RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 NOX4Q9NPH5 578 aa15.05■□□□□ -0
SSSCA1-201ENST00000309328 SF3B6Q9Y3B4 125 aaKnown RBP15.05■□□□□ -0
SSSCA1-201ENST00000309328 VPS13CQ709C8 3753 aa15.05■□□□□ -0
SSSCA1-201ENST00000309328 TRDV1A0A1B0GX56 115 aa15.04■□□□□ -0
SSSCA1-201ENST00000309328 ISPDA4D126 451 aa15.04■□□□□ -0
SSSCA1-201ENST00000309328 OOEPA6NGQ2 149 aa15.04■□□□□ -0
SSSCA1-201ENST00000309328 RNF223E7ERA6 249 aa15.04■□□□□ -0
SSSCA1-201ENST00000309328 INMTO95050 263 aa15.04■□□□□ -0
SSSCA1-201ENST00000309328 JUNBP17275 347 aaPredicted RBP15.04■□□□□ -0
SSSCA1-201ENST00000309328 BMXP51813 675 aa15.04■□□□□ -0
SSSCA1-201ENST00000309328 SSX1Q16384 188 aa15.04■□□□□ -0
SSSCA1-201ENST00000309328 GCSAMQ8N6F7 178 aa15.04■□□□□ -0
SSSCA1-201ENST00000309328 POC1AQ8NBT0 407 aa15.04■□□□□ -0
SSSCA1-201ENST00000309328 TMEM203Q969S6 136 aa15.04■□□□□ -0
SSSCA1-201ENST00000309328 FOXRED1Q96CU9 486 aaPredicted RBP15.04■□□□□ -0
SSSCA1-201ENST00000309328 COX4I2Q96KJ9 171 aa15.04■□□□□ -0
SSSCA1-201ENST00000309328 GAL3ST1Q99999 423 aa15.04■□□□□ -0
SSSCA1-201ENST00000309328 DNTTIP1Q9H147 329 aa15.04■□□□□ -0
SSSCA1-201ENST00000309328 ITPR3Q14573 2671 aa15.03■□□□□ -0
SSSCA1-201ENST00000309328 PGA5P0DJD9 388 aa15.03■□□□□ -0
SSSCA1-201ENST00000309328 GLRA1P23415 457 aa15.03■□□□□ -0
SSSCA1-201ENST00000309328 ZNF93P35789 620 aaPredicted RBP15.03■□□□□ -0
SSSCA1-201ENST00000309328 PSMD7P51665 324 aa15.03■□□□□ -0
SSSCA1-201ENST00000309328 RPS25P62851 125 aaKnown RBP15.03■□□□□ -0
SSSCA1-201ENST00000309328 PDZK1IP1Q13113 114 aa15.03■□□□□ -0
SSSCA1-201ENST00000309328 ZMYND11Q15326 602 aa15.03■□□□□ -0
SSSCA1-201ENST00000309328 ZNF404Q494X3 552 aa15.03■□□□□ -0
SSSCA1-201ENST00000309328 DDI2Q5TDH0 399 aa15.03■□□□□ -0
SSSCA1-201ENST00000309328 FIP1L1Q6UN15 594 aaKnown RBP15.03■□□□□ -0
SSSCA1-201ENST00000309328 DCDC5Q6ZRR9 648 aa15.03■□□□□ -0
SSSCA1-201ENST00000309328 ZNF826PQ6ZT77 177 aa15.03■□□□□ -0
SSSCA1-201ENST00000309328 NLRC3Q7RTR2 1065 aa15.03■□□□□ -0
SSSCA1-201ENST00000309328 GPER1Q99527 375 aa15.03■□□□□ -0
SSSCA1-201ENST00000309328 NRIP2Q9BQI9 281 aa15.03■□□□□ -0
SSSCA1-201ENST00000309328 UQCC2Q9BRT2 126 aa15.03■□□□□ -0
SSSCA1-201ENST00000309328 MRPS26Q9BYN8 205 aaKnown RBP15.03■□□□□ -0
SSSCA1-201ENST00000309328 PCDHB16Q9NRJ7 776 aa15.03■□□□□ -0
SSSCA1-201ENST00000309328 SNTG1Q9NSN8 517 aa15.03■□□□□ -0
SSSCA1-201ENST00000309328 DNAJB11Q9UBS4 358 aa15.03■□□□□ -0
SSSCA1-201ENST00000309328 MIOXQ9UGB7 285 aa15.03■□□□□ -0
SSSCA1-201ENST00000309328 PCDHB10Q9UN67 800 aa15.03■□□□□ -0
SSSCA1-201ENST00000309328 IGKV1-27A0A075B6S5 117 aa15.02■□□□□ -0
SSSCA1-201ENST00000309328 A0A096LNT2 108 aa15.02■□□□□ -0
SSSCA1-201ENST00000309328 IGHV4-61A0A0C4DH41 118 aa15.02■□□□□ -0
SSSCA1-201ENST00000309328 TRAPPC2LH3BP13 241 aa15.02■□□□□ -0
SSSCA1-201ENST00000309328 H7C1Q1 480 aa15.02■□□□□ -0
SSSCA1-201ENST00000309328 GABRPO00591 440 aa15.02■□□□□ -0
SSSCA1-201ENST00000309328 SRMP19623 302 aa15.02■□□□□ -0
SSSCA1-201ENST00000309328 FGF9P31371 208 aaPredicted RBP15.02■□□□□ -0
SSSCA1-201ENST00000309328 AVPI1Q5T686 147 aa15.02■□□□□ -0
SSSCA1-201ENST00000309328 ASPHD2Q6ICH7 369 aa15.02■□□□□ -0
SSSCA1-201ENST00000309328 GDPGP1Q6ZNW5 385 aa15.02■□□□□ -0
SSSCA1-201ENST00000309328 SLC25A26Q70HW3 274 aa15.02■□□□□ -0
SSSCA1-201ENST00000309328 CALHM1Q8IU99 346 aa15.02■□□□□ -0
SSSCA1-201ENST00000309328 PXT1Q8NFP0 134 aa15.02■□□□□ -0
SSSCA1-201ENST00000309328 TMIGD2Q96BF3 282 aa15.02■□□□□ -0
SSSCA1-201ENST00000309328 C18orf12Q96KH6 178 aa15.02■□□□□ -0
SSSCA1-201ENST00000309328 CEP19Q96LK0 163 aa15.02■□□□□ -0
SSSCA1-201ENST00000309328 TMUB1Q9BVT8 246 aa15.02■□□□□ -0
SSSCA1-201ENST00000309328 METTL17Q9H7H0 456 aaPredicted RBP15.02■□□□□ -0
SSSCA1-201ENST00000309328 TMEM165Q9HC07 324 aa15.02■□□□□ -0
SSSCA1-201ENST00000309328 STUB1Q9UNE7 303 aa15.02■□□□□ -0
SSSCA1-201ENST00000309328 GSTK1Q9Y2Q3 226 aa15.02■□□□□ -0
SSSCA1-201ENST00000309328 PIN1P1O15428 100 aa15.01□□□□□ -0.01
SSSCA1-201ENST00000309328 ZNF780AO75290 641 aaPredicted RBP15.01□□□□□ -0.01
SSSCA1-201ENST00000309328 NXPH2O95156 264 aa15.01□□□□□ -0.01
SSSCA1-201ENST00000309328 CD99P14209 185 aa15.01□□□□□ -0.01
SSSCA1-201ENST00000309328 POU3F4P49335 361 aa15.01□□□□□ -0.01
SSSCA1-201ENST00000309328 GZMKP49863 264 aa15.01□□□□□ -0.01
SSSCA1-201ENST00000309328 FABP5Q01469 135 aa15.01□□□□□ -0.01
SSSCA1-201ENST00000309328 C11orf91Q3C1V1 193 aa15.01□□□□□ -0.01
SSSCA1-201ENST00000309328 DMRTC1Q5HYR2 192 aa15.01□□□□□ -0.01
SSSCA1-201ENST00000309328 GLT8D1Q68CQ7 371 aa15.01□□□□□ -0.01
SSSCA1-201ENST00000309328 TMEM91Q6ZNR0 172 aa15.01□□□□□ -0.01
SSSCA1-201ENST00000309328 ANGPTL5Q86XS5 388 aa15.01□□□□□ -0.01
SSSCA1-201ENST00000309328 OR52N4Q8NGI2 321 aa15.01□□□□□ -0.01
SSSCA1-201ENST00000309328 OR51A2Q8NGJ7 313 aa15.01□□□□□ -0.01
SSSCA1-201ENST00000309328 OR51F2Q8NH61 342 aa15.01□□□□□ -0.01
SSSCA1-201ENST00000309328 S100A13Q99584 98 aa15.01□□□□□ -0.01
SSSCA1-201ENST00000309328 DCAF16Q9NXF7 216 aa15.01□□□□□ -0.01
SSSCA1-201ENST00000309328 SSR3Q9UNL2 185 aa15.01□□□□□ -0.01
SSSCA1-201ENST00000309328 TANC2Q9HCD6 1990 aa15.01□□□□□ -0.01
SSSCA1-201ENST00000309328 TRAV8-7A0A075B6U6 113 aa15□□□□□ -0.01
SSSCA1-201ENST00000309328 TRAV1-2A0A0B4J238 106 aa15□□□□□ -0.01
SSSCA1-201ENST00000309328 AKR7A2O43488 359 aa15□□□□□ -0.01
SSSCA1-201ENST00000309328 RHBDL1O75783 438 aa15□□□□□ -0.01
SSSCA1-201ENST00000309328 MYL9P24844 172 aa15□□□□□ -0.01
SSSCA1-201ENST00000309328 NPY4RP50391 375 aa15□□□□□ -0.01
SSSCA1-201ENST00000309328 GP2P55259 537 aaKnown RBP15□□□□□ -0.01
SSSCA1-201ENST00000309328 ZP1P60852 638 aa15□□□□□ -0.01
SSSCA1-201ENST00000309328 ERVK11-1P61568 191 aa15□□□□□ -0.01
SSSCA1-201ENST00000309328 GPR176Q14439 515 aa15□□□□□ -0.01
SSSCA1-201ENST00000309328 SLC36A1Q7Z2H8 476 aa15□□□□□ -0.01
SSSCA1-201ENST00000309328 SATL1Q86VE3 508 aa15□□□□□ -0.01
SSSCA1-201ENST00000309328 BOLLQ8N9W6 283 aaKnown RBP15□□□□□ -0.01
SSSCA1-201ENST00000309328 CLDND2Q8NHS1 167 aa15□□□□□ -0.01
SSSCA1-201ENST00000309328 TMEM246Q9BRR3 403 aa15□□□□□ -0.01
SSSCA1-201ENST00000309328 ZNF665Q9H7R5 613 aa15□□□□□ -0.01
SSSCA1-201ENST00000309328 SEBOXQ9HB31 216 aaPredicted RBP15□□□□□ -0.01
SSSCA1-201ENST00000309328 PATZ1Q9HBE1 687 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms