RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 WBP1Q96G27 269 aa17.36■□□□□ 0.37
CXCL16-201ENST00000293778 SLC6A15Q9H2J7 730 aa17.36■□□□□ 0.37
CXCL16-201ENST00000293778 SLC7A10Q9NS82 523 aa17.36■□□□□ 0.37
CXCL16-201ENST00000293778 MED9Q9NWA0 146 aa17.36■□□□□ 0.37
CXCL16-201ENST00000293778 CRYZL1O95825 349 aa17.36■□□□□ 0.37
CXCL16-201ENST00000293778 RLN2P04090 185 aa17.36■□□□□ 0.37
CXCL16-201ENST00000293778 DHRS13Q6UX07 377 aa17.36■□□□□ 0.37
CXCL16-201ENST00000293778 ACOT7LQ6ZUV0 252 aa17.36■□□□□ 0.37
CXCL16-201ENST00000293778 LRRC20Q8TCA0 184 aa17.36■□□□□ 0.37
CXCL16-201ENST00000293778 LINC00470Q9BZP3 86 aa17.36■□□□□ 0.37
CXCL16-201ENST00000293778 GPR179Q6PRD1 2367 aa17.36■□□□□ 0.37
CXCL16-201ENST00000293778 RNF222A6NCQ9 220 aa17.35■□□□□ 0.37
CXCL16-201ENST00000293778 SYNGR4O95473 234 aa17.35■□□□□ 0.37
CXCL16-201ENST00000293778 ZNF708P17019 499 aa17.35■□□□□ 0.37
CXCL16-201ENST00000293778 ARF1P84077 181 aaKnown RBP17.35■□□□□ 0.37
CXCL16-201ENST00000293778 ST8SIA2Q92186 375 aa17.35■□□□□ 0.37
CXCL16-201ENST00000293778 PARPBPQ9NWS1 579 aa17.35■□□□□ 0.37
CXCL16-201ENST00000293778 SDHAF2Q9NX18 166 aa17.35■□□□□ 0.37
CXCL16-201ENST00000293778 IL17BQ9UHF5 180 aa17.35■□□□□ 0.37
CXCL16-201ENST00000293778 R4GN57 208 aa17.35■□□□□ 0.37
CXCL16-201ENST00000293778 IGKV1D-8A0A087WSZ0 117 aa17.35■□□□□ 0.37
CXCL16-201ENST00000293778 BCL2L11O43521 198 aa17.35■□□□□ 0.37
CXCL16-201ENST00000293778 XRCC2O43543 280 aa17.35■□□□□ 0.37
CXCL16-201ENST00000293778 CRHP06850 196 aa17.35■□□□□ 0.37
CXCL16-201ENST00000293778 SUPT4H1P63272 117 aaKnown RBP17.35■□□□□ 0.37
CXCL16-201ENST00000293778 AIMP2Q13155 320 aaKnown RBP17.35■□□□□ 0.37
CXCL16-201ENST00000293778 TAF9Q16594 264 aa17.35■□□□□ 0.37
CXCL16-201ENST00000293778 SIGIRRQ6IA17 410 aa17.35■□□□□ 0.37
CXCL16-201ENST00000293778 RPUSD3Q6P087 351 aaKnown RBP17.35■□□□□ 0.37
CXCL16-201ENST00000293778 ASCL4Q6XD76 172 aa17.35■□□□□ 0.37
CXCL16-201ENST00000293778 CPEB3Q8NE35 698 aaKnown RBP17.35■□□□□ 0.37
CXCL16-201ENST00000293778 HDHD3Q9BSH5 251 aaPredicted RBP17.35■□□□□ 0.37
CXCL16-201ENST00000293778 REG4Q9BYZ8 158 aa17.35■□□□□ 0.37
CXCL16-201ENST00000293778 CHMP1AQ9HD42 196 aaPredicted RBP17.35■□□□□ 0.37
CXCL16-201ENST00000293778 MBD2Q9UBB5 411 aa17.35■□□□□ 0.37
CXCL16-201ENST00000293778 A0A0B4J2A0 478 aa17.34■□□□□ 0.37
CXCL16-201ENST00000293778 EDN3P14138 238 aa17.34■□□□□ 0.37
CXCL16-201ENST00000293778 GLRA1P23415 457 aa17.34■□□□□ 0.37
CXCL16-201ENST00000293778 PSMB6P28072 239 aa17.34■□□□□ 0.37
CXCL16-201ENST00000293778 PLGLB1Q02325 96 aa17.34■□□□□ 0.37
CXCL16-201ENST00000293778 OR8B8Q15620 311 aa17.34■□□□□ 0.37
CXCL16-201ENST00000293778 TUSC5Q8IXB3 177 aa17.34■□□□□ 0.37
CXCL16-201ENST00000293778 TMEM251Q8N6I4 163 aa17.34■□□□□ 0.37
CXCL16-201ENST00000293778 ZSCAN4Q8NAM6 433 aaPredicted RBP17.34■□□□□ 0.37
CXCL16-201ENST00000293778 FAAP24Q9BTP7 215 aa17.34■□□□□ 0.37
CXCL16-201ENST00000293778 NMES1Q9C002 83 aa17.34■□□□□ 0.37
CXCL16-201ENST00000293778 WDR13Q9H1Z4 485 aa17.34■□□□□ 0.37
CXCL16-201ENST00000293778 SHPKQ9UHJ6 478 aa17.34■□□□□ 0.37
CXCL16-201ENST00000293778 HSF4Q9ULV5 492 aa17.34■□□□□ 0.37
CXCL16-201ENST00000293778 SLC7A11Q9UPY5 501 aa17.34■□□□□ 0.37
CXCL16-201ENST00000293778 MFSD2BA6NFX1 497 aa17.33■□□□□ 0.37
CXCL16-201ENST00000293778 TNFSF15O95150 251 aa17.33■□□□□ 0.37
CXCL16-201ENST00000293778 FUT6P51993 359 aa17.33■□□□□ 0.37
CXCL16-201ENST00000293778 CYCSP99999 105 aaKnown RBP17.33■□□□□ 0.37
CXCL16-201ENST00000293778 SURF2Q15527 256 aaPredicted RBP17.33■□□□□ 0.37
CXCL16-201ENST00000293778 BEX5Q5H9J7 111 aa17.33■□□□□ 0.37
CXCL16-201ENST00000293778 MOB3CQ70IA8 216 aa17.33■□□□□ 0.37
CXCL16-201ENST00000293778 PDZD9Q8IXQ8 264 aa17.33■□□□□ 0.37
CXCL16-201ENST00000293778 C1QTNF5Q9BXJ0 243 aa17.33■□□□□ 0.37
CXCL16-201ENST00000293778 CALHM2Q9HA72 323 aa17.33■□□□□ 0.37
CXCL16-201ENST00000293778 RAB18Q9NP72 206 aa17.33■□□□□ 0.37
CXCL16-201ENST00000293778 PFDN2Q9UHV9 154 aa17.33■□□□□ 0.37
CXCL16-201ENST00000293778 ZNF816-ZNF321PA0A0X1KG74 233 aa17.33■□□□□ 0.36
CXCL16-201ENST00000293778 HES3Q5TGS1 186 aa17.33■□□□□ 0.36
CXCL16-201ENST00000293778 C9orf135Q5VTT2 229 aa17.33■□□□□ 0.36
CXCL16-201ENST00000293778 PLCXD3Q63HM9 321 aa17.33■□□□□ 0.36
CXCL16-201ENST00000293778 NSUN5P2Q63ZY6 315 aa17.33■□□□□ 0.36
CXCL16-201ENST00000293778 INO80EQ8NBZ0 244 aaPredicted RBP17.33■□□□□ 0.36
CXCL16-201ENST00000293778 NAXEQ8NCW5 288 aa17.33■□□□□ 0.36
CXCL16-201ENST00000293778 PIGCQ92535 297 aa17.33■□□□□ 0.36
CXCL16-201ENST00000293778 PRDM14Q9GZV8 571 aa17.33■□□□□ 0.36
CXCL16-201ENST00000293778 PRR13Q9NZ81 148 aa17.33■□□□□ 0.36
CXCL16-201ENST00000293778 AHCTF1Q8WYP5 2266 aa17.32■□□□□ 0.36
CXCL16-201ENST00000293778 RRP8O43159 456 aaKnown RBP17.32■□□□□ 0.36
CXCL16-201ENST00000293778 ANKRD55Q3KP44 614 aa17.32■□□□□ 0.36
CXCL16-201ENST00000293778 FNDC9Q8TBE3 224 aa17.32■□□□□ 0.36
CXCL16-201ENST00000293778 SPSB4Q96A44 273 aa17.32■□□□□ 0.36
CXCL16-201ENST00000293778 DMRTA2Q96SC8 542 aa17.32■□□□□ 0.36
CXCL16-201ENST00000293778 PRRG4Q9BZD6 226 aa17.32■□□□□ 0.36
CXCL16-201ENST00000293778 ZNF581Q9P0T4 197 aa17.32■□□□□ 0.36
CXCL16-201ENST00000293778 ATPIF1Q9UII2 106 aa17.32■□□□□ 0.36
CXCL16-201ENST00000293778 AK3Q9UIJ7 227 aa17.32■□□□□ 0.36
CXCL16-201ENST00000293778 EDARQ9UNE0 448 aa17.32■□□□□ 0.36
CXCL16-201ENST00000293778 TMA7Q9Y2S6 64 aaKnown RBP17.32■□□□□ 0.36
CXCL16-201ENST00000293778 IGKV1-12A0A0C4DH73 117 aa17.32■□□□□ 0.36
CXCL16-201ENST00000293778 ZNF587BE7ETH6 402 aa17.32■□□□□ 0.36
CXCL16-201ENST00000293778 ADAP1O75689 374 aa17.32■□□□□ 0.36
CXCL16-201ENST00000293778 IGKV1D-12P01611 117 aa17.32■□□□□ 0.36
CXCL16-201ENST00000293778 PGAM2P15259 253 aa17.32■□□□□ 0.36
CXCL16-201ENST00000293778 LUMP51884 338 aaPredicted RBP17.32■□□□□ 0.36
CXCL16-201ENST00000293778 IP6K3Q96PC2 410 aa17.32■□□□□ 0.36
CXCL16-201ENST00000293778 ZNF471Q9BX82 626 aaPredicted RBP17.32■□□□□ 0.36
CXCL16-201ENST00000293778 C1QTNF6Q9BXI9 259 aa17.32■□□□□ 0.36
CXCL16-201ENST00000293778 FAM117AQ9C073 453 aa17.32■□□□□ 0.36
CXCL16-201ENST00000293778 C14orf166Q9Y224 244 aaKnown RBP17.32■□□□□ 0.36
CXCL16-201ENST00000293778 A0A096LPE4 126 aa17.31■□□□□ 0.36
CXCL16-201ENST00000293778 A0A1W2PPZ6 126 aa17.31■□□□□ 0.36
CXCL16-201ENST00000293778 RPL36A-HNRNPH2H7BZ11 118 aa17.31■□□□□ 0.36
CXCL16-201ENST00000293778 MSTNO14793 375 aa17.31■□□□□ 0.36
CXCL16-201ENST00000293778 CHATP28329 748 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms