RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 GABRA6Q16445 453 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 STAC2Q6ZMT1 411 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 SMIM4Q8WVI0 70 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 ZDHHC16Q969W1 377 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 RSRP1Q9BUV0 290 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 OR2D2Q9H210 308 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 SOX21Q9Y651 276 aaPredicted RBP10.91□□□□□ -0.66
SRRM4-201ENST00000267260 MFNGO00587 321 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 ZNF749O43361 778 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 SHBQ15464 509 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 FAAP20Q6NZ36 180 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 SLC36A1Q7Z2H8 476 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 SIRT7Q9NRC8 400 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 ALPK2Q86TB3 2170 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 ISLRO14498 428 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 TAPBPO15533 448 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 CD40P25942 277 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 OPRM1P35372 400 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 POLR2IP36954 125 aaKnown RBP10.91□□□□□ -0.66
SRRM4-201ENST00000267260 DIO1P49895 249 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 MRGPRX4Q96LA9 322 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 FBXO4Q9UKT5 387 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 MAP1LC3B2A6NCE7 125 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 CAMPP49913 170 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 ZNF121P58317 390 aaPredicted RBP10.91□□□□□ -0.66
SRRM4-201ENST00000267260 DUSP5Q16690 384 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 ZNF766Q5HY98 468 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 C12orf54Q6X4T0 127 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 MAP1LC3BQ9GZQ8 125 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 MSL2Q9HCI7 577 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 FGF21Q9NSA1 209 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 TAAR3PQ9P1P4 343 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 CACNA1BQ00975 2339 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 GAL3ST2Q9H3Q3 398 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.91□□□□□ -0.66
SRRM4-201ENST00000267260 M0R1B8 84 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 PLPP1O14494 284 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 RAB29O14966 203 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 NKAIN2Q5VXU1 208 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 C6orf15Q6UXA7 325 aaPredicted RBP10.91□□□□□ -0.66
SRRM4-201ENST00000267260 ZNF740Q8NDX6 193 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 OR52B4Q8NGK2 314 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 PERPQ96FX8 193 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 SDF2Q99470 211 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 THBS4P35443 961 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 CLPPQ16740 277 aaPredicted RBP10.91□□□□□ -0.66
SRRM4-201ENST00000267260 DPPA3Q6W0C5 159 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 PELI3Q8N2H9 469 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 LPAR5Q9H1C0 372 aa10.91□□□□□ -0.66
SRRM4-201ENST00000267260 CD22P20273 847 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 OR1D5P58170 312 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 ISL1P61371 349 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 TMEM174Q8WUU8 243 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 DOCK3Q8IZD9 2030 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 OOEPA6NGQ2 149 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 DNASE2O00115 360 aaPredicted RBP10.9□□□□□ -0.66
SRRM4-201ENST00000267260 HMGN4O00479 90 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 RBP4P02753 201 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 ERVS71-1P61550 626 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 TP53INP2Q8IXH6 220 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 BCORP1Q8N888 145 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 MRPL43Q8N983 215 aaKnown RBP10.9□□□□□ -0.66
SRRM4-201ENST00000267260 NUP37Q8NFH4 326 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 CST7O76096 145 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 MBPP02686 304 aaPredicted RBP10.9□□□□□ -0.66
SRRM4-201ENST00000267260 LIMK1P53667 647 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 NKAIN1Q4KMZ8 207 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 FAM71E1Q6IPT2 247 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 PARD6GQ9BYG4 376 aaPredicted RBP10.9□□□□□ -0.66
SRRM4-201ENST00000267260 WNK3Q9BYP7 1800 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 CD1BP29016 333 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 WDR31Q8NA23 367 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 C5orf17Q8NAS9 161 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 MISP3Q96FF7 219 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 PLSCR3Q9NRY6 295 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 SLC7A10Q9NS82 523 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 PIPOXQ9P0Z9 390 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 ZNF646O15015 1829 aaPredicted RBP10.9□□□□□ -0.66
SRRM4-201ENST00000267260 RAG2P55895 527 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 VN1R2Q8NFZ6 395 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 OR1L6Q8NGR2 347 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 SRD5A3Q9H8P0 318 aa10.9□□□□□ -0.66
SRRM4-201ENST00000267260 RBFOX3A6NFN3 312 aa10.9□□□□□ -0.67
SRRM4-201ENST00000267260 IFITM10A6NMD0 228 aa10.9□□□□□ -0.67
SRRM4-201ENST00000267260 GPANK1O95872 356 aa10.9□□□□□ -0.67
SRRM4-201ENST00000267260 TNFRSF1AP19438 455 aa10.9□□□□□ -0.67
SRRM4-201ENST00000267260 PCP4P48539 62 aa10.9□□□□□ -0.67
SRRM4-201ENST00000267260 SCAND1P57086 179 aa10.9□□□□□ -0.67
SRRM4-201ENST00000267260 D2HGDHQ8N465 521 aa10.9□□□□□ -0.67
SRRM4-201ENST00000267260 NUDCD2Q8WVJ2 157 aa10.9□□□□□ -0.67
SRRM4-201ENST00000267260 TMEM167BQ9NRX6 74 aa10.9□□□□□ -0.67
SRRM4-201ENST00000267260 IGSF23A1L1A6 192 aa10.9□□□□□ -0.67
SRRM4-201ENST00000267260 TNFSF11O14788 317 aa10.9□□□□□ -0.67
SRRM4-201ENST00000267260 RPS4Y1P22090 263 aaKnown RBP10.9□□□□□ -0.67
SRRM4-201ENST00000267260 TIAL1Q01085 375 aaKnown RBP eCLIP10.9□□□□□ -0.67
SRRM4-201ENST00000267260 KLRB1Q12918 225 aa10.9□□□□□ -0.67
SRRM4-201ENST00000267260 MOB3BQ86TA1 216 aa10.9□□□□□ -0.67
SRRM4-201ENST00000267260 C10orf126Q8N4M7 172 aa10.9□□□□□ -0.67
SRRM4-201ENST00000267260 FAM117AQ9C073 453 aa10.9□□□□□ -0.67
SRRM4-201ENST00000267260 AKIP1Q9NQ31 210 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms