RNA–Protein interactions for RNA: ENST00000328596.10

TNFRSF18-201, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TNFRSF18, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-201ENST00000328596 LIMS3P0CW19 117 aa17.35■□□□□ 0.37
TNFRSF18-201ENST00000328596 LIMS4P0CW20 117 aa17.35■□□□□ 0.37
TNFRSF18-201ENST00000328596 ZNF19P17023 458 aa17.35■□□□□ 0.37
TNFRSF18-201ENST00000328596 AMY2BP19961 511 aa17.35■□□□□ 0.37
TNFRSF18-201ENST00000328596 GLRA1P23415 457 aa17.35■□□□□ 0.37
TNFRSF18-201ENST00000328596 FDX2Q6P4F2 183 aa17.35■□□□□ 0.37
TNFRSF18-201ENST00000328596 HAGHLQ6PII5 290 aaPredicted RBP17.35■□□□□ 0.37
TNFRSF18-201ENST00000328596 DUX4L9Q6RFH8 374 aaPredicted RBP17.35■□□□□ 0.37
TNFRSF18-201ENST00000328596 BTN2A1Q7KYR7 527 aa17.35■□□□□ 0.37
TNFRSF18-201ENST00000328596 BCL6BQ8N143 479 aaPredicted RBP17.35■□□□□ 0.37
TNFRSF18-201ENST00000328596 FAM216BQ8N7L0 139 aa17.35■□□□□ 0.37
TNFRSF18-201ENST00000328596 BPIFB6Q8NFQ5 453 aa17.35■□□□□ 0.37
TNFRSF18-201ENST00000328596 AQP3Q92482 292 aa17.35■□□□□ 0.37
TNFRSF18-201ENST00000328596 TMEM80Q96HE8 168 aa17.35■□□□□ 0.37
TNFRSF18-201ENST00000328596 MS4A7Q9GZW8 240 aaPredicted RBP17.35■□□□□ 0.37
TNFRSF18-201ENST00000328596 GPR173Q9NS66 373 aa17.35■□□□□ 0.37
TNFRSF18-201ENST00000328596 DUX4Q9UBX2 424 aa17.35■□□□□ 0.37
TNFRSF18-201ENST00000328596 EXOSC1Q9Y3B2 195 aaKnown RBP17.35■□□□□ 0.37
TNFRSF18-201ENST00000328596 IGHV3OR16-10A0A075B7F0 116 aa17.34■□□□□ 0.37
TNFRSF18-201ENST00000328596 TRAV40A0A0B4J280 105 aa17.34■□□□□ 0.37
TNFRSF18-201ENST00000328596 A6NIN4 97 aa17.34■□□□□ 0.37
TNFRSF18-201ENST00000328596 ZNF879B4DU55 563 aa17.34■□□□□ 0.37
TNFRSF18-201ENST00000328596 TRIM77I1YAP6 450 aa17.34■□□□□ 0.37
TNFRSF18-201ENST00000328596 SYT7O43581 403 aa17.34■□□□□ 0.37
TNFRSF18-201ENST00000328596 PLATP00750 562 aa17.34■□□□□ 0.37
TNFRSF18-201ENST00000328596 TGM4P49221 684 aa17.34■□□□□ 0.37
TNFRSF18-201ENST00000328596 ST3GAL4Q11206 333 aa17.34■□□□□ 0.37
TNFRSF18-201ENST00000328596 MRPL28Q13084 256 aaKnown RBP17.34■□□□□ 0.37
TNFRSF18-201ENST00000328596 MED21Q13503 144 aa17.34■□□□□ 0.37
TNFRSF18-201ENST00000328596 RBMS3Q6XE24 437 aaKnown RBP17.34■□□□□ 0.37
TNFRSF18-201ENST00000328596 PRSS35Q8N3Z0 413 aa17.34■□□□□ 0.37
TNFRSF18-201ENST00000328596 SIGLECL1Q8N7X8 197 aa17.34■□□□□ 0.37
TNFRSF18-201ENST00000328596 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.34■□□□□ 0.37
TNFRSF18-201ENST00000328596 CCDC54Q8NEL0 328 aa17.34■□□□□ 0.37
TNFRSF18-201ENST00000328596 ANGPTL6Q8NI99 470 aa17.34■□□□□ 0.37
TNFRSF18-201ENST00000328596 HAVCR2Q8TDQ0 301 aa17.34■□□□□ 0.37
TNFRSF18-201ENST00000328596 RNF166Q96A37 237 aaPredicted RBP17.34■□□□□ 0.37
TNFRSF18-201ENST00000328596 PELI1Q96FA3 418 aa17.34■□□□□ 0.37
TNFRSF18-201ENST00000328596 ZNF184Q99676 751 aaPredicted RBP17.34■□□□□ 0.37
TNFRSF18-201ENST00000328596 PLEKHA1Q9HB21 404 aa17.34■□□□□ 0.37
TNFRSF18-201ENST00000328596 NLKQ9UBE8 527 aa17.34■□□□□ 0.37
TNFRSF18-201ENST00000328596 NKX6-3A6NJ46 265 aa17.33■□□□□ 0.36
TNFRSF18-201ENST00000328596 GPR37O15354 613 aa17.33■□□□□ 0.36
TNFRSF18-201ENST00000328596 NDUFB3O43676 98 aa17.33■□□□□ 0.36
TNFRSF18-201ENST00000328596 MYL12AP19105 171 aa17.33■□□□□ 0.36
TNFRSF18-201ENST00000328596 ETV1P50549 477 aa17.33■□□□□ 0.36
TNFRSF18-201ENST00000328596 IKZF1Q13422 519 aa17.33■□□□□ 0.36
TNFRSF18-201ENST00000328596 LRRC10Q5BKY1 277 aa17.33■□□□□ 0.36
TNFRSF18-201ENST00000328596 ZNF788Q6ZQV5 615 aa17.33■□□□□ 0.36
TNFRSF18-201ENST00000328596 C9orf139Q6ZV77 190 aa17.33■□□□□ 0.36
TNFRSF18-201ENST00000328596 ZNF573Q86YE8 665 aa17.33■□□□□ 0.36
TNFRSF18-201ENST00000328596 FGFRL1Q8N441 504 aa17.33■□□□□ 0.36
TNFRSF18-201ENST00000328596 OR2G2Q8NGZ5 317 aa17.33■□□□□ 0.36
TNFRSF18-201ENST00000328596 TMIGD2Q96BF3 282 aa17.33■□□□□ 0.36
TNFRSF18-201ENST00000328596 ESM1Q9NQ30 184 aa17.33■□□□□ 0.36
TNFRSF18-201ENST00000328596 FKBP14Q9NWM8 211 aa17.33■□□□□ 0.36
TNFRSF18-201ENST00000328596 CHCHD3Q9NX63 227 aaKnown RBP17.33■□□□□ 0.36
TNFRSF18-201ENST00000328596 SCN3BQ9NY72 215 aa17.33■□□□□ 0.36
TNFRSF18-201ENST00000328596 RPUSD1Q9UJJ7 312 aaKnown RBP17.33■□□□□ 0.36
TNFRSF18-201ENST00000328596 CAB39Q9Y376 341 aaPredicted RBP17.33■□□□□ 0.36
TNFRSF18-201ENST00000328596 PQLC2LA1A4F0 135 aa17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 ANKRD61A6NGH8 418 aa17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 OR2AT4A6NND4 320 aa17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 H3BSH0 61 aa17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 J3QT63 122 aa17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 SLC1A7O00341 560 aa17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 TOX4O94842 621 aa17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 HTR1AP08908 422 aa17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 UBCP0CG48 685 aaKnown RBP17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 MMP9P14780 707 aa17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 KIR3DL2P43630 455 aa17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 HAAOP46952 286 aa17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 CCR9P51686 369 aa17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 METTL11BQ5VVY1 283 aa17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 TMPRSS11AQ6ZMR5 421 aa17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 AHSA2Q719I0 299 aa17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 STX19Q8N4C7 294 aa17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 ZDHHC22Q8N966 263 aa17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 FAM216AQ8WUB2 273 aa17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 MED30Q96HR3 178 aa17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 WDFY2Q96P53 400 aa17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 GAFA1Q96PS6 74 aa17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 PCGF1Q9BSM1 259 aa17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 ISG20L2Q9H9L3 353 aaKnown RBP17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 RASL12Q9NYN1 266 aa17.32■□□□□ 0.36
TNFRSF18-201ENST00000328596 LOC107986453A0A1B0GWG9 222 aa17.31■□□□□ 0.36
TNFRSF18-201ENST00000328596 SFTPBP07988 381 aa17.31■□□□□ 0.36
TNFRSF18-201ENST00000328596 ACAA1P09110 424 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF18-201ENST00000328596 GBX2P52951 348 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF18-201ENST00000328596 IL13RA1P78552 427 aa17.31■□□□□ 0.36
TNFRSF18-201ENST00000328596 GPR157Q5UAW9 335 aa17.31■□□□□ 0.36
TNFRSF18-201ENST00000328596 POC1AQ8NBT0 407 aa17.31■□□□□ 0.36
TNFRSF18-201ENST00000328596 Q9H521 79 aa17.31■□□□□ 0.36
TNFRSF18-201ENST00000328596 CNTD2Q9H8S5 307 aa17.31■□□□□ 0.36
TNFRSF18-201ENST00000328596 FRRS1LQ9P0K9 344 aa17.31■□□□□ 0.36
TNFRSF18-201ENST00000328596 POLDIP2Q9Y2S7 368 aa17.31■□□□□ 0.36
TNFRSF18-201ENST00000328596 IGKV1D-17A0A075B6S4 117 aa17.3■□□□□ 0.36
TNFRSF18-201ENST00000328596 SIGLEC5O15389 551 aa17.3■□□□□ 0.36
TNFRSF18-201ENST00000328596 TFF1P04155 84 aa17.3■□□□□ 0.36
TNFRSF18-201ENST00000328596 CCDC159P0C7I6 412 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms