RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 FGF7P21781 194 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 POLR2IP36954 125 aaKnown RBP12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 SLC37A1P57057 533 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 HIST2H3PS2Q5TEC6 136 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 MED9Q9NWA0 146 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 CALCRP30988 508 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 FAM209AQ5JX71 171 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 TMEM105Q8N8V8 129 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 GNPNAT1Q96EK6 184 aaPredicted RBP12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 C10orf90Q96M02 699 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 SLC25A10Q9UBX3 287 aaPredicted RBP12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 LANCL1O43813 399 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 SNAPINO95295 136 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 COX5AP20674 150 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 ID1P41134 155 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 MDP1Q86V88 176 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 SCNM1Q9BWG6 230 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 TMEM127O75204 238 aa12.02□□□□□ -0.48
PDGFRB-201ENST00000261799 PATE4P0C8F1 98 aa12.02□□□□□ -0.48
PDGFRB-201ENST00000261799 TMEM251Q8N6I4 163 aa12.02□□□□□ -0.48
PDGFRB-201ENST00000261799 RPL3LQ92901 407 aaKnown RBP12.02□□□□□ -0.48
PDGFRB-201ENST00000261799 LRRC3BQ96PB8 259 aa12.02□□□□□ -0.48
PDGFRB-201ENST00000261799 ICAM5Q9UMF0 924 aa12.02□□□□□ -0.48
PDGFRB-201ENST00000261799 ADAMTSL1Q8N6G6 1762 aa12.02□□□□□ -0.48
PDGFRB-201ENST00000261799 H3BMH7 237 aa12.02□□□□□ -0.48
PDGFRB-201ENST00000261799 CTDSP2O14595 271 aa12.02□□□□□ -0.48
PDGFRB-201ENST00000261799 ST3GAL2Q16842 350 aa12.02□□□□□ -0.48
PDGFRB-201ENST00000261799 C1QL3Q5VWW1 255 aa12.02□□□□□ -0.48
PDGFRB-201ENST00000261799 DYNC2LI1Q8TCX1 351 aa12.02□□□□□ -0.48
PDGFRB-201ENST00000261799 OR2D2Q9H210 308 aa12.02□□□□□ -0.48
PDGFRB-201ENST00000261799 FOXJ2Q9P0K8 574 aa12.02□□□□□ -0.48
PDGFRB-201ENST00000261799 LSM6P62312 80 aaKnown RBP12.02□□□□□ -0.49
PDGFRB-201ENST00000261799 RPL7L1Q6DKI1 246 aaKnown RBP12.02□□□□□ -0.49
PDGFRB-201ENST00000261799 DEGS2Q6QHC5 323 aa12.02□□□□□ -0.49
PDGFRB-201ENST00000261799 CES1P1Q9UKY3 287 aa12.02□□□□□ -0.49
PDGFRB-201ENST00000261799 TCRBP04435 133 aa12.02□□□□□ -0.49
PDGFRB-201ENST00000261799 OR4S1Q8NGB4 309 aa12.02□□□□□ -0.49
PDGFRB-201ENST00000261799 ZNF721Q8TF20 911 aa12.02□□□□□ -0.49
PDGFRB-201ENST00000261799 PF4P02776 101 aa12.02□□□□□ -0.49
PDGFRB-201ENST00000261799 HRH1P35367 487 aa12.02□□□□□ -0.49
PDGFRB-201ENST00000261799 SELENOPP49908 381 aa12.02□□□□□ -0.49
PDGFRB-201ENST00000261799 MRPS11P82912 194 aaKnown RBP12.02□□□□□ -0.49
PDGFRB-201ENST00000261799 KISS1Q15726 138 aa12.02□□□□□ -0.49
PDGFRB-201ENST00000261799 RFESDQ8TAC1 157 aa12.02□□□□□ -0.49
PDGFRB-201ENST00000261799 INSIG2Q9Y5U4 225 aa12.02□□□□□ -0.49
PDGFRB-201ENST00000261799 POMT1Q9Y6A1 747 aa12.02□□□□□ -0.49
PDGFRB-201ENST00000261799 CLEC18AA5D8T8 446 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 CLEC2LP0C7M8 214 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 PRSS45Q7RTY3 260 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 CLEC18CQ8NCF0 446 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 NUDCD2Q8WVJ2 157 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 UQCC2Q9BRT2 126 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 CLEC5AQ9NY25 188 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 MAGEB4O15481 346 aaPredicted RBP12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 ZNF273Q14593 569 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 UNQ9370/PRO34162Q6UXP9 181 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 TMEM182Q6ZP80 229 aaPredicted RBP12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 GOLT1BQ9Y3E0 138 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 HMX2A2RU54 273 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 ZNF716A6NP11 495 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 IL5P05113 134 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 RRASP10301 218 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 ZNF260Q3ZCT1 412 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 SKA3Q8IX90 412 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 C9orf40Q8IXQ3 194 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 OR5B3Q8NH48 314 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 RNF141Q8WVD5 230 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 HSD17B10Q99714 261 aaKnown RBP12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 TAF9BQ9HBM6 251 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 LOC101059948A0A1B0GTJ6 334 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 TAAR5O14804 337 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 CNN1P51911 297 aaKnown RBP12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 TGIF1Q15583 401 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 ADIRFQ15847 76 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 ZBTB37Q5TC79 503 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 SLC25A42Q86VD7 318 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 ZNF439Q8NDP4 499 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 TMEM74BQ9NUR3 256 aa12.01□□□□□ -0.49
PDGFRB-201ENST00000261799 FABP7O15540 132 aa12□□□□□ -0.49
PDGFRB-201ENST00000261799 GABRA6Q16445 453 aa12□□□□□ -0.49
PDGFRB-201ENST00000261799 RNF165Q6ZSG1 346 aa12□□□□□ -0.49
PDGFRB-201ENST00000261799 CCDC71Q8IV32 467 aaPredicted RBP12□□□□□ -0.49
PDGFRB-201ENST00000261799 OR4S2Q8NH73 311 aa12□□□□□ -0.49
PDGFRB-201ENST00000261799 VSTM2LQ96N03 204 aa12□□□□□ -0.49
PDGFRB-201ENST00000261799 TMEM38BQ9NVV0 291 aa12□□□□□ -0.49
PDGFRB-201ENST00000261799 TINAGQ9UJW2 476 aa12□□□□□ -0.49
PDGFRB-201ENST00000261799 FAM106CPP0CH98 169 aa12□□□□□ -0.49
PDGFRB-201ENST00000261799 LPAR6P43657 344 aa12□□□□□ -0.49
PDGFRB-201ENST00000261799 CCR6P51684 374 aa12□□□□□ -0.49
PDGFRB-201ENST00000261799 YBX1P67809 324 aaKnown RBP12□□□□□ -0.49
PDGFRB-201ENST00000261799 SSBP1Q04837 148 aaKnown RBP12□□□□□ -0.49
PDGFRB-201ENST00000261799 OPCMLQ14982 345 aa12□□□□□ -0.49
PDGFRB-201ENST00000261799 AVPI1Q5T686 147 aa12□□□□□ -0.49
PDGFRB-201ENST00000261799 LFNGQ8NES3 379 aa12□□□□□ -0.49
PDGFRB-201ENST00000261799 OR13C5Q8NGS8 318 aa12□□□□□ -0.49
PDGFRB-201ENST00000261799 OR8U1Q8NH10 309 aa12□□□□□ -0.49
PDGFRB-201ENST00000261799 NRG4Q8WWG1 115 aa12□□□□□ -0.49
PDGFRB-201ENST00000261799 TMUB1Q9BVT8 246 aa12□□□□□ -0.49
PDGFRB-201ENST00000261799 AKR7A2O43488 359 aa12□□□□□ -0.49
PDGFRB-201ENST00000261799 SEMG1P04279 462 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms