RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 RAB12Q6IQ22 244 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 SEZ6L2Q6UXD5 910 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 ANKRD13BQ86YJ7 626 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 OR1J1Q8NGS3 322 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 OR1S1Q8NH92 325 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 FCAMRQ8WWV6 532 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 RNASE6Q93091 150 aaKnown RBP7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 SYT3Q9BQG1 590 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 NICN1Q9BSH3 213 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 STEAP1Q9UHE8 339 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 ENPP5Q9UJA9 477 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 SLC25A15Q9Y619 301 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 ITPR1Q14643 2758 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 MEIKINA0A087WXM9 373 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 ALDOBP05062 364 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 S100A6P06703 90 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 CCL1P22362 96 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 COX7A1P24310 79 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 PCSK6P29122 969 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 SOWAHCQ53LP3 525 aaPredicted RBP7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 CD200R1LQ6Q8B3 271 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 STAC2Q6ZMT1 411 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 C1orf87Q8N0U7 546 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 MS4A15Q8N5U1 240 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 DGCR14Q96DF8 476 aaKnown RBP7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 BARHL1Q9BZE3 327 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 SELENOIQ9C0D9 397 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 SHARPINQ9H0F6 387 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 NOX3Q9HBY0 568 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 G6PC2Q9NQR9 355 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 LAMA5O15230 3695 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 IGKV3-7A0A075B6H7 116 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 A0A0U1RQV5 110 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 MEGF11A6BM72 1044 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 C3orf80F5H4A9 247 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 RER1O15258 196 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 GOSR1O95249 250 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 IGLV3-1P01715 115 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 TK1P04183 234 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 ANXA7P20073 488 aaKnown RBP7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 OR2G6Q5TZ20 316 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 ZNF554Q86TJ5 538 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 HPSE2Q8WWQ2 592 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 BBC3Q96PG8 261 aaPredicted RBP7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 C1QTNF5Q9BXJ0 243 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 ABCG5Q9H222 651 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 LSM5Q9Y4Y9 91 aaKnown RBP7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 DMXL2Q8TDJ6 3036 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 MED12LQ86YW9 2145 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 DHRS7CA6NNS2 312 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 CD300LBA8K4G0 201 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 EPXP11678 715 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 RAB3BP20337 219 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 GNLYP22749 145 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 ZNF616Q08AN1 781 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 HIKESHIQ53FT3 197 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 ZMAT1Q5H9K5 638 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 PABPC1L2AQ5JQF8 200 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 AADACL3Q5VUY0 350 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 LIPNQ5VXI9 398 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 CROCCP3Q8IVE0 287 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 OR10X1Q8NGY0 326 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 EMG1Q92979 244 aaKnown RBP7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 C10orf35Q96D05 121 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 PGLYRP3Q96LB9 341 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 C4orf45Q96LM5 186 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 STUB1Q9UNE7 303 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 PIGLQ9Y2B2 252 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 FAM221AA4D161 298 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 C16orf97H3BN30 126 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 LRRTM2O43300 516 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 ACSM4P0C7M7 580 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 PATE4P0C8F1 98 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 ACHEP22303 614 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 GLRA1P23415 457 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 FOXG1P55316 489 aaPredicted RBP7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 COLCA1Q6ZS62 124 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 PRSS45Q7RTY3 260 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 OR52H1Q8NGJ2 320 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 OR10K1Q8NGX5 313 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 LOC390937A0A1W2PQ73 354 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 F5H0A9 414 aaPredicted RBP7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 ATP6V1G1O75348 118 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 STOMP27105 288 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 BLVRBP30043 206 aaPredicted RBP7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 ART1P52961 327 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 RAB1AP62820 205 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 FOXB2Q5VYV0 432 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 ZNF774Q6NX45 483 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 FAHD2BQ6P2I3 314 aaPredicted RBP7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 MDP1Q86V88 176 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 PHC2Q8IXK0 858 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 PRSS35Q8N3Z0 413 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 OR2Z1Q8NG97 314 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 SMAP2Q8WU79 429 aaPredicted RBP7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 TMEM106AQ96A25 262 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 FAHD2AQ96GK7 314 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 WDR12Q9GZL7 423 aaKnown RBP7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 TREM1Q9NP99 234 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 ACANP16112 2415 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms