RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 STARD10Q9Y365 291 aa17.52■□□□□ 0.39
RIPPLY3-201ENST00000329553 A0A1W2PR80 420 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 MBD3L4A6NDZ8 208 aaPredicted RBP17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 MBD3L3A6NE82 208 aaPredicted RBP17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 MBD3L5A6NJ08 208 aaPredicted RBP17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 ARPC5O15511 151 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 B3GALNT1O75752 331 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 TNFSF13O75888 250 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 CNOT4O95628 575 aaKnown RBP17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 TSC22D1Q15714 1073 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 GABRA6Q16445 453 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 CLVS2Q5SYC1 327 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 TMUB2Q71RG4 321 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 OR2W3Q7Z3T1 314 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 MBD3L2Q8NHZ7 208 aaPredicted RBP17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 APOBEC3DQ96AK3 386 aaPredicted RBP17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 CMBLQ96DG6 245 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 CCDC120Q96HB5 630 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 REPIN1Q9BWE0 567 aaKnown RBP17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 BANF2Q9H503 90 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 NRASP01111 189 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 SERPINA5P05154 406 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 FCER2P06734 321 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 NAT2P11245 290 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 APLNRP35414 380 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 GK2Q14410 553 aaPredicted RBP17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 TMEM65Q6PI78 240 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 FAM180AQ6UWF9 173 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 KCNG3Q8TAE7 436 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 TNFAIP8L1Q8WVP5 186 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 LPAR5Q9H1C0 372 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 MED9Q9NWA0 146 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 RDH8Q9NYR8 311 aa17.51■□□□□ 0.39
RIPPLY3-201ENST00000329553 INTS1Q8N201 2190 aaKnown RBP17.5■□□□□ 0.39
RIPPLY3-201ENST00000329553 MPIG6BO95866 241 aa17.5■□□□□ 0.39
RIPPLY3-201ENST00000329553 CALCRP30988 508 aa17.5■□□□□ 0.39
RIPPLY3-201ENST00000329553 ALDH3B1P43353 468 aa17.5■□□□□ 0.39
RIPPLY3-201ENST00000329553 SLC22A6Q4U2R8 563 aa17.5■□□□□ 0.39
RIPPLY3-201ENST00000329553 KRTCAP3Q53RY4 240 aa17.5■□□□□ 0.39
RIPPLY3-201ENST00000329553 ZNF324BQ6AW86 544 aaPredicted RBP17.5■□□□□ 0.39
RIPPLY3-201ENST00000329553 RAB12Q6IQ22 244 aa17.5■□□□□ 0.39
RIPPLY3-201ENST00000329553 SPSB1Q96BD6 273 aa17.5■□□□□ 0.39
RIPPLY3-201ENST00000329553 STARD4Q96DR4 205 aa17.5■□□□□ 0.39
RIPPLY3-201ENST00000329553 NICN1Q9BSH3 213 aa17.5■□□□□ 0.39
RIPPLY3-201ENST00000329553 REG4Q9BYZ8 158 aa17.5■□□□□ 0.39
RIPPLY3-201ENST00000329553 ZNF107Q9UII5 783 aaPredicted RBP17.5■□□□□ 0.39
RIPPLY3-201ENST00000329553 BSNQ9UPA5 3926 aa17.5■□□□□ 0.39
RIPPLY3-201ENST00000329553 FAM230AA0A1W2PPH8 454 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 hCG_1807616A0A1W2PRN6 198 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 H3BUI4 141 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 CDC14BO60729 498 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 RP2O75695 350 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 SCO1O75880 301 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 RAB3DO95716 219 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 UBBP0CG47 229 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 MTCP1P56278 107 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 C4orf46Q504U0 113 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 PIGCQ92535 297 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 SLC25A21Q9BQT8 299 aaPredicted RBP17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 POFUT1Q9H488 388 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 FAM215AQ9Y5M1 114 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 A0A0A6YYD4 124 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 PPP3CBP16298 524 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 WNT5AP41221 380 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 UBE2NP61088 152 aaKnown RBP17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 ZNF260Q3ZCT1 412 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 CD163Q86VB7 1156 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 RPRMLQ8N4K4 120 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 ZNF610Q8N9Z0 462 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 Q8NA96 180 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 SLC30A7Q8NEW0 376 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 CCDC107Q8WV48 283 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 MYOZ1Q9NP98 299 aaPredicted RBP17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 RAXQ9Y2V3 346 aa17.49■□□□□ 0.39
RIPPLY3-201ENST00000329553 IGKV1-27A0A075B6S5 117 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 ZNF816-ZNF321PA0A0X1KG74 233 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 TMEM235A6NFC5 223 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 WDR1O75083 606 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 CRTAPO75718 401 aaPredicted RBP17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 CGAP01215 116 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 CD74P04233 296 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 NMBP08949 121 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 ZNF735P0CB33 412 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 PRKACBP22694 351 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 MALLQ13021 153 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 CNN3Q15417 329 aaKnown RBP17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 RGS7BPQ6MZT1 257 aaPredicted RBP17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 MYPOPQ86VE0 399 aaPredicted RBP17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 SLC38A6Q8IZM9 456 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 CHST4Q8NCG5 386 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 AQP3Q92482 292 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 TMEM59Q9BXS4 323 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 GHRLQ9UBU3 117 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 FXYD6-FXYD2A0A087WZ82 144 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 LOC105371267A0A1B0GV96 52 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 MFSD2BA6NFX1 497 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 CELA3BP08861 270 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 OR4E1P0C645 316 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 ZNF14P17017 642 aaPredicted RBP17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 COX5AP20674 150 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms