RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 PLA2G7Q13093 441 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 ZNF154Q13106 437 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 MAB21L1Q13394 359 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 UNC119Q13432 240 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 SWI5Q1ZZU3 235 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 MUC15Q8N387 334 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 SCCPDHQ8NBX0 429 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 KCNG3Q8TAE7 436 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 AQP3Q92482 292 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 MEGF10Q96KG7 1140 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 CST11Q9H112 138 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 HRNRQ86YZ3 2850 aaPredicted RBP8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 SPTAN1Q13813 2472 aaKnown RBP8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 PKDREJQ9NTG1 2253 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 C17orf100A8MU93 164 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 FAM25AB3EWG3 89 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 FAM25CB3EWG5 89 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 FAM25GB3EWG6 89 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 ZNF780AO75290 641 aaPredicted RBP8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 CYB5AP00167 134 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 CD55P08174 381 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 SRP9P49458 86 aaKnown RBP8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 EFNB2P52799 333 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 GPR176Q14439 515 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 RSU1Q15404 277 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 CNIH2Q6PI25 160 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 MFSD4AQ8N468 514 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 OR51F2Q8NH61 342 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 S100ZQ8WXG8 99 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 RAB40AQ8WXH6 277 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 ELL3Q9HB65 397 aaPredicted RBP8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 DYNLRB1Q9NP97 96 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 RAB22AQ9UL26 194 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 RAI1Q7Z5J4 1906 aaPredicted RBP8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 ICE1Q9Y2F5 2266 aa8.69□□□□□ -1.02
VIPAS39-201ENST00000327028 FAM221AA4D161 298 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 SYNGR1O43759 233 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 CDC14BO60729 498 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 KDM4BO94953 1096 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 GRPP07492 148 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 INHBBP09529 407 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 SNRPD2P62316 118 aaKnown RBP8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 C11orf91Q3C1V1 193 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 SLC22A6Q4U2R8 563 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 PRAMEF6Q5VXH4 476 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 OR10K2Q6IF99 312 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 CDH24Q86UP0 819 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 CMTM4Q8IZR5 234 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 SLAMF9Q96A28 289 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 DIRAS2Q96HU8 199 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 OR2V2Q96R30 315 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 PCDHB16Q9NRJ7 776 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 FAIMQ9NVQ4 179 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 IL19Q9UHD0 177 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 FBXO9Q9UK97 447 aaPredicted RBP8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 POLDIP2Q9Y2S7 368 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 TENM4Q6N022 2769 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 A0A1W2PPR1 153 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 CRTAPO75718 401 aaPredicted RBP8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 SERPINA2P20848 420 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 GATA4P43694 442 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 TNFAIP6P98066 277 aaPredicted RBP8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 FAM209AQ5JX71 171 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 SPANXN2Q5MJ10 180 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 TMEM104Q8NE00 496 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 Q8NFD4 153 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 OR4M1Q8NGD0 313 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 OR10K1Q8NGX5 313 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 FAM46BQ96A09 425 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 TMEM59Q9BXS4 323 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 HMG20AQ9NP66 347 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 EXTL2Q9UBQ6 330 aa8.68□□□□□ -1.02
VIPAS39-201ENST00000327028 A0A1W2PP11 408 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 A1L4Q6 167 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 CLDN25C9JDP6 229 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 TRAPPC2LH3BP13 241 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 MPIG6BO95866 241 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 COX6B1P14854 86 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 MGMTP16455 207 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 TALDO1P37837 337 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 PPOXP50336 477 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 RPS27AP62979 156 aaKnown RBP8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 FAM189A2Q15884 450 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 PCGF3Q3KNV8 242 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 AGAP6Q5VW22 663 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 METAP1DQ6UB28 335 aaPredicted RBP8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 BIVMQ86UB2 503 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 DTX2Q86UW9 622 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 C11orf53Q8IXP5 236 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 ITLN1Q8WWA0 313 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 WDR12Q9GZL7 423 aaKnown RBP8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 MS4A5Q9H3V2 200 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 FN3KRPQ9HA64 309 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 RHOFQ9HBH0 211 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 CBLN4Q9NTU7 201 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 MTCH1Q9NZJ7 389 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 V9GYH0 126 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 HELZ2Q9BYK8 2649 aaKnown RBP8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 ARFGEF3Q5TH69 2177 aa8.67□□□□□ -1.02
VIPAS39-201ENST00000327028 IGHV3-64DA0A0J9YX35 117 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms