RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 AKAIN1P0CW23 69 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 PSMB1P20618 241 aaKnown RBP12.31□□□□□ -0.44
C9orf3-202ENST00000297979 GNG10P50151 68 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 AP2S1P53680 142 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-202ENST00000297979 RAG2P55895 527 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 RPS27AP62979 156 aaKnown RBP12.31□□□□□ -0.44
C9orf3-202ENST00000297979 PLCXD3Q63HM9 321 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 SEM1Q6ZVN7 128 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 MOB3CQ70IA8 216 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 OR56B1Q8NGI3 324 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 OR4C16Q8NGL9 310 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 OR56B4Q8NH76 319 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 SELENOIQ9C0D9 397 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 ACTR6Q9GZN1 396 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 C20orf85Q9H1P6 137 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 ELL3Q9HB65 397 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-202ENST00000297979 PTTG3PQ9NZH4 202 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 SLC7A11Q9UPY5 501 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 CACNA1GO43497 2377 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 SPTBN2O15020 2390 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 F8W036 122 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 TNFSF13O75888 250 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 H2AFB2P0C5Z0 115 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 TMEM225BP0DP42 221 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 MGMTP16455 207 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 GNB3P16520 340 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 SERPINA2P20848 420 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 PTGER4P35408 488 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 WNT5AP41221 380 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 FUT6P51993 359 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 TAS2R19P59542 299 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 TBC1D28Q2M2D7 210 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 MYO7BQ6PIF6 2116 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 C1orf162Q8NEQ5 155 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-202ENST00000297979 OR6F1Q8NGZ6 308 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 EXTL1Q92935 676 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 ZNF486Q96H40 463 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-202ENST00000297979 APC2O95996 2303 aa12.31□□□□□ -0.44
C9orf3-202ENST00000297979 IGKV1-27A0A075B6S5 117 aa12.3□□□□□ -0.44
C9orf3-202ENST00000297979 A0A0A6YYJ9 748 aa12.3□□□□□ -0.44
C9orf3-202ENST00000297979 FIGNL2A6NMB9 653 aa12.3□□□□□ -0.44
C9orf3-202ENST00000297979 ZNF14P17017 642 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-202ENST00000297979 HLXQ14774 488 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-202ENST00000297979 FJX1Q86VR8 437 aa12.3□□□□□ -0.44
C9orf3-202ENST00000297979 GABRG1Q8N1C3 465 aa12.3□□□□□ -0.44
C9orf3-202ENST00000297979 TMEM229BQ8NBD8 167 aa12.3□□□□□ -0.44
C9orf3-202ENST00000297979 STEAP2Q8NFT2 490 aa12.3□□□□□ -0.44
C9orf3-202ENST00000297979 OR10K1Q8NGX5 313 aa12.3□□□□□ -0.44
C9orf3-202ENST00000297979 RAB3CQ96E17 227 aa12.3□□□□□ -0.44
C9orf3-202ENST00000297979 MOV10Q9HCE1 1003 aaKnown RBP12.3□□□□□ -0.44
C9orf3-202ENST00000297979 ZNF107Q9UII5 783 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-202ENST00000297979 PROCRQ9UNN8 238 aa12.3□□□□□ -0.44
C9orf3-202ENST00000297979 NUDT19A8MXV4 375 aa12.3□□□□□ -0.44
C9orf3-202ENST00000297979 SOCS1O15524 211 aa12.3□□□□□ -0.44
C9orf3-202ENST00000297979 FCER2P06734 321 aa12.3□□□□□ -0.44
C9orf3-202ENST00000297979 ATP1B3P54709 279 aa12.3□□□□□ -0.44
C9orf3-202ENST00000297979 RTL6Q6ICC9 239 aa12.3□□□□□ -0.44
C9orf3-202ENST00000297979 TRAPPC6BQ86SZ2 158 aa12.3□□□□□ -0.44
C9orf3-202ENST00000297979 CD163Q86VB7 1156 aa12.3□□□□□ -0.44
C9orf3-202ENST00000297979 PRR18Q8N4B5 295 aa12.3□□□□□ -0.44
C9orf3-202ENST00000297979 OR51T1Q8NGJ9 327 aa12.3□□□□□ -0.44
C9orf3-202ENST00000297979 BOD1Q96IK1 185 aa12.3□□□□□ -0.44
C9orf3-202ENST00000297979 PAPOLGQ9BWT3 736 aaKnown RBP12.3□□□□□ -0.44
C9orf3-202ENST00000297979 COQ3Q9NZJ6 369 aa12.3□□□□□ -0.44
C9orf3-202ENST00000297979 A0A1W2PR80 420 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 ZNF850A8MQ14 1090 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 CYB5AP00167 134 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 CD3DP04234 171 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 GSTP1P09211 210 aaKnown RBP12.29□□□□□ -0.44
C9orf3-202ENST00000297979 HIST1H1DP16402 221 aaKnown RBP12.29□□□□□ -0.44
C9orf3-202ENST00000297979 LINC00303Q3SY05 128 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 STEAP1BQ6NZ63 245 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 FAM89BQ8N5H3 189 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 CSNK2A3Q8NEV1 391 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 OR5L1Q8NGL2 311 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 OR8S1Q8NH09 359 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 STARD4Q96DR4 205 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 METTL9Q9H1A3 318 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 POFUT1Q9H488 388 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 NKIRAS2Q9NYR9 191 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 ZNF221Q9UK13 617 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 FAM215AQ9Y5M1 114 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 KLF2Q9Y5W3 355 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-202ENST00000297979 C7orf66A4D0T2 115 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 L7N2F9 121 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 CGAP01215 116 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 CRHP06850 196 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 TSPAN5P62079 268 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 TSC22D1Q15714 1073 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 EIF2S3LQ2VIR3 472 aaKnown RBP12.29□□□□□ -0.44
C9orf3-202ENST00000297979 PLAC9Q5JTB6 97 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 ZNF324BQ6AW86 544 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-202ENST00000297979 ZNF782Q6ZMW2 699 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-202ENST00000297979 OR4D10Q8NGI6 311 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 NUDCD2Q8WVJ2 157 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 CCDC120Q96HB5 630 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 TM2D1Q9BX74 207 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 GPR160Q9UJ42 338 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 GTF3C1Q12789 2109 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 SPRY1O43609 319 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms