RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 TMIGD2Q96BF3 282 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 DERL3Q96Q80 235 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 SPACA5Q96QH8 159 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 GFI1Q99684 422 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 FOXC2Q99958 501 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 TMED9Q9BVK6 235 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 RAB1BQ9H0U4 201 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 OR51I2Q9H344 312 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 MS4A5Q9H3V2 200 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 SAP30LQ9HAJ7 183 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 NDUFB11Q9NX14 153 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 TAS2R4Q9NYW5 299 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 IL19Q9UHD0 177 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 ENPP5Q9UJA9 477 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 ZDHHC8Q9ULC8 765 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 PMF1-BGLAPU3KQ54 211 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 A0A087WXM4 84 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 IGHV1-69-2A0A0G2JMI3 117 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 A0A1W2PPK0 400 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 ANKRD30BLA7E2S9 258 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 ZNF879B4DU55 563 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 ZNF732B4DXR9 585 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 F8VVB4 439 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 F8VWA3 439 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.95□□□□□ -1.62
SSX3-201ENST00000298396 ZNF561-AS1K7EIQ3 104 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 SYNGR1O43759 233 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 CDC14BO60729 498 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 MTRF1O75570 445 aaKnown RBP4.95□□□□□ -1.62
SSX3-201ENST00000298396 FCN3O75636 299 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 GPX5O75715 221 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 RHBDL1O75783 438 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 CYB5R3P00387 301 aaPredicted RBP4.95□□□□□ -1.62
SSX3-201ENST00000298396 TFAP2AP05549 437 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 UCHL1P09936 223 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 ADRA2CP18825 462 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 ATF1P18846 271 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 GIFP27352 417 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 PSMB9P28065 219 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 TGFBR1P36897 503 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 MECP2P51608 486 aaKnown RBP4.95□□□□□ -1.62
SSX3-201ENST00000298396 ART1P52961 327 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 ZP1P60852 638 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 MOGQ16653 247 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 CEACAM21Q3KPI0 293 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 Q499Y3 187 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 YIF1BQ5BJH7 314 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 PLCXD3Q63HM9 321 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 CD200R1LQ6Q8B3 271 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 WDR82Q6UXN9 313 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 CALHM1Q8IU99 346 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 ZDHHC23Q8IYP9 409 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 CIARTQ8N365 385 aaPredicted RBP4.95□□□□□ -1.62
SSX3-201ENST00000298396 SCCPDHQ8NBX0 429 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 C19orf18Q8NEA5 215 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 CCDC54Q8NEL0 328 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 OR13C9Q8NGT0 318 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 TRMT10AQ8TBZ6 339 aaKnown RBP4.95□□□□□ -1.62
SSX3-201ENST00000298396 GPR148Q8TDV2 347 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 C10orf105Q8TEF2 133 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 TSEN15Q8WW01 171 aaKnown RBP4.95□□□□□ -1.62
SSX3-201ENST00000298396 NEU4Q8WWR8 484 aaPredicted RBP4.95□□□□□ -1.62
SSX3-201ENST00000298396 UFD1Q92890 307 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 RPL3LQ92901 407 aaKnown RBP4.95□□□□□ -1.62
SSX3-201ENST00000298396 ITFG2Q969R8 447 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 TMEM203Q969S6 136 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 TMEM106AQ96A25 262 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 C10orf35Q96D05 121 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 YIPF6Q96EC8 236 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 SEH1LQ96EE3 360 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 DIRC2Q96SL1 478 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 MYCBPQ99417 103 aaPredicted RBP4.95□□□□□ -1.62
SSX3-201ENST00000298396 SLC22A4Q9H015 551 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 COMMD4Q9H0A8 199 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 ZCCHC4Q9H5U6 513 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 RNF167Q9H6Y7 350 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 METTL17Q9H7H0 456 aaPredicted RBP4.95□□□□□ -1.62
SSX3-201ENST00000298396 NOX4Q9NPH5 578 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 UFSP2Q9NUQ7 469 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 DHDHQ9UQ10 334 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 MPC1Q9Y5U8 109 aa4.95□□□□□ -1.62
SSX3-201ENST00000298396 FN1P02751 2386 aaKnown RBP4.94□□□□□ -1.62
SSX3-201ENST00000298396 IGKV1-12A0A0C4DH73 117 aa4.94□□□□□ -1.62
SSX3-201ENST00000298396 LRP5LA4QPB2 252 aa4.94□□□□□ -1.62
SSX3-201ENST00000298396 TRIM64BA6NI03 449 aa4.94□□□□□ -1.62
SSX3-201ENST00000298396 NUDT19A8MXV4 375 aa4.94□□□□□ -1.62
SSX3-201ENST00000298396 TMEM178BH3BS89 294 aa4.94□□□□□ -1.62
SSX3-201ENST00000298396 GABRPO00591 440 aa4.94□□□□□ -1.62
SSX3-201ENST00000298396 TNFRSF13BO14836 293 aaPredicted RBP4.94□□□□□ -1.62
SSX3-201ENST00000298396 SULT1B1O43704 296 aa4.94□□□□□ -1.62
SSX3-201ENST00000298396 LHBP01229 141 aa4.94□□□□□ -1.62
SSX3-201ENST00000298396 IGKV1D-12P01611 117 aa4.94□□□□□ -1.62
SSX3-201ENST00000298396 IGHV2-70P01814 119 aa4.94□□□□□ -1.62
SSX3-201ENST00000298396 TFF1P04155 84 aa4.94□□□□□ -1.62
SSX3-201ENST00000298396 AMY2AP04746 511 aa4.94□□□□□ -1.62
SSX3-201ENST00000298396 GRPP07492 148 aa4.94□□□□□ -1.62
SSX3-201ENST00000298396 RPSAP08865 295 aaKnown RBP4.94□□□□□ -1.62
SSX3-201ENST00000298396 OCM2P0CE71 109 aa4.94□□□□□ -1.62
SSX3-201ENST00000298396 CD37P11049 281 aa4.94□□□□□ -1.62
SSX3-201ENST00000298396 ZNF12P17014 697 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms