RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 GALMQ96C23 342 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 VN1R1Q9GZP7 353 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 STRCQ7RTU9 1775 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 A0A096LPE4 126 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 A0A1W2PPZ6 126 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 MBPP02686 304 aaPredicted RBP11.45□□□□□ -0.58
COL3A1-201ENST00000304636 ARG1P05089 322 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 HOXB3P14651 431 aaPredicted RBP11.45□□□□□ -0.58
COL3A1-201ENST00000304636 CXCL2P19875 107 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 RTL8BQ17RB0 113 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 TMEM183BQ1AE95 376 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 FGF14Q92915 247 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 TAAR9Q96RI9 348 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 GPA33Q99795 319 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 PARP11Q9NR21 331 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 MIOXQ9UGB7 285 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 NHSL1Q5SYE7 1610 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 OR4C45A6NMZ5 311 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 B4DEV8 164 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 RER1O15258 196 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 CBR3O75828 277 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 TOX4O94842 621 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 CT45A10P0DMU9 189 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 TMEM215Q68D42 235 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 NUBPLQ8TB37 319 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 ISOC2Q96AB3 205 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 MS4A10Q96PG2 267 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 NGBQ9NPG2 151 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 ST6GALNAC2Q9UJ37 374 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 TTC3P53804 2025 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 AQP7P3A6NL99 342 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 ZNF737O75373 536 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 CISD3P0C7P0 127 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 SPACA9Q96E40 222 aaPredicted RBP11.45□□□□□ -0.58
COL3A1-201ENST00000304636 S1PR3Q99500 378 aa11.45□□□□□ -0.58
COL3A1-201ENST00000304636 SPTY2D1-AS1A0A0U1RR47 76 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 A0A1W2PPE2 198 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 J3QR89 54 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 NTN1O95631 604 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 CT62P0C5K7 136 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 PMS2P11Q13670 270 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 ZNF273Q14593 569 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 PRSS41Q7RTY9 318 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 TMEM104Q8NE00 496 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.44□□□□□ -0.58
COL3A1-201ENST00000304636 ROBO4Q8WZ75 1007 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 THOC3Q96J01 351 aaKnown RBP11.44□□□□□ -0.58
COL3A1-201ENST00000304636 FAM166BA8MTA8 275 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 HSBP1O75506 76 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 LY86O95711 162 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 NMBP08949 121 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 CST2P09228 141 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 SULT1A1P50225 295 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 DSCR4P56555 118 aaPredicted RBP11.44□□□□□ -0.58
COL3A1-201ENST00000304636 SLC38A11Q08AI6 406 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 IL24Q13007 206 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 MESTQ5EB52 335 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 H1FXQ92522 213 aaKnown RBP11.44□□□□□ -0.58
COL3A1-201ENST00000304636 MARVELD3Q96A59 401 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 APOBEC3DQ96AK3 386 aaPredicted RBP11.44□□□□□ -0.58
COL3A1-201ENST00000304636 PECRQ9BY49 303 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 DEFA4P12838 97 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 INSM1Q01101 510 aaPredicted RBP11.44□□□□□ -0.58
COL3A1-201ENST00000304636 ZNF816Q0VGE8 651 aaPredicted RBP11.44□□□□□ -0.58
COL3A1-201ENST00000304636 FFAR4Q5NUL3 377 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 MOB1BQ7L9L4 216 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 FOXB1Q99853 325 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 DOCK1Q14185 1865 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 A0A087X0M5 115 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 A0A1B0GX30 115 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 GALR2O43603 387 aaPredicted RBP11.44□□□□□ -0.58
COL3A1-201ENST00000304636 ADH4P08319 380 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 MYOGP15173 224 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 GPM6AP51674 278 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 ICAM5Q9UMF0 924 aa11.44□□□□□ -0.58
COL3A1-201ENST00000304636 MRPS2Q9Y399 296 aaKnown RBP11.44□□□□□ -0.58
COL3A1-201ENST00000304636 GLB1P16278 677 aa11.43□□□□□ -0.58
COL3A1-201ENST00000304636 ZBTB25P24278 435 aa11.43□□□□□ -0.58
COL3A1-201ENST00000304636 CD81P60033 236 aa11.43□□□□□ -0.58
COL3A1-201ENST00000304636 ERHP84090 104 aaKnown RBP11.43□□□□□ -0.58
COL3A1-201ENST00000304636 ZNF707Q96C28 371 aaPredicted RBP11.43□□□□□ -0.58
COL3A1-201ENST00000304636 SIRT7Q9NRC8 400 aa11.43□□□□□ -0.58
COL3A1-201ENST00000304636 DECR2Q9NUI1 292 aa11.43□□□□□ -0.58
COL3A1-201ENST00000304636 CBY3A6NI87 242 aa11.43□□□□□ -0.58
COL3A1-201ENST00000304636 GPR37O15354 613 aa11.43□□□□□ -0.58
COL3A1-201ENST00000304636 PDCD6O75340 191 aa11.43□□□□□ -0.58
COL3A1-201ENST00000304636 CYC1P08574 325 aa11.43□□□□□ -0.58
COL3A1-201ENST00000304636 CCKARP32238 428 aa11.43□□□□□ -0.58
COL3A1-201ENST00000304636 CNN1P51911 297 aaKnown RBP11.43□□□□□ -0.58
COL3A1-201ENST00000304636 CEACAM16Q2WEN9 425 aa11.43□□□□□ -0.58
COL3A1-201ENST00000304636 DGAT2L6Q6ZPD8 337 aa11.43□□□□□ -0.58
COL3A1-201ENST00000304636 OR4C5Q8NGB2 326 aa11.43□□□□□ -0.58
COL3A1-201ENST00000304636 MCHR2Q969V1 340 aa11.43□□□□□ -0.58
COL3A1-201ENST00000304636 GPR87Q9BY21 358 aa11.43□□□□□ -0.58
COL3A1-201ENST00000304636 Q9N2K0 584 aa11.43□□□□□ -0.58
COL3A1-201ENST00000304636 SMCHD1A6NHR9 2005 aa11.43□□□□□ -0.58
COL3A1-201ENST00000304636 MED19A0JLT2 244 aaPredicted RBP11.43□□□□□ -0.58
COL3A1-201ENST00000304636 OR5G3P0C626 314 aa11.43□□□□□ -0.58
COL3A1-201ENST00000304636 CSN1S1P47710 185 aa11.43□□□□□ -0.58
COL3A1-201ENST00000304636 LSM11P83369 360 aaKnown RBP eCLIP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms