RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 KRT84Q9NSB2 600 aa20.6■□□□□ 0.89
U2AF1-201ENST00000291552 MRM2Q9UI43 246 aaKnown RBP20.6■□□□□ 0.89
U2AF1-201ENST00000291552 R4GMQ9 66 aa20.6■□□□□ 0.89
U2AF1-201ENST00000291552 V9GYS6 101 aa20.6■□□□□ 0.89
U2AF1-201ENST00000291552 TRBV23-1A0A0A0MS06 115 aa20.59■□□□□ 0.89
U2AF1-201ENST00000291552 LOC110117498-PIK3R3F6TDL0 507 aa20.59■□□□□ 0.89
U2AF1-201ENST00000291552 NRASP01111 189 aa20.59■□□□□ 0.89
U2AF1-201ENST00000291552 PGA5P0DJD9 388 aa20.59■□□□□ 0.89
U2AF1-201ENST00000291552 CEBPDP49716 269 aaPredicted RBP20.59■□□□□ 0.89
U2AF1-201ENST00000291552 DEFA6Q01524 100 aa20.59■□□□□ 0.89
U2AF1-201ENST00000291552 ZNF684Q5T5D7 378 aa20.59■□□□□ 0.89
U2AF1-201ENST00000291552 NXNL2Q5VZ03 156 aa20.59■□□□□ 0.89
U2AF1-201ENST00000291552 NCR3LG1Q68D85 454 aa20.59■□□□□ 0.89
U2AF1-201ENST00000291552 DHRS7BQ6IAN0 325 aaPredicted RBP20.59■□□□□ 0.89
U2AF1-201ENST00000291552 SSX6Q7RTT6 188 aa20.59■□□□□ 0.89
U2AF1-201ENST00000291552 ELMOD2Q8IZ81 293 aa20.59■□□□□ 0.89
U2AF1-201ENST00000291552 FAM185AQ8N0U4 392 aa20.59■□□□□ 0.89
U2AF1-201ENST00000291552 OR14K1Q8NGZ2 314 aa20.59■□□□□ 0.89
U2AF1-201ENST00000291552 MOB1AQ9H8S9 216 aa20.59■□□□□ 0.89
U2AF1-201ENST00000291552 GTF2A1LQ9UNN4 478 aa20.59■□□□□ 0.89
U2AF1-201ENST00000291552 PQLC2LA1A4F0 135 aa20.58■□□□□ 0.89
U2AF1-201ENST00000291552 RFPL4AA6NLU0 287 aa20.58■□□□□ 0.89
U2AF1-201ENST00000291552 RFPL4AL1F8VTS6 287 aa20.58■□□□□ 0.89
U2AF1-201ENST00000291552 J3QT63 122 aa20.58■□□□□ 0.89
U2AF1-201ENST00000291552 DYNC1I1O14576 645 aa20.58■□□□□ 0.89
U2AF1-201ENST00000291552 CLVS2Q5SYC1 327 aa20.58■□□□□ 0.89
U2AF1-201ENST00000291552 BCL2L15Q5TBC7 163 aa20.58■□□□□ 0.89
U2AF1-201ENST00000291552 KDM4DQ6B0I6 523 aa20.58■□□□□ 0.89
U2AF1-201ENST00000291552 Q6ZSR3 168 aa20.58■□□□□ 0.89
U2AF1-201ENST00000291552 IL4I1Q96RQ9 567 aa20.58■□□□□ 0.89
U2AF1-201ENST00000291552 PRRG3Q9BZD7 231 aa20.58■□□□□ 0.89
U2AF1-201ENST00000291552 GABARAPL1Q9H0R8 117 aa20.58■□□□□ 0.89
U2AF1-201ENST00000291552 CLN6Q9NWW5 311 aa20.58■□□□□ 0.89
U2AF1-201ENST00000291552 RASL12Q9NYN1 266 aa20.58■□□□□ 0.89
U2AF1-201ENST00000291552 OR52A1Q9UKL2 312 aa20.58■□□□□ 0.89
U2AF1-201ENST00000291552 SLC22A31A6NKX4 558 aa20.57■□□□□ 0.88
U2AF1-201ENST00000291552 HAAOP46952 286 aa20.57■□□□□ 0.88
U2AF1-201ENST00000291552 ACSM1Q08AH1 577 aa20.57■□□□□ 0.88
U2AF1-201ENST00000291552 SMIM21Q3B7S5 101 aa20.57■□□□□ 0.88
U2AF1-201ENST00000291552 BATF2Q8N1L9 274 aa20.57■□□□□ 0.88
U2AF1-201ENST00000291552 BEND2Q8NDZ0 799 aa20.57■□□□□ 0.88
U2AF1-201ENST00000291552 NRIP2Q9BQI9 281 aa20.57■□□□□ 0.88
U2AF1-201ENST00000291552 SLC22A13Q9Y226 551 aa20.57■□□□□ 0.88
U2AF1-201ENST00000291552 BTBD17A6NE02 478 aa20.56■□□□□ 0.88
U2AF1-201ENST00000291552 A6NIN4 97 aa20.56■□□□□ 0.88
U2AF1-201ENST00000291552 ZNF670-ZNF695F2Z2N8 137 aa20.56■□□□□ 0.88
U2AF1-201ENST00000291552 NOS1APO75052 506 aaPredicted RBP20.56■□□□□ 0.88
U2AF1-201ENST00000291552 TSPAN9O75954 239 aa20.56■□□□□ 0.88
U2AF1-201ENST00000291552 PAHP00439 452 aa20.56■□□□□ 0.88
U2AF1-201ENST00000291552 CAPZA1P52907 286 aa20.56■□□□□ 0.88
U2AF1-201ENST00000291552 BNIP1Q12981 228 aa20.56■□□□□ 0.88
U2AF1-201ENST00000291552 MKXQ8IYA7 352 aa20.56■□□□□ 0.88
U2AF1-201ENST00000291552 C11orf42Q8N5U0 333 aa20.56■□□□□ 0.88
U2AF1-201ENST00000291552 OR5R1Q8NH85 324 aa20.56■□□□□ 0.88
U2AF1-201ENST00000291552 MNTQ99583 582 aa20.56■□□□□ 0.88
U2AF1-201ENST00000291552 RBM4BQ9BQ04 359 aaKnown RBP20.56■□□□□ 0.88
U2AF1-201ENST00000291552 HES4Q9HCC6 221 aa20.56■□□□□ 0.88
U2AF1-201ENST00000291552 TET2Q6N021 2002 aaPredicted RBP20.56■□□□□ 0.88
U2AF1-201ENST00000291552 H0YAE9 185 aa20.55■□□□□ 0.88
U2AF1-201ENST00000291552 M0QZ24 198 aa20.55■□□□□ 0.88
U2AF1-201ENST00000291552 DLGAP1O14490 977 aa20.55■□□□□ 0.88
U2AF1-201ENST00000291552 ANGPTL7O43827 346 aa20.55■□□□□ 0.88
U2AF1-201ENST00000291552 CCL1P22362 96 aa20.55■□□□□ 0.88
U2AF1-201ENST00000291552 MPZP25189 248 aa20.55■□□□□ 0.88
U2AF1-201ENST00000291552 PAX6P26367 422 aa20.55■□□□□ 0.88
U2AF1-201ENST00000291552 EGR3Q06889 387 aa20.55■□□□□ 0.88
U2AF1-201ENST00000291552 BLMHQ13867 455 aa20.55■□□□□ 0.88
U2AF1-201ENST00000291552 MIDNQ504T8 468 aa20.55■□□□□ 0.88
U2AF1-201ENST00000291552 PDLIM3Q53GG5 364 aaPredicted RBP20.55■□□□□ 0.88
U2AF1-201ENST00000291552 AMIGO2Q86SJ2 522 aa20.55■□□□□ 0.88
U2AF1-201ENST00000291552 ZNF573Q86YE8 665 aa20.55■□□□□ 0.88
U2AF1-201ENST00000291552 OR5D13Q8NGL4 314 aa20.55■□□□□ 0.88
U2AF1-201ENST00000291552 RORBQ92753 470 aa20.55■□□□□ 0.88
U2AF1-201ENST00000291552 G3V2T6 193 aa20.54■□□□□ 0.88
U2AF1-201ENST00000291552 H3BUX3 64 aa20.54■□□□□ 0.88
U2AF1-201ENST00000291552 TIMM23O14925 209 aa20.54■□□□□ 0.88
U2AF1-201ENST00000291552 PRDX2P32119 198 aa20.54■□□□□ 0.88
U2AF1-201ENST00000291552 TMEM200BQ69YZ2 307 aa20.54■□□□□ 0.88
U2AF1-201ENST00000291552 ASRGL1Q7L266 308 aa20.54■□□□□ 0.88
U2AF1-201ENST00000291552 CALHM1Q8IU99 346 aa20.54■□□□□ 0.88
U2AF1-201ENST00000291552 GID4Q8IVV7 300 aa20.54■□□□□ 0.88
U2AF1-201ENST00000291552 OR51G2Q8NGK0 314 aa20.54■□□□□ 0.88
U2AF1-201ENST00000291552 TBX5Q99593 518 aa20.54■□□□□ 0.88
U2AF1-201ENST00000291552 MMP27Q9H306 513 aa20.54■□□□□ 0.88
U2AF1-201ENST00000291552 H2AFY2Q9P0M6 372 aaPredicted RBP20.54■□□□□ 0.88
U2AF1-201ENST00000291552 SNX5Q9Y5X3 404 aa20.54■□□□□ 0.88
U2AF1-201ENST00000291552 MEGF11A6BM72 1044 aa20.53■□□□□ 0.88
U2AF1-201ENST00000291552 TSPAN15O95858 294 aa20.53■□□□□ 0.88
U2AF1-201ENST00000291552 POLR2IP36954 125 aaKnown RBP20.53■□□□□ 0.88
U2AF1-201ENST00000291552 TGFBR2P37173 567 aa20.53■□□□□ 0.88
U2AF1-201ENST00000291552 ERVFRD-1P60508 538 aa20.53■□□□□ 0.88
U2AF1-201ENST00000291552 ERVK11-1P61568 191 aa20.53■□□□□ 0.88
U2AF1-201ENST00000291552 RPL31P62899 125 aaKnown RBP20.53■□□□□ 0.88
U2AF1-201ENST00000291552 ZNF273Q14593 569 aa20.53■□□□□ 0.88
U2AF1-201ENST00000291552 ZNF561Q8N587 486 aa20.53■□□□□ 0.88
U2AF1-201ENST00000291552 CIB1Q99828 191 aa20.53■□□□□ 0.88
U2AF1-201ENST00000291552 PPA2Q9H2U2 334 aa20.53■□□□□ 0.88
U2AF1-201ENST00000291552 TCF7L1Q9HCS4 588 aa20.53■□□□□ 0.88
U2AF1-201ENST00000291552 SF3B6Q9Y3B4 125 aaKnown RBP20.53■□□□□ 0.88
U2AF1-201ENST00000291552 DHRS7CA6NNS2 312 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms