114 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 hCG_38984A0A1B0GV85 526 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 B8ZZF3 427 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 PLATP00750 562 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 RBP2P50120 134 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 FAM3AP98173 230 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 CYCSP99999 105 aaKnown RBP12.65□□□□□ -0.38
TPM3-206ENST00000330188 RSU1Q15404 277 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 PDSS1Q5T2R2 415 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 RPUSD3Q6P087 351 aaKnown RBP12.65□□□□□ -0.38
TPM3-206ENST00000330188 ASCL4Q6XD76 172 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 LHFPL2Q6ZUX7 228 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 ZNF100Q8IYN0 542 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 BORCS8Q96FH0 119 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 CPNE2Q96FN4 548 aaPredicted RBP12.65□□□□□ -0.38
TPM3-206ENST00000330188 SIGLEC12Q96PQ1 595 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 FAM173AQ9BQD7 235 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 RNF126Q9BV68 326 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 LGALS8O00214 317 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 TERTO14746 1132 aaKnown RBP12.65□□□□□ -0.38
TPM3-206ENST00000330188 RRP8O43159 456 aaKnown RBP12.65□□□□□ -0.38
TPM3-206ENST00000330188 KCNAB3O43448 404 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 NRASP01111 189 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 CSTBP04080 98 aaKnown RBP12.65□□□□□ -0.38
TPM3-206ENST00000330188 MMP7P09237 267 aaPredicted RBP12.65□□□□□ -0.38
TPM3-206ENST00000330188 NUP62P37198 522 aaPredicted RBP12.65□□□□□ -0.38
TPM3-206ENST00000330188 RFC3P40938 356 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 ZNF92Q03936 586 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 SURF2Q15527 256 aaPredicted RBP12.65□□□□□ -0.38
TPM3-206ENST00000330188 TSPO2Q5TGU0 170 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 EIF4E3Q8N5X7 224 aaKnown RBP12.65□□□□□ -0.38
TPM3-206ENST00000330188 ZSCAN4Q8NAM6 433 aaPredicted RBP12.65□□□□□ -0.38
TPM3-206ENST00000330188 DCUN1D4Q92564 292 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 PHYHIPLQ96FC7 376 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 MICU1Q9BPX6 476 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 RGCCQ9H4X1 137 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 ZNF703Q9H7S9 590 aaPredicted RBP12.65□□□□□ -0.38
TPM3-206ENST00000330188 ZNF581Q9P0T4 197 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 GPR160Q9UJ42 338 aa12.65□□□□□ -0.38
TPM3-206ENST00000330188 WDFY4Q6ZS81 3184 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 IGKV3D-15A0A087WSY6 115 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 MPTX1A8MV57 137 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 H0YIZ8 118 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 LINC01387J3KSC0 135 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 SP9P0CG40 484 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 TAF9Q16594 264 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 MOB3CQ70IA8 216 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 GALNT11Q8NCW6 608 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 ARPC5LQ9BPX5 153 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 FAAP24Q9BTP7 215 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 HES7Q9BYE0 225 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 HSF4Q9ULV5 492 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 NOSIPQ9Y314 301 aaKnown RBP12.64□□□□□ -0.39
TPM3-206ENST00000330188 KMT2EQ8IZD2 1858 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 KRBOX1C9JBD0 128 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 F5H0A9 414 aaPredicted RBP12.64□□□□□ -0.39
TPM3-206ENST00000330188 IGHV3-9P01782 118 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 CELA3AP09093 270 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 EDN3P14138 238 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 PGAM2P15259 253 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 LHX2P50458 406 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 OR8B8Q15620 311 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 TUSC1Q2TAM9 212 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 CDCP2Q5VXM1 449 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 ZNF2Q9BSG1 426 aaPredicted RBP12.64□□□□□ -0.39
TPM3-206ENST00000330188 BARX1Q9HBU1 254 aaPredicted RBP12.64□□□□□ -0.39
TPM3-206ENST00000330188 AK3Q9UIJ7 227 aa12.64□□□□□ -0.39
TPM3-206ENST00000330188 IGKV1-12A0A0C4DH73 117 aa12.63□□□□□ -0.39
TPM3-206ENST00000330188 FARS2O95363 451 aaKnown RBP12.63□□□□□ -0.39
TPM3-206ENST00000330188 IGKV1D-12P01611 117 aa12.63□□□□□ -0.39
TPM3-206ENST00000330188 CD59P13987 128 aa12.63□□□□□ -0.39
TPM3-206ENST00000330188 CHATP28329 748 aa12.63□□□□□ -0.39
TPM3-206ENST00000330188 PTGER4P35408 488 aa12.63□□□□□ -0.39
TPM3-206ENST00000330188 NRN1LQ496H8 165 aa12.63□□□□□ -0.39
TPM3-206ENST00000330188 PABPC1L2AQ5JQF8 200 aa12.63□□□□□ -0.39
TPM3-206ENST00000330188 ABHD17BQ5VST6 288 aa12.63□□□□□ -0.39
TPM3-206ENST00000330188 OR10C1Q96KK4 312 aa12.63□□□□□ -0.39
TPM3-206ENST00000330188 GPR87Q9BY21 358 aa12.63□□□□□ -0.39
TPM3-206ENST00000330188 ANXA10Q9UJ72 324 aa12.63□□□□□ -0.39
TPM3-206ENST00000330188 EDARQ9UNE0 448 aa12.63□□□□□ -0.39
TPM3-206ENST00000330188 C14orf166Q9Y224 244 aaKnown RBP12.63□□□□□ -0.39
TPM3-206ENST00000330188 TEX13DA0A0J9YY54 714 aaPredicted RBP12.62□□□□□ -0.39
TPM3-206ENST00000330188 ZNF587BE7ETH6 402 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 MRPL33O75394 65 aaKnown RBP12.62□□□□□ -0.39
TPM3-206ENST00000330188 LYL1P12980 280 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 ECI1P42126 302 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 CLDN18P56856 261 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 SRYQ05066 204 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 SNTB1Q13884 538 aaKnown RBP12.62□□□□□ -0.39
TPM3-206ENST00000330188 UNQ6126/PRO20091Q6UXV3 157 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 CPEB3Q8NE35 698 aaKnown RBP12.62□□□□□ -0.39
TPM3-206ENST00000330188 SPSB4Q96A44 273 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 RRNAD1Q96FB5 475 aaKnown RBP12.62□□□□□ -0.39
TPM3-206ENST00000330188 SULT4A1Q9BR01 284 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms