RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 DSPP15924 2871 aaKnown RBP13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 NSG1A0A0A6YYJ2 146 aa13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 A0A0G2JMM0 328 aa13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 A0A1W2PPB8 328 aa13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 A0A1W2PRS3 328 aa13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 KIR3DP1A8MWS1 328 aa13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 RAB27BO00194 218 aa13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 KLF7O75840 302 aaPredicted RBP13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 HCKP08631 526 aa13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 PNLIPP16233 465 aa13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 GSK3AP49840 483 aa13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 CLINT1Q14677 625 aa13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 THEM4Q5T1C6 240 aa13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 AKR7LQ8NHP1 331 aa13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 ZNF837Q96EG3 531 aaPredicted RBP13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 EXPH5Q8NEV8 1989 aa13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 ZNF407Q9C0G0 2248 aa13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 A0A1B0GV90 55 aa13.65□□□□□ -0.23
SHROOM1-201ENST00000319854 TNFSF11O14788 317 aa13.65□□□□□ -0.23
SHROOM1-201ENST00000319854 IGFBP3P17936 291 aaPredicted RBP13.65□□□□□ -0.23
SHROOM1-201ENST00000319854 RAB32Q13637 225 aa13.65□□□□□ -0.23
SHROOM1-201ENST00000319854 MARS2Q96GW9 593 aaKnown RBP13.65□□□□□ -0.23
SHROOM1-201ENST00000319854 ELL3Q9HB65 397 aaPredicted RBP13.65□□□□□ -0.23
SHROOM1-201ENST00000319854 TAF9BQ9HBM6 251 aa13.65□□□□□ -0.23
SHROOM1-201ENST00000319854 AMDHD2Q9Y303 409 aa13.65□□□□□ -0.23
SHROOM1-201ENST00000319854 IGHV1-45A0A0A0MS14 117 aa13.64□□□□□ -0.23
SHROOM1-201ENST00000319854 A0A1W2PPE2 198 aa13.64□□□□□ -0.23
SHROOM1-201ENST00000319854 E9PLN8 166 aa13.64□□□□□ -0.23
SHROOM1-201ENST00000319854 M0R036 132 aa13.64□□□□□ -0.23
SHROOM1-201ENST00000319854 TRAPPC6AO75865 159 aa13.64□□□□□ -0.23
SHROOM1-201ENST00000319854 MPIG6BO95866 241 aa13.64□□□□□ -0.23
SHROOM1-201ENST00000319854 GUCA1AP43080 201 aaPredicted RBP13.64□□□□□ -0.23
SHROOM1-201ENST00000319854 DVL1P1P54792 670 aaPredicted RBP13.64□□□□□ -0.23
SHROOM1-201ENST00000319854 PHYHD1Q5SRE7 291 aa13.64□□□□□ -0.23
SHROOM1-201ENST00000319854 FOXRED2Q8IWF2 684 aa13.64□□□□□ -0.23
SHROOM1-201ENST00000319854 OR8B12Q8NGG6 310 aa13.64□□□□□ -0.23
SHROOM1-201ENST00000319854 TMPRSS5Q9H3S3 457 aa13.64□□□□□ -0.23
SHROOM1-201ENST00000319854 OR5H15A6NDH6 313 aa13.64□□□□□ -0.23
SHROOM1-201ENST00000319854 HSPB2A8KAH6 182 aa13.64□□□□□ -0.23
SHROOM1-201ENST00000319854 DBHP09172 617 aa13.64□□□□□ -0.23
SHROOM1-201ENST00000319854 MSX1P28360 303 aa13.64□□□□□ -0.23
SHROOM1-201ENST00000319854 CX3CR1P49238 355 aa13.64□□□□□ -0.23
SHROOM1-201ENST00000319854 MMP16P51512 607 aa13.64□□□□□ -0.23
SHROOM1-201ENST00000319854 HSPB2Q16082 182 aa13.64□□□□□ -0.23
SHROOM1-201ENST00000319854 Q6ZRG5 221 aa13.64□□□□□ -0.23
SHROOM1-201ENST00000319854 RPS19BP1Q86WX3 136 aaKnown RBP13.64□□□□□ -0.23
SHROOM1-201ENST00000319854 TMEM104Q8NE00 496 aa13.64□□□□□ -0.23
SHROOM1-201ENST00000319854 TMEM230Q96A57 120 aa13.64□□□□□ -0.23
SHROOM1-201ENST00000319854 COL5A1P20908 1838 aaPredicted RBP13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 PATE4P0C8F1 98 aa13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 COX6A1P12074 109 aa13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 BTF3P20290 206 aaKnown RBP13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 ZNF93P35789 620 aaPredicted RBP13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 GLP1RP43220 463 aa13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 P2RY4P51582 365 aa13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 UNC119Q13432 240 aa13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 OR2A2Q6IF42 318 aa13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 PRSS54Q6PEW0 395 aa13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 TAAR9Q96RI9 348 aa13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 OR3A4PP47883 348 aa13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 UBALD2Q8IYN6 164 aa13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 OR5D14Q8NGL3 314 aa13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 RP1L1Q8IWN7 2480 aaPredicted RBP13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 ZNF878C9JN71 531 aa13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 NPIPA2E9PIF3 369 aa13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 NPIPA3F8WFD2 350 aa13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 CSTBP04080 98 aaKnown RBP13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 SSR4P51571 173 aa13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 ZNF239Q16600 458 aaKnown RBP13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 ANKRD55Q3KP44 614 aa13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 DBX2Q6ZNG2 339 aa13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 ZNF383Q8NA42 475 aa13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 OXGR1Q96P68 337 aa13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 AQP10Q96PS8 301 aa13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 TOLLIPQ9H0E2 274 aa13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 TREM2Q9NZC2 230 aa13.63□□□□□ -0.23
SHROOM1-201ENST00000319854 SPTBN2O15020 2390 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 TMEM265A0A087WTH1 108 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 IGHV3-9P01782 118 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 VSIG8P0DPA2 414 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 FGF5P12034 268 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 TCN2P20062 427 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 RAB6AP20340 208 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 SULT1A2P50226 295 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 NPY4RP50391 375 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 FAHD2BQ6P2I3 314 aaPredicted RBP13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 CLEC18BQ6UXF7 455 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 FAHD2AQ96GK7 314 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 C5orf66Q9H5L9 145 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 SPACA1Q9HBV2 294 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 GSKIPQ9P0R6 139 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 ZNF107Q9UII5 783 aaPredicted RBP13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 RHBDD3Q9Y3P4 386 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 MEGF11A6BM72 1044 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 METTL21EPA6NDL7 271 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 ST8SIA5O15466 376 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 SLC34A2O95436 690 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 CSNK1A1P48729 337 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 SPEM2Q0P670 501 aa13.62□□□□□ -0.23
SHROOM1-201ENST00000319854 IL11RAQ14626 422 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms