RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 RGCCQ9H4X1 137 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 TBC1D24Q9ULP9 559 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 AMDHD2Q9Y303 409 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 GEMIN2O14893 280 aaKnown RBP11.37□□□□□ -0.59
ACER3-201ENST00000278544 TPD52L2O43399 206 aaKnown RBP11.37□□□□□ -0.59
ACER3-201ENST00000278544 BLVRBP30043 206 aaPredicted RBP11.37□□□□□ -0.59
ACER3-201ENST00000278544 CHRNB4P30926 498 aa11.37□□□□□ -0.59
ACER3-201ENST00000278544 ATP1B3P54709 279 aa11.37□□□□□ -0.59
ACER3-201ENST00000278544 OR8G1Q15617 311 aa11.37□□□□□ -0.59
ACER3-201ENST00000278544 ZNF718Q3SXZ3 478 aa11.37□□□□□ -0.59
ACER3-201ENST00000278544 CREB3L1Q96BA8 519 aa11.37□□□□□ -0.59
ACER3-201ENST00000278544 ITPKCQ96DU7 683 aa11.37□□□□□ -0.59
ACER3-201ENST00000278544 ARHGAP5-AS1Q96IT6 56 aa11.37□□□□□ -0.59
ACER3-201ENST00000278544 KCNJ16Q9NPI9 418 aa11.37□□□□□ -0.59
ACER3-201ENST00000278544 CDC14BO60729 498 aa11.37□□□□□ -0.59
ACER3-201ENST00000278544 OR7C1O76099 320 aaPredicted RBP11.37□□□□□ -0.59
ACER3-201ENST00000278544 CEBPDP49716 269 aaPredicted RBP11.37□□□□□ -0.59
ACER3-201ENST00000278544 NKPD1Q17RQ9 610 aa11.37□□□□□ -0.59
ACER3-201ENST00000278544 FAM201AQ5SY85 155 aa11.37□□□□□ -0.59
ACER3-201ENST00000278544 RSBN1Q5VWQ0 802 aaPredicted RBP11.37□□□□□ -0.59
ACER3-201ENST00000278544 CCDC36Q8IYA8 594 aa11.37□□□□□ -0.59
ACER3-201ENST00000278544 SPSB4Q96A44 273 aa11.37□□□□□ -0.59
ACER3-201ENST00000278544 WDR13Q9H1Z4 485 aa11.37□□□□□ -0.59
ACER3-201ENST00000278544 ARPC4-TTLL3A0A0A6YYG9 625 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 UBE2QL1A1L167 161 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 WIPF3A6NGB9 483 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 WNT9BO14905 357 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 CDNFQ49AH0 187 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 C1orf100Q5SVJ3 147 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 OR52W1Q6IF63 320 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 ZNF529Q6P280 563 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 Q6ZR03 302 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 Q6ZTK2 550 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 TGIF2LYQ8IUE0 185 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 FTMTQ8N4E7 242 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 BPIFB2Q8N4F0 458 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 PIGMQ9H3S5 423 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 OR14J1Q9UGF5 321 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 PURGQ9UJV8 347 aaKnown RBP11.36□□□□□ -0.59
ACER3-201ENST00000278544 TUBAL3A6NHL2 446 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 TMEM108Q6UXF1 575 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 C1orf147Q96MC9 270 aaPredicted RBP11.36□□□□□ -0.59
ACER3-201ENST00000278544 MICU1Q9BPX6 476 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 MRPL37Q9BZE1 423 aaKnown RBP11.36□□□□□ -0.59
ACER3-201ENST00000278544 ABCG5Q9H222 651 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 NLKQ9UBE8 527 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 MLNRO43193 412 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 IGLV1-44P01699 117 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 GDNFP39905 211 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 CCR6P51684 374 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 PDZK1IP1Q13113 114 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 WDR86Q86TI4 376 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 LYPD6Q86Y78 171 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 CELF2-AS1Q8N7Q2 184 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 UBALD1Q8TB05 177 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 LPAR5Q9H1C0 372 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 TAAR3PQ9P1P4 343 aa11.36□□□□□ -0.59
ACER3-201ENST00000278544 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.35□□□□□ -0.59
ACER3-201ENST00000278544 HS3ST1O14792 307 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 PRF1P14222 555 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 FUT6P51993 359 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 CCL8P80075 99 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 ARFRP1Q13795 201 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 GDPD3Q7L5L3 318 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 NEK7Q8TDX7 302 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 FOXRED1Q96CU9 486 aaPredicted RBP11.35□□□□□ -0.59
ACER3-201ENST00000278544 CA10Q9NS85 328 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 ST3GAL6Q9Y274 331 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 USP9YO00507 2555 aaPredicted RBP11.35□□□□□ -0.59
ACER3-201ENST00000278544 CELSR2Q9HCU4 2923 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 METTL21EPA6NDL7 271 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 M0QYG6 137 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 PLA2G10O15496 165 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 ORC5O43913 435 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 PYHIN1Q6K0P9 492 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 TOMM5Q8N4H5 51 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 OR4D10Q8NGI6 311 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 TMEM100Q9NV29 134 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 MTCH1Q9NZJ7 389 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 ATPIF1Q9UII2 106 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 TRAV6A0A075B6T7 132 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 TRAV39A0A0B4J263 110 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 RAB27BO00194 218 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 PRKACAP17612 351 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 PRKACBP22694 351 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 PLAC9Q5JTB6 97 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 DPPA2Q7Z7J5 298 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 YIPF5Q969M3 257 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 PIK3IP1Q96FE7 263 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 UQCC2Q9BRT2 126 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 FAAP24Q9BTP7 215 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 ST6GALNAC5Q9BVH7 336 aa11.35□□□□□ -0.59
ACER3-201ENST00000278544 LOC390937A0A1W2PQ73 354 aa11.34□□□□□ -0.59
ACER3-201ENST00000278544 PLSCR5A0PG75 271 aa11.34□□□□□ -0.59
ACER3-201ENST00000278544 ZSCAN5BA6NJL1 495 aa11.34□□□□□ -0.59
ACER3-201ENST00000278544 RNF224P0DH78 156 aa11.34□□□□□ -0.59
ACER3-201ENST00000278544 TMEM50BP56557 158 aa11.34□□□□□ -0.59
ACER3-201ENST00000278544 ZNF154Q13106 437 aa11.34□□□□□ -0.59
ACER3-201ENST00000278544 PCGF3Q3KNV8 242 aa11.34□□□□□ -0.59
ACER3-201ENST00000278544 CEACAM21Q3KPI0 293 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms