RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 RAP1BP61224 184 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 RAP1AP62834 184 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 C4orf17Q53FE4 359 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 SOHLH1Q5JUK2 328 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 Q6ZS52 159 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 HIST2H3AQ71DI3 136 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 OR10D4PQ8NGN7 298 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 S100PBPQ96BU1 408 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 FAAP24Q9BTP7 215 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 PECRQ9BY49 303 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 ZNF700Q9H0M5 742 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 PRO1933Q9H354 126 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 SERINC1Q9NRX5 453 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 LUZP4Q9P127 313 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 COL6A3P12111 3177 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 IFITM10A6NMD0 228 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 PPIHO43447 177 aaKnown RBP11.34□□□□□ -0.59
COL8A1-202ENST00000273342 RGS19P49795 217 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 TAF9Q16594 264 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 DEFB133Q30KQ1 61 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 OPN5Q6U736 354 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 LRRC18Q8N456 261 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 C17orf78Q8N4C9 275 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 OR11L1Q8NGX0 322 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 LMX1AQ8TE12 382 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 TMPRSS5Q9H3S3 457 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 FAM86C1Q9NVL1 165 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 PARPBPQ9NWS1 579 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 PADI1Q9ULC6 663 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 SPTY2D1-AS1A0A0U1RR47 76 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 CXorf65A6NEN9 183 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 SCGNO76038 276 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 ARL4DP49703 201 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 SUMF2Q8NBJ7 301 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 OR1J1Q8NGS3 322 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 MARS2Q96GW9 593 aaKnown RBP11.33□□□□□ -0.6
COL8A1-202ENST00000273342 CCDC85CA6NKD9 419 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 FIGNL2A6NMB9 653 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 H0YL77 283 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 IFNA17P01571 189 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 IGHV4-34P06331 123 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 S100A2P29034 98 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 CAPZBP47756 277 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 CSNK1EP49674 416 aaKnown RBP11.33□□□□□ -0.6
COL8A1-202ENST00000273342 TAS2R46P59540 309 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 YPEL5P62699 121 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 GABREP78334 506 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 SLC35A1P78382 337 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 DEFA6Q01524 100 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 ABCA11PQ4W5N1 156 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 DEGS2Q6QHC5 323 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 SPNS3Q6ZMD2 512 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 STT3BQ8TCJ2 826 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 SCRT1Q9BWW7 348 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 SLC35B3Q9H1N7 401 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 CHST11Q9NPF2 352 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 OBP2AQ9NY56 170 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 A0A1B0GV90 55 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 ZNF814B7Z6K7 855 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 SPRY1O43609 319 aaPredicted RBP11.33□□□□□ -0.6
COL8A1-202ENST00000273342 DANCRP0C864 163 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 OR5H8P0DN80 308 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 GABRG2P18507 467 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 MDKP21741 143 aaPredicted RBP11.33□□□□□ -0.6
COL8A1-202ENST00000273342 RABIFP47224 123 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 FAM3AP98173 230 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 C5orf24Q7Z6I8 188 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 FAM131CQ96AQ9 280 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 PGAM5Q96HS1 289 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 SHDQ96IW2 340 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 VN1R1Q9GZP7 353 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 MTIF3Q9H2K0 278 aaKnown RBP11.33□□□□□ -0.6
COL8A1-202ENST00000273342 NELFAQ9H3P2 528 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 DOK5Q9P104 306 aa11.33□□□□□ -0.6
COL8A1-202ENST00000273342 FRYQ5TBA9 3013 aa11.32□□□□□ -0.6
COL8A1-202ENST00000273342 ONECUT2O95948 504 aa11.32□□□□□ -0.6
COL8A1-202ENST00000273342 GPX4P36969 197 aaPredicted RBP11.32□□□□□ -0.6
COL8A1-202ENST00000273342 TAGLN2P37802 199 aaKnown RBP11.32□□□□□ -0.6
COL8A1-202ENST00000273342 ZNF84P51523 738 aa11.32□□□□□ -0.6
COL8A1-202ENST00000273342 HSD11B2P80365 405 aa11.32□□□□□ -0.6
COL8A1-202ENST00000273342 NSUN5P2Q63ZY6 315 aa11.32□□□□□ -0.6
COL8A1-202ENST00000273342 FAM180AQ6UWF9 173 aa11.32□□□□□ -0.6
COL8A1-202ENST00000273342 GPR61Q9BZJ8 451 aa11.32□□□□□ -0.6
COL8A1-202ENST00000273342 TGIF2Q9GZN2 237 aa11.32□□□□□ -0.6
COL8A1-202ENST00000273342 MAGT1Q9H0U3 335 aa11.32□□□□□ -0.6
COL8A1-202ENST00000273342 NCOA6Q14686 2063 aaPredicted RBP11.32□□□□□ -0.6
COL8A1-202ENST00000273342 BORCS7-ASMTA0A0B4J1R7 106 aa11.32□□□□□ -0.6
COL8A1-202ENST00000273342 EFNA2O43921 213 aa11.32□□□□□ -0.6
COL8A1-202ENST00000273342 CXCL1P09341 107 aa11.32□□□□□ -0.6
COL8A1-202ENST00000273342 HTR5AP47898 357 aa11.32□□□□□ -0.6
COL8A1-202ENST00000273342 LBX1P52954 281 aa11.32□□□□□ -0.6
COL8A1-202ENST00000273342 UBE2V2Q15819 145 aa11.32□□□□□ -0.6
COL8A1-202ENST00000273342 UNQ6494/PRO21346Q6UXR6 183 aa11.32□□□□□ -0.6
COL8A1-202ENST00000273342 FBXW12Q6X9E4 464 aa11.32□□□□□ -0.6
COL8A1-202ENST00000273342 TMEM217Q8N7C4 229 aa11.32□□□□□ -0.6
COL8A1-202ENST00000273342 UBAC2Q8NBM4 344 aa11.32□□□□□ -0.6
COL8A1-202ENST00000273342 MEGF10Q96KG7 1140 aa11.32□□□□□ -0.6
COL8A1-202ENST00000273342 TGIF2-C20orf24A0A0A6YYL0 155 aa11.31□□□□□ -0.6
COL8A1-202ENST00000273342 FAM24AA6NFZ4 105 aa11.31□□□□□ -0.6
COL8A1-202ENST00000273342 DBHP09172 617 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms