RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 HIST2H3PS2Q5TEC6 136 aa16.6■□□□□ 0.25
COL4A3BP-201ENST00000261415 ADPRHL1Q8NDY3 354 aa16.6■□□□□ 0.25
COL4A3BP-201ENST00000261415 TSPAN32Q96QS1 320 aa16.6■□□□□ 0.25
COL4A3BP-201ENST00000261415 SLITRK2Q9H156 845 aa16.6■□□□□ 0.25
COL4A3BP-201ENST00000261415 DEFB127Q9H1M4 99 aa16.6■□□□□ 0.25
COL4A3BP-201ENST00000261415 ATG5Q9H1Y0 275 aa16.6■□□□□ 0.25
COL4A3BP-201ENST00000261415 BSNQ9UPA5 3926 aa16.6■□□□□ 0.25
COL4A3BP-201ENST00000261415 DSPP15924 2871 aaKnown RBP16.6■□□□□ 0.25
COL4A3BP-201ENST00000261415 H7C1Q1 480 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 SUCLG1P53597 346 aaKnown RBP16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 RAB1AP62820 205 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 CSNK2A1P68400 391 aaPredicted RBP16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 CDK5R1Q15078 307 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 RHEBQ15382 184 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 EIF5AL1Q6IS14 154 aaKnown RBP16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 OR52E2Q8NGJ4 325 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 OR4K13Q8NH42 304 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 AKR1E2Q96JD6 320 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 ADGRG7Q96K78 797 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 RGCCQ9H4X1 137 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 GRHPRQ9UBQ7 328 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 OR5V1Q9UGF6 321 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 ELOA3CA0A087WX78 387 aaPredicted RBP16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 A0A1W2PNV4 684 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 ZNF814B7Z6K7 855 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 FCGR3AP08637 254 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 HLA-DOBP13765 273 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 GTF2F2P13984 249 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 CD80P33681 288 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 LHX2P50458 406 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 ZNF85Q03923 595 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 CRMP1Q14194 572 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 AWAT2Q6E213 333 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 SPNS3Q6ZMD2 512 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 OR5R1Q8NH85 324 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 KISS1RQ969F8 398 aaPredicted RBP16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 R3HDM4Q96D70 268 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 OR14A2Q96R54 314 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 FN3KRPQ9HA64 309 aa16.59■□□□□ 0.25
COL4A3BP-201ENST00000261415 FAM157AC9JC47 383 aa16.58■□□□□ 0.25
COL4A3BP-201ENST00000261415 XRCC3O43542 346 aa16.58■□□□□ 0.25
COL4A3BP-201ENST00000261415 TXNDC12O95881 172 aa16.58■□□□□ 0.25
COL4A3BP-201ENST00000261415 KLK2P20151 261 aa16.58■□□□□ 0.25
COL4A3BP-201ENST00000261415 NDUFA6P56556 154 aa16.58■□□□□ 0.25
COL4A3BP-201ENST00000261415 CLDN15P56746 228 aa16.58■□□□□ 0.25
COL4A3BP-201ENST00000261415 RAP1AP62834 184 aa16.58■□□□□ 0.25
COL4A3BP-201ENST00000261415 H3F3AP84243 136 aa16.58■□□□□ 0.25
COL4A3BP-201ENST00000261415 CYB561A3Q8NBI2 242 aa16.58■□□□□ 0.25
COL4A3BP-201ENST00000261415 OR1J2Q8NGS2 313 aa16.58■□□□□ 0.25
COL4A3BP-201ENST00000261415 OR1J1Q8NGS3 322 aa16.58■□□□□ 0.25
COL4A3BP-201ENST00000261415 SRXN1Q9BYN0 137 aa16.58■□□□□ 0.25
COL4A3BP-201ENST00000261415 SYT4Q9H2B2 425 aa16.58■□□□□ 0.25
COL4A3BP-201ENST00000261415 B3GAT1Q9P2W7 334 aa16.58■□□□□ 0.25
COL4A3BP-201ENST00000261415 ZNF346Q9UL40 294 aaKnown RBP16.58■□□□□ 0.25
COL4A3BP-201ENST00000261415 SVILO95425 2214 aa16.58■□□□□ 0.24
COL4A3BP-201ENST00000261415 AQP7P3A6NL99 342 aa16.58■□□□□ 0.24
COL4A3BP-201ENST00000261415 CRTAPO75718 401 aaPredicted RBP16.58■□□□□ 0.24
COL4A3BP-201ENST00000261415 IGHMP01871 453 aa16.58■□□□□ 0.24
COL4A3BP-201ENST00000261415 ACKR1Q16570 336 aa16.58■□□□□ 0.24
COL4A3BP-201ENST00000261415 EMC4Q5J8M3 183 aa16.58■□□□□ 0.24
COL4A3BP-201ENST00000261415 PAQR4Q8N4S7 273 aaPredicted RBP16.58■□□□□ 0.24
COL4A3BP-201ENST00000261415 NDUFAF3Q9BU61 184 aa16.58■□□□□ 0.24
COL4A3BP-201ENST00000261415 GPR61Q9BZJ8 451 aa16.58■□□□□ 0.24
COL4A3BP-201ENST00000261415 TXNIPQ9H3M7 391 aa16.58■□□□□ 0.24
COL4A3BP-201ENST00000261415 MED20Q9H944 212 aa16.58■□□□□ 0.24
COL4A3BP-201ENST00000261415 DOK5Q9P104 306 aa16.58■□□□□ 0.24
COL4A3BP-201ENST00000261415 LAMP5Q9UJQ1 280 aa16.58■□□□□ 0.24
COL4A3BP-201ENST00000261415 TMED3Q9Y3Q3 217 aa16.58■□□□□ 0.24
COL4A3BP-201ENST00000261415 RPL36A-HNRNPH2H7BZ11 118 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 DNPH1O43598 174 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 GPRIN2O60269 458 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 PMP2P02689 132 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 PGAM2P15259 253 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 CLDN18P56856 261 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 SCAND1P57086 179 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 RAC3P60763 192 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 RPS11P62280 158 aaKnown RBP eCLIP16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 POU3F1Q03052 451 aaPredicted RBP16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 MESTQ5EB52 335 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 THEM4Q5T1C6 240 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 RPL22L1Q6P5R6 122 aaKnown RBP16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 ZNF433Q8N7K0 673 aaPredicted RBP16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 OR2V1Q8NHB1 315 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 NMNAT3Q96T66 252 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 HCAR1Q9BXC0 346 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 PRO1933Q9H354 126 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 NOP16Q9Y3C1 178 aaKnown RBP16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 GTF3C1Q12789 2109 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 TRGV5A0A0B4J1U4 118 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 M0R036 132 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 RAMP1O60894 148 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 ZNF708P17019 499 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 CARD18P57730 90 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 RPL27P61353 136 aaKnown RBP16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 TMEM225Q6GV28 225 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 ACBD4Q8NC06 268 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 OR10D3Q8NH80 312 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 TAAR6Q96RI8 345 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 GFI1Q99684 422 aa16.57■□□□□ 0.24
COL4A3BP-201ENST00000261415 NOX4Q9NPH5 578 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms