RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 C10orf35Q96D05 121 aa22.84■■□□□ 1.25
ATPAF1-201ENST00000329231 DMRTB1Q96MA1 342 aa22.84■■□□□ 1.25
ATPAF1-201ENST00000329231 GAFA1Q96PS6 74 aa22.84■■□□□ 1.25
ATPAF1-201ENST00000329231 SLC7A11Q9UPY5 501 aa22.84■■□□□ 1.25
ATPAF1-201ENST00000329231 LOC107986453A0A1B0GWG9 222 aa22.83■■□□□ 1.25
ATPAF1-201ENST00000329231 H3BSH0 61 aa22.83■■□□□ 1.25
ATPAF1-201ENST00000329231 SIGLEC5O15389 551 aa22.83■■□□□ 1.25
ATPAF1-201ENST00000329231 GATBO75879 557 aaKnown RBP22.83■■□□□ 1.25
ATPAF1-201ENST00000329231 SFTPBP07988 381 aa22.83■■□□□ 1.25
ATPAF1-201ENST00000329231 ACAA1P09110 424 aaPredicted RBP22.83■■□□□ 1.25
ATPAF1-201ENST00000329231 MMP9P14780 707 aa22.83■■□□□ 1.25
ATPAF1-201ENST00000329231 GABRA2P47869 451 aa22.83■■□□□ 1.25
ATPAF1-201ENST00000329231 ACTG1P63261 375 aa22.83■■□□□ 1.25
ATPAF1-201ENST00000329231 TMEM244Q5VVB8 128 aa22.83■■□□□ 1.25
ATPAF1-201ENST00000329231 FDX2Q6P4F2 183 aa22.83■■□□□ 1.25
ATPAF1-201ENST00000329231 SETD9Q8NE22 299 aa22.83■■□□□ 1.25
ATPAF1-201ENST00000329231 RNF166Q96A37 237 aaPredicted RBP22.83■■□□□ 1.25
ATPAF1-201ENST00000329231 RPL36Q9Y3U8 105 aaKnown RBP22.83■■□□□ 1.25
ATPAF1-201ENST00000329231 H0YHG0 523 aa22.82■■□□□ 1.24
ATPAF1-201ENST00000329231 WBP4O75554 376 aaKnown RBP22.82■■□□□ 1.24
ATPAF1-201ENST00000329231 CLIC3O95833 236 aa22.82■■□□□ 1.24
ATPAF1-201ENST00000329231 FADS2O95864 444 aaKnown RBP22.82■■□□□ 1.24
ATPAF1-201ENST00000329231 SERPINA3P01011 423 aa22.82■■□□□ 1.24
ATPAF1-201ENST00000329231 PSG2P11465 335 aa22.82■■□□□ 1.24
ATPAF1-201ENST00000329231 ARF6P62330 175 aa22.82■■□□□ 1.24
ATPAF1-201ENST00000329231 UBA52P62987 128 aaKnown RBP22.82■■□□□ 1.24
ATPAF1-201ENST00000329231 IL18R1Q13478 541 aa22.82■■□□□ 1.24
ATPAF1-201ENST00000329231 PDCD1Q15116 288 aa22.82■■□□□ 1.24
ATPAF1-201ENST00000329231 SMIM21Q3B7S5 101 aa22.82■■□□□ 1.24
ATPAF1-201ENST00000329231 LY6G5BQ8NDX9 201 aa22.82■■□□□ 1.24
ATPAF1-201ENST00000329231 ZNF48Q96MX3 618 aaPredicted RBP22.82■■□□□ 1.24
ATPAF1-201ENST00000329231 TBX15Q96SF7 602 aa22.82■■□□□ 1.24
ATPAF1-201ENST00000329231 SIRPDQ9H106 197 aa22.82■■□□□ 1.24
ATPAF1-201ENST00000329231 AMBNQ9NP70 447 aa22.82■■□□□ 1.24
ATPAF1-201ENST00000329231 SLC25A10Q9UBX3 287 aaPredicted RBP22.82■■□□□ 1.24
ATPAF1-201ENST00000329231 KPTNQ9Y664 436 aa22.82■■□□□ 1.24
ATPAF1-201ENST00000329231 IGKV1D-17A0A075B6S4 117 aa22.81■■□□□ 1.24
ATPAF1-201ENST00000329231 H0YAE9 185 aa22.81■■□□□ 1.24
ATPAF1-201ENST00000329231 J3QLW9 94 aa22.81■■□□□ 1.24
ATPAF1-201ENST00000329231 SYNGR1O43759 233 aa22.81■■□□□ 1.24
ATPAF1-201ENST00000329231 NOS1APO75052 506 aaPredicted RBP22.81■■□□□ 1.24
ATPAF1-201ENST00000329231 HTR1AP08908 422 aa22.81■■□□□ 1.24
ATPAF1-201ENST00000329231 PGA5P0DJD9 388 aa22.81■■□□□ 1.24
ATPAF1-201ENST00000329231 SELLP14151 372 aa22.81■■□□□ 1.24
ATPAF1-201ENST00000329231 ZNF19P17023 458 aa22.81■■□□□ 1.24
ATPAF1-201ENST00000329231 CAPGP40121 348 aa22.81■■□□□ 1.24
ATPAF1-201ENST00000329231 RAB40BQ12829 278 aa22.81■■□□□ 1.24
ATPAF1-201ENST00000329231 BAMBIQ13145 260 aa22.81■■□□□ 1.24
ATPAF1-201ENST00000329231 GALEQ14376 348 aa22.81■■□□□ 1.24
ATPAF1-201ENST00000329231 DGUOKQ16854 277 aa22.81■■□□□ 1.24
ATPAF1-201ENST00000329231 ACP7Q6ZNF0 438 aa22.81■■□□□ 1.24
ATPAF1-201ENST00000329231 EGFL6Q8IUX8 553 aa22.81■■□□□ 1.24
ATPAF1-201ENST00000329231 RDH10Q8IZV5 341 aa22.81■■□□□ 1.24
ATPAF1-201ENST00000329231 C4orf36Q96KX1 117 aa22.81■■□□□ 1.24
ATPAF1-201ENST00000329231 DCTN5Q9BTE1 182 aa22.81■■□□□ 1.24
ATPAF1-201ENST00000329231 CHST5Q9GZS9 411 aa22.81■■□□□ 1.24
ATPAF1-201ENST00000329231 ZMAT3Q9HA38 289 aaKnown RBP22.81■■□□□ 1.24
ATPAF1-201ENST00000329231 INPP5EQ9NRR6 644 aa22.81■■□□□ 1.24
ATPAF1-201ENST00000329231 FRRS1LQ9P0K9 344 aa22.81■■□□□ 1.24
ATPAF1-201ENST00000329231 TFF1P04155 84 aa22.8■■□□□ 1.24
ATPAF1-201ENST00000329231 ISG15P05161 165 aa22.8■■□□□ 1.24
ATPAF1-201ENST00000329231 MPZP25189 248 aa22.8■■□□□ 1.24
ATPAF1-201ENST00000329231 CCR9P51686 369 aa22.8■■□□□ 1.24
ATPAF1-201ENST00000329231 CAV3P56539 151 aa22.8■■□□□ 1.24
ATPAF1-201ENST00000329231 UBE2V2Q15819 145 aa22.8■■□□□ 1.24
ATPAF1-201ENST00000329231 BRD3OSQ6XYD6 125 aa22.8■■□□□ 1.24
ATPAF1-201ENST00000329231 CMTM4Q8IZR5 234 aa22.8■■□□□ 1.24
ATPAF1-201ENST00000329231 C8orf46Q8TAG6 207 aa22.8■■□□□ 1.24
ATPAF1-201ENST00000329231 TRMT10AQ8TBZ6 339 aaKnown RBP22.8■■□□□ 1.24
ATPAF1-201ENST00000329231 PP6455Q8WZ26 134 aa22.8■■□□□ 1.24
ATPAF1-201ENST00000329231 H1FXQ92522 213 aaKnown RBP22.8■■□□□ 1.24
ATPAF1-201ENST00000329231 ALG8Q9BVK2 526 aa22.8■■□□□ 1.24
ATPAF1-201ENST00000329231 PKIBQ9C010 78 aa22.8■■□□□ 1.24
ATPAF1-201ENST00000329231 MRPS18AQ9NVS2 196 aaKnown RBP22.8■■□□□ 1.24
ATPAF1-201ENST00000329231 ZNF222Q9UK12 451 aa22.8■■□□□ 1.24
ATPAF1-201ENST00000329231 HSPE1-MOB4S4R3N1 261 aa22.8■■□□□ 1.24
ATPAF1-201ENST00000329231 FAM230AA0A1W2PPH8 454 aa22.79■■□□□ 1.24
ATPAF1-201ENST00000329231 NXPH2O95156 264 aa22.79■■□□□ 1.24
ATPAF1-201ENST00000329231 NDUFB7P17568 137 aa22.79■■□□□ 1.24
ATPAF1-201ENST00000329231 PRTN3P24158 256 aa22.79■■□□□ 1.24
ATPAF1-201ENST00000329231 FUT6P51993 359 aa22.79■■□□□ 1.24
ATPAF1-201ENST00000329231 KLHL22Q53GT1 634 aa22.79■■□□□ 1.24
ATPAF1-201ENST00000329231 LHFPL3Q86UP9 236 aa22.79■■□□□ 1.24
ATPAF1-201ENST00000329231 SYS1Q8N2H4 156 aa22.79■■□□□ 1.24
ATPAF1-201ENST00000329231 CNIH3Q8TBE1 160 aa22.79■■□□□ 1.24
ATPAF1-201ENST00000329231 NPRL2Q8WTW4 380 aa22.79■■□□□ 1.24
ATPAF1-201ENST00000329231 NRG4Q8WWG1 115 aa22.79■■□□□ 1.24
ATPAF1-201ENST00000329231 GCDHQ92947 438 aaPredicted RBP22.79■■□□□ 1.24
ATPAF1-201ENST00000329231 PELI1Q96FA3 418 aa22.79■■□□□ 1.24
ATPAF1-201ENST00000329231 SDSLQ96GA7 329 aa22.79■■□□□ 1.24
ATPAF1-201ENST00000329231 ZNF488Q96MN9 340 aa22.79■■□□□ 1.24
ATPAF1-201ENST00000329231 ONECUT1Q9UBC0 465 aa22.79■■□□□ 1.24
ATPAF1-201ENST00000329231 MYRFQ9Y2G1 1151 aa22.79■■□□□ 1.24
ATPAF1-201ENST00000329231 CENPVL3A0A0U1RRI6 287 aa22.78■■□□□ 1.24
ATPAF1-201ENST00000329231 DNAJC9-AS1A6NH13 148 aa22.78■■□□□ 1.24
ATPAF1-201ENST00000329231 IGHA1P01876 353 aa22.78■■□□□ 1.24
ATPAF1-201ENST00000329231 NANOS3P60323 173 aaKnown RBP22.78■■□□□ 1.24
ATPAF1-201ENST00000329231 IL24Q13007 206 aa22.78■■□□□ 1.24
ATPAF1-201ENST00000329231 CNN3Q15417 329 aaKnown RBP22.78■■□□□ 1.24
ATPAF1-201ENST00000329231 SMN1Q16637 294 aaKnown RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms