RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 ZNF525Q8N782 197 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 OR52N4Q8NGI2 321 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 ZNF671Q8TAW3 534 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 CPNE2Q96FN4 548 aaPredicted RBP12□□□□□ -0.49
SSBP1-201ENST00000265304 NRIP2Q9BQI9 281 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 UQCC2Q9BRT2 126 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 OR51E2Q9H255 320 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 METTL17Q9H7H0 456 aaPredicted RBP12□□□□□ -0.49
SSBP1-201ENST00000265304 HES4Q9HCC6 221 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 RASL12Q9NYN1 266 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 SCOCQ9UIL1 159 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 SSR3Q9UNL2 185 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 ZNF469Q96JG9 3925 aaPredicted RBP12□□□□□ -0.49
SSBP1-201ENST00000265304 SHISA3A0PJX4 238 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 CYSRT1A8MQ03 144 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 LYNX1G3V0Z9 82 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 TPD52L2O43399 206 aaKnown RBP11.99□□□□□ -0.49
SSBP1-201ENST00000265304 GRPP07492 148 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 LYNX1P0DP58 116 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 HAAOP46952 286 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 PSMD7P51665 324 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 TEX36Q5VZQ5 186 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 ELP2Q6IA86 826 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 SLC16A12Q6ZSM3 486 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 ZNF826PQ6ZT77 177 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 TPRA1Q86W33 373 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 LRRC28Q86X40 367 aaPredicted RBP11.99□□□□□ -0.49
SSBP1-201ENST00000265304 C1orf87Q8N0U7 546 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 POC1AQ8NBT0 407 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 OR11L1Q8NGX0 322 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 CCL17Q92583 94 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 RPL3LQ92901 407 aaKnown RBP11.99□□□□□ -0.49
SSBP1-201ENST00000265304 FOXRED1Q96CU9 486 aaPredicted RBP11.99□□□□□ -0.49
SSBP1-201ENST00000265304 GFI1Q99684 422 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 FUNDC2Q9BWH2 189 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 TCF7L1Q9HCS4 588 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 C1orf123Q9NWV4 160 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 DCAF16Q9NXF7 216 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 IL36GQ9NZH8 169 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 GSTK1Q9Y2Q3 226 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 POLDIP2Q9Y2S7 368 aa11.99□□□□□ -0.49
SSBP1-201ENST00000265304 FAM230AA0A1W2PPH8 454 aa11.98□□□□□ -0.49
SSBP1-201ENST00000265304 CDC14BO60729 498 aa11.98□□□□□ -0.49
SSBP1-201ENST00000265304 RHBDL1O75783 438 aa11.98□□□□□ -0.49
SSBP1-201ENST00000265304 IGHV2-70P01814 119 aa11.98□□□□□ -0.49
SSBP1-201ENST00000265304 MTNR1BP49286 362 aa11.98□□□□□ -0.49
SSBP1-201ENST00000265304 CLEC12BQ2HXU8 276 aa11.98□□□□□ -0.49
SSBP1-201ENST00000265304 TMEM155Q4W5P6 130 aa11.98□□□□□ -0.49
SSBP1-201ENST00000265304 Q5PR19 223 aa11.98□□□□□ -0.49
SSBP1-201ENST00000265304 ATPAF1Q5TC12 328 aaPredicted RBP11.98□□□□□ -0.49
SSBP1-201ENST00000265304 HAGHLQ6PII5 290 aaPredicted RBP11.98□□□□□ -0.49
SSBP1-201ENST00000265304 CLEC2AQ6UVW9 174 aa11.98□□□□□ -0.49
SSBP1-201ENST00000265304 SPNS3Q6ZMD2 512 aa11.98□□□□□ -0.49
SSBP1-201ENST00000265304 ANGPTL5Q86XS5 388 aa11.98□□□□□ -0.49
SSBP1-201ENST00000265304 MKXQ8IYA7 352 aa11.98□□□□□ -0.49
SSBP1-201ENST00000265304 ZNF420Q8TAQ5 688 aaPredicted RBP11.98□□□□□ -0.49
SSBP1-201ENST00000265304 FAM168AQ92567 244 aa11.98□□□□□ -0.49
SSBP1-201ENST00000265304 C12orf43Q96C57 262 aaKnown RBP11.98□□□□□ -0.49
SSBP1-201ENST00000265304 C1orf147Q96MC9 270 aaPredicted RBP11.98□□□□□ -0.49
SSBP1-201ENST00000265304 BCL7BQ9BQE9 202 aa11.98□□□□□ -0.49
SSBP1-201ENST00000265304 TMEM165Q9HC07 324 aa11.98□□□□□ -0.49
SSBP1-201ENST00000265304 UFSP2Q9NUQ7 469 aa11.98□□□□□ -0.49
SSBP1-201ENST00000265304 MTCH1Q9NZJ7 389 aa11.98□□□□□ -0.49
SSBP1-201ENST00000265304 NPTNQ9Y639 398 aa11.98□□□□□ -0.49
SSBP1-201ENST00000265304 CELSR1Q9NYQ6 3014 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 F8P00451 2351 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 IGKV1-12A0A0C4DH73 117 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 CLDN25C9JDP6 229 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 MAGEB3O15480 346 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 SYNGR1O43759 233 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 TMEM127O75204 238 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 KDM4BO94953 1096 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 GABARAPO95166 117 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 IGKV1D-12P01611 117 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 MUC1P15941 1255 aaPredicted RBP11.97□□□□□ -0.49
SSBP1-201ENST00000265304 SLC25A16P16260 332 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 CALRP27797 417 aaKnown RBP11.97□□□□□ -0.49
SSBP1-201ENST00000265304 ZNF93P35789 620 aaPredicted RBP11.97□□□□□ -0.49
SSBP1-201ENST00000265304 PTGFRP43088 359 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 NR4A2P43354 598 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 ART1P52961 327 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 CTF1Q16619 201 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 DDI2Q5TDH0 399 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 C22orf42Q6IC83 251 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 Q8IYB0 196 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 TRMT10AQ8TBZ6 339 aaKnown RBP11.97□□□□□ -0.49
SSBP1-201ENST00000265304 NPRL2Q8WTW4 380 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 RAB1CQ92928 201 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 SLC25A28Q96A46 364 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 POM121Q96HA1 1249 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 KCTD7Q96MP8 289 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 CENPOQ9BU64 300 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 DNTTIP1Q9H147 329 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 SLITRK2Q9H156 845 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 WIPI2Q9Y4P8 454 aa11.97□□□□□ -0.49
SSBP1-201ENST00000265304 ARHGAP32A7KAX9 2087 aa11.96□□□□□ -0.49
SSBP1-201ENST00000265304 PPIAL4EA0A075B759 164 aa11.96□□□□□ -0.49
SSBP1-201ENST00000265304 IGHV4-30-2A0A087WSY4 118 aa11.96□□□□□ -0.49
SSBP1-201ENST00000265304 A0A0G2JK05 382 aa11.96□□□□□ -0.49
SSBP1-201ENST00000265304 IGHV3-64DA0A0J9YX35 117 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms