RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 OOEPA6NGQ2 149 aa10.67□□□□□ -0.7
SS18-202ENST00000269138 TNFRSF13BO14836 293 aaPredicted RBP10.67□□□□□ -0.7
SS18-202ENST00000269138 SULT1B1O43704 296 aa10.67□□□□□ -0.7
SS18-202ENST00000269138 GYPAP02724 150 aa10.67□□□□□ -0.7
SS18-202ENST00000269138 TFF1P04155 84 aa10.67□□□□□ -0.7
SS18-202ENST00000269138 CPEP16870 476 aa10.67□□□□□ -0.7
SS18-202ENST00000269138 MPZP25189 248 aa10.67□□□□□ -0.7
SS18-202ENST00000269138 RBP2P50120 134 aa10.67□□□□□ -0.7
SS18-202ENST00000269138 ATP1B3P54709 279 aa10.67□□□□□ -0.7
SS18-202ENST00000269138 GPR50Q13585 617 aa10.67□□□□□ -0.7
SS18-202ENST00000269138 ACSM3Q53FZ2 586 aa10.67□□□□□ -0.7
SS18-202ENST00000269138 ARMCX4Q5H9R4 360 aa10.67□□□□□ -0.7
SS18-202ENST00000269138 FAM27D1Q5T7N8 215 aa10.67□□□□□ -0.7
SS18-202ENST00000269138 TEX36Q5VZQ5 186 aa10.67□□□□□ -0.7
SS18-202ENST00000269138 UNQ9370/PRO34162Q6UXP9 181 aa10.67□□□□□ -0.7
SS18-202ENST00000269138 Q71RC1 249 aaPredicted RBP10.67□□□□□ -0.7
SS18-202ENST00000269138 PHC2Q8IXK0 858 aa10.67□□□□□ -0.7
SS18-202ENST00000269138 OR5T2Q8NGG2 359 aa10.67□□□□□ -0.7
SS18-202ENST00000269138 ZNF671Q8TAW3 534 aa10.67□□□□□ -0.7
SS18-202ENST00000269138 SPSB1Q96BD6 273 aa10.67□□□□□ -0.7
SS18-202ENST00000269138 MSI2Q96DH6 328 aaKnown RBP10.67□□□□□ -0.7
SS18-202ENST00000269138 DERL3Q96Q80 235 aa10.67□□□□□ -0.7
SS18-202ENST00000269138 SNTG1Q9NSN8 517 aa10.67□□□□□ -0.7
SS18-202ENST00000269138 PCDHB10Q9UN67 800 aa10.67□□□□□ -0.7
SS18-202ENST00000269138 SF3B6Q9Y3B4 125 aaKnown RBP10.67□□□□□ -0.7
SS18-202ENST00000269138 MAGEA13PA6NCF6 341 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 F8VVB4 439 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 F8VWA3 439 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 ALX3O95076 343 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 FSTL3O95633 263 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 HCKP08631 526 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 OCMP0CE72 109 aaPredicted RBP10.66□□□□□ -0.7
SS18-202ENST00000269138 IGFBP3P17936 291 aaPredicted RBP10.66□□□□□ -0.7
SS18-202ENST00000269138 RAB3AP20336 220 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 TGFBR2P37173 567 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 POU3F4P49335 361 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 GP2P55259 537 aaKnown RBP10.66□□□□□ -0.7
SS18-202ENST00000269138 SEC61A1P61619 476 aaKnown RBP10.66□□□□□ -0.7
SS18-202ENST00000269138 SSX1Q16384 188 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 UBE2UQ5VVX9 321 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 CLEC9AQ6UXN8 241 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 LHFPL2Q6ZUX7 228 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 SLC25A26Q70HW3 274 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 BIVMQ86UB2 503 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 MUC20Q8N307 709 aaPredicted RBP10.66□□□□□ -0.7
SS18-202ENST00000269138 SPICQ8N5J4 248 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 MS4A15Q8N5U1 240 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 POC1AQ8NBT0 407 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 OR52N4Q8NGI2 321 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 OR5D18Q8NGL1 313 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 SLAMF9Q96A28 289 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 C1orf159Q96HA4 380 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 PKIBQ9C010 78 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 PPIL3Q9H2H8 161 aaKnown RBP10.66□□□□□ -0.7
SS18-202ENST00000269138 PATZ1Q9HBE1 687 aaKnown RBP10.66□□□□□ -0.7
SS18-202ENST00000269138 LPAR2Q9HBW0 351 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 NOX4Q9NPH5 578 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 MTCH1Q9NZJ7 389 aa10.66□□□□□ -0.7
SS18-202ENST00000269138 TEP1Q99973 2627 aaKnown RBP10.65□□□□□ -0.7
SS18-202ENST00000269138 TRAV38-1A0A0B4J264 116 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 A0A1B0GW55 424 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 F5H0A9 414 aaPredicted RBP10.65□□□□□ -0.7
SS18-202ENST00000269138 SPRY1O43609 319 aaPredicted RBP10.65□□□□□ -0.7
SS18-202ENST00000269138 ANGPTL7O43827 346 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 GPX5O75715 221 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 WNT2P09544 360 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 DUX4L2P0CJ85 424 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 DUX4L3P0CJ86 424 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 DUX4L4P0CJ87 422 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 DUX4L5P0CJ88 424 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 DUX4L6P0CJ89 424 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 DUX4L7P0CJ90 424 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 PGA5P0DJD9 388 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 ZNF16P17020 682 aaPredicted RBP10.65□□□□□ -0.7
SS18-202ENST00000269138 AMY2BP19961 511 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 GLRA1P23415 457 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 PSMB9P28065 219 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 GZMKP49863 264 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 IL24Q13007 206 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 PDZK1IP1Q13113 114 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 CYB5R2Q6BCY4 276 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 DUX4L9Q6RFH8 374 aaPredicted RBP10.65□□□□□ -0.7
SS18-202ENST00000269138 TMEM91Q6ZNR0 172 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 CEACAM19Q7Z692 300 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 SATL1Q86VE3 508 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 NRIP2Q9BQI9 281 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 DNAJB11Q9UBS4 358 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 DUX4Q9UBX2 424 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 POLDIP2Q9Y2S7 368 aa10.65□□□□□ -0.7
SS18-202ENST00000269138 YLPM1P49750 1951 aaKnown RBP10.65□□□□□ -0.7
SS18-202ENST00000269138 ABCA1O95477 2261 aa10.65□□□□□ -0.71
SS18-202ENST00000269138 IGKV1-12A0A0C4DH73 117 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 CD5LO43866 347 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 NOS1APO75052 506 aaPredicted RBP10.64□□□□□ -0.71
SS18-202ENST00000269138 SC5DO75845 299 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 TNFAIP8O95379 198 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 IGKV1D-12P01611 117 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 RPS2P15880 293 aaKnown RBP10.64□□□□□ -0.71
SS18-202ENST00000269138 MUC1P15941 1255 aaPredicted RBP10.64□□□□□ -0.71
SS18-202ENST00000269138 ZFP36P26651 326 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms