RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ATG4DQ86TL0 474 aaPredicted RBP11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 EXD3Q8N9H8 876 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 PRRX2Q99811 253 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 PIGLQ9Y2B2 252 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 DOCK9Q9BZ29 2069 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 EPOPA6NHQ4 379 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 OR4C45A6NMZ5 311 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 ANKRD30BLA7E2S9 258 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 HSBP1O75506 76 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 GDF1P27539 372 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 OR5I1Q13606 314 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 PLXDC2Q6UX71 529 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 YRDCQ86U90 279 aaKnown RBP11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 TM4SF19Q96DZ7 209 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 EP300Q09472 2414 aaPredicted RBP11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 SOX15O60248 233 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 ADAP1O75689 374 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 RAB5AP20339 215 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 KLF9Q13886 244 aaPredicted RBP11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 OR1N1Q8NGS0 311 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 ZNRF4Q8WWF5 429 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 PRR13Q9NZ81 148 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 SH3BGRL2Q9UJC5 107 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 IGHV3-64DA0A0J9YX35 117 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 FTCDNL1E5RQL4 147 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 J3QR89 54 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 RER1O15258 196 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 LAMTOR5O43504 91 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 WDR1O75083 606 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 ACAA1P09110 424 aaPredicted RBP11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 IAPPP10997 89 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 GHITMQ9H3K2 345 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 NLRC5Q86WI3 1866 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 ANKRD20A5PA0PJZ0 165 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 METTL12A8MUP2 240 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 ADAM11O75078 769 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 HEXAP06865 529 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 APOBEC1P41238 236 aaKnown RBP11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 UBE2G2P60604 165 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 CATR1Q13166 79 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 MISPQ8IVT2 679 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 IL22RA1Q8N6P7 574 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 BHLHE23Q8NDY6 225 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 OR52N4Q8NGI2 321 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 PACRGQ96M98 296 aaPredicted RBP11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 FSCN3Q9NQT6 498 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 KCNIP2Q9NS61 270 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 DNAJB11Q9UBS4 358 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 PIN1P1O15428 100 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 SPINK4O60575 86 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 FOLR3P41439 243 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 NOVA1P51513 510 aaKnown RBP11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 ZNF121P58317 390 aaPredicted RBP11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 UBE2NP61088 152 aaKnown RBP11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 HIST1H3AP68431 136 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 ANKRD16Q6P6B7 361 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 PCOLCE2Q9UKZ9 415 aa11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 SPTBN1Q01082 2364 aaKnown RBP11.18□□□□□ -0.62
SLC6A1-201ENST00000287766 A0A087WV48 116 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 MBTPS2O43462 519 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 TOX4O94842 621 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 CD96P40200 585 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 PDCD1Q15116 288 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 SLC16A14Q7RTX9 510 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 PUSL1Q8N0Z8 303 aaKnown RBP11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 SLC38A9Q8NBW4 561 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 PTPMT1Q8WUK0 201 aaPredicted RBP11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 LIPHQ8WWY8 451 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 HGDQ93099 445 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 GNG12Q9UBI6 72 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 AQP7P3A6NL99 342 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 GPR37O15354 613 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 GATCO43716 136 aaKnown RBP11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 IGHV4-34P06331 123 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 PCK2Q16822 640 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 OR2B11Q5JQS5 317 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 ZNF684Q5T5D7 378 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 AAED1Q7RTV5 226 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 OR10G3Q8NGC4 313 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 KISS1RQ969F8 398 aaPredicted RBP11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 PHYHIPLQ96FC7 376 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 SLC35D1Q9NTN3 355 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 RNF212BA8MTL3 300 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 HLA-DQB1P01920 261 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 IL9P15248 144 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 FAHP16930 419 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 MYBPHQ13203 477 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 PTCRAQ6ISU1 281 aaPredicted RBP11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 GCNT2Q8N0V5 402 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 OR5B3Q8NH48 314 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 RHOVQ96L33 236 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 ECI1P42126 302 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 GSK3AP49840 483 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 SLC35A1P78382 337 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 SKP2Q13309 424 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 INPP5JQ15735 1006 aaPredicted RBP11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 KIF26BQ2KJY2 2108 aa11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 MSI2Q96DH6 328 aaKnown RBP11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 CCNL2Q96S94 520 aaPredicted RBP11.17□□□□□ -0.62
SLC6A1-201ENST00000287766 CDH20Q9HBT6 801 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms