RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 GABRA4P48169 554 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 SELENOPP49908 381 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 CD300CQ08708 224 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 ST3GAL2Q16842 350 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 SP6Q3SY56 376 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 MYO16Q9Y6X6 1858 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 PNLIPP16233 465 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 ZXDCQ2QGD7 858 aaPredicted RBP12.41□□□□□ -0.42
CDH3-201ENST00000264012 LCN15Q6UWW0 184 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 IL34Q6ZMJ4 242 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 MAP6Q96JE9 813 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 FN3KRPQ9HA64 309 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 STRAPQ9Y3F4 350 aaKnown RBP12.41□□□□□ -0.42
CDH3-201ENST00000264012 GALR2O43603 387 aaPredicted RBP12.4□□□□□ -0.42
CDH3-201ENST00000264012 TNFRSF1AP19438 455 aa12.4□□□□□ -0.42
CDH3-201ENST00000264012 DHRS2Q13268 280 aa12.4□□□□□ -0.42
CDH3-201ENST00000264012 PRSS53Q2L4Q9 553 aa12.4□□□□□ -0.42
CDH3-201ENST00000264012 FAM74A1Q5RGS3 127 aa12.4□□□□□ -0.42
CDH3-201ENST00000264012 OR2M3Q8NG83 312 aa12.4□□□□□ -0.42
CDH3-201ENST00000264012 ST8SIA2Q92186 375 aa12.4□□□□□ -0.42
CDH3-201ENST00000264012 COMMD5Q9GZQ3 224 aa12.4□□□□□ -0.42
CDH3-201ENST00000264012 PDCD6O75340 191 aa12.4□□□□□ -0.42
CDH3-201ENST00000264012 SOX8P57073 446 aa12.4□□□□□ -0.42
CDH3-201ENST00000264012 TMPRSS7Q7RTY8 843 aa12.4□□□□□ -0.42
CDH3-201ENST00000264012 OR13G1Q8NGZ3 307 aa12.4□□□□□ -0.42
CDH3-201ENST00000264012 CIB3Q96Q77 187 aaPredicted RBP12.4□□□□□ -0.42
CDH3-201ENST00000264012 MARVELD1Q9BSK0 173 aa12.4□□□□□ -0.42
CDH3-201ENST00000264012 GCM2O75603 506 aaPredicted RBP12.4□□□□□ -0.42
CDH3-201ENST00000264012 MAGEA5P43359 124 aa12.4□□□□□ -0.42
CDH3-201ENST00000264012 PSENENQ9NZ42 101 aa12.4□□□□□ -0.42
CDH3-201ENST00000264012 ZFC3H1O60293 1989 aaKnown RBP12.4□□□□□ -0.43
CDH3-201ENST00000264012 TRGV10A0A0A0MS01 117 aa12.4□□□□□ -0.43
CDH3-201ENST00000264012 RFPL4AA6NLU0 287 aa12.4□□□□□ -0.43
CDH3-201ENST00000264012 RFPL4AL1F8VTS6 287 aa12.4□□□□□ -0.43
CDH3-201ENST00000264012 PTP4A3O75365 173 aa12.4□□□□□ -0.43
CDH3-201ENST00000264012 SCAF4O95104 1147 aaKnown RBP12.4□□□□□ -0.43
CDH3-201ENST00000264012 DEFA6Q01524 100 aa12.4□□□□□ -0.43
CDH3-201ENST00000264012 MRGPREQ86SM8 312 aa12.4□□□□□ -0.43
CDH3-201ENST00000264012 MUC20Q8N307 709 aaPredicted RBP12.4□□□□□ -0.43
CDH3-201ENST00000264012 PRSS27Q9BQR3 290 aa12.4□□□□□ -0.43
CDH3-201ENST00000264012 C20orf24Q9BUV8 137 aa12.4□□□□□ -0.43
CDH3-201ENST00000264012 KCNK15Q9H427 330 aa12.4□□□□□ -0.43
CDH3-201ENST00000264012 BCL2L11O43521 198 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 PPP1R1AQ13522 171 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 C11orf87Q6NUJ2 197 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 OR10AC1Q8NH08 325 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 CLDN23Q96B33 292 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 UCN2Q96RP3 112 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 NGFP01138 241 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 MT-ND4LP03901 98 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 RPS16P62249 146 aaKnown RBP12.39□□□□□ -0.43
CDH3-201ENST00000264012 ZNF770Q6IQ21 691 aaPredicted RBP12.39□□□□□ -0.43
CDH3-201ENST00000264012 TAAR6Q96RI8 345 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 GNG13Q9P2W3 67 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 H3BP45 60 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 GNB1P62873 340 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 HAGHQ16775 308 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 NAA40Q86UY6 237 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 TUSC5Q8IXB3 177 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 ZFP62Q8NB50 900 aaPredicted RBP12.39□□□□□ -0.43
CDH3-201ENST00000264012 CMTM2Q8TAZ6 248 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 MRPS18AQ9NVS2 196 aaKnown RBP12.39□□□□□ -0.43
CDH3-201ENST00000264012 FZR1Q9UM11 496 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 LIFP15018 202 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 ZNF816Q0VGE8 651 aaPredicted RBP12.39□□□□□ -0.43
CDH3-201ENST00000264012 FUT5Q11128 374 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 MOB1BQ7L9L4 216 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 SLC25A45Q8N413 288 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 HGDQ93099 445 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 LHX4Q969G2 390 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 ST6GAL2Q96JF0 529 aa12.39□□□□□ -0.43
CDH3-201ENST00000264012 ANKRD20A5PA0PJZ0 165 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 AQP7O14520 342 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 SEMG1P04279 462 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 C3AR1Q16581 482 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 NUFIP2Q7Z417 695 aaKnown RBP12.38□□□□□ -0.43
CDH3-201ENST00000264012 C15orf54Q8N8G6 183 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 ZBTB44Q8NCP5 570 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 PLPPR2Q96GM1 343 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 TMEM231Q9H6L2 316 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 MED9Q9NWA0 146 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 TAAR3PQ9P1P4 343 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 V9GYH0 126 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 CKAP5Q14008 2032 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 MYOFQ9NZM1 2061 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 SSX2Q16385 188 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 TMEM123Q8N131 208 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 GVQW1Q8N7I0 195 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 DUSP18Q8NEJ0 188 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 BTF3L4Q96K17 158 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 MIXL1Q9H2W2 232 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 HIF1ANQ9NWT6 349 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 RCL1Q9Y2P8 373 aaKnown RBP12.38□□□□□ -0.43
CDH3-201ENST00000264012 C4orf51C9J302 202 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 ZIC2O95409 532 aaPredicted RBP12.38□□□□□ -0.43
CDH3-201ENST00000264012 LIMK1P53667 647 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 PPP1CBP62140 327 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 C9orf152Q5JTZ5 239 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 DCAF10Q5QP82 559 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 ZNF485Q8NCK3 441 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms