RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 PRRT1Q99946 306 aa23.85■■□□□ 1.41
CCM2-201ENST00000258781 SEC22CQ9BRL7 303 aa23.85■■□□□ 1.41
CCM2-201ENST00000258781 PECRQ9BY49 303 aa23.85■■□□□ 1.41
CCM2-201ENST00000258781 SERPINE3A8MV23 424 aa23.84■■□□□ 1.41
CCM2-201ENST00000258781 ANGPTL7O43827 346 aa23.84■■□□□ 1.41
CCM2-201ENST00000258781 CREBL2O60519 120 aaPredicted RBP23.84■■□□□ 1.41
CCM2-201ENST00000258781 HTR3BO95264 441 aa23.84■■□□□ 1.41
CCM2-201ENST00000258781 ZNF14P17017 642 aaPredicted RBP23.84■■□□□ 1.41
CCM2-201ENST00000258781 ERP29P30040 261 aaKnown RBP23.84■■□□□ 1.41
CCM2-201ENST00000258781 GZMKP49863 264 aa23.84■■□□□ 1.41
CCM2-201ENST00000258781 MRPS15P82914 257 aaKnown RBP23.84■■□□□ 1.41
CCM2-201ENST00000258781 PDZK1IP1Q13113 114 aa23.84■■□□□ 1.41
CCM2-201ENST00000258781 PPA1Q15181 289 aa23.84■■□□□ 1.41
CCM2-201ENST00000258781 TBC1D28Q2M2D7 210 aa23.84■■□□□ 1.41
CCM2-201ENST00000258781 ZNF626Q68DY1 528 aa23.84■■□□□ 1.41
CCM2-201ENST00000258781 ZNF585AQ6P3V2 769 aa23.84■■□□□ 1.41
CCM2-201ENST00000258781 C1orf162Q8NEQ5 155 aaPredicted RBP23.84■■□□□ 1.41
CCM2-201ENST00000258781 ST8SIA4Q92187 359 aa23.84■■□□□ 1.41
CCM2-201ENST00000258781 SLC6A7Q99884 636 aa23.84■■□□□ 1.41
CCM2-201ENST00000258781 PAPOLGQ9BWT3 736 aaKnown RBP23.84■■□□□ 1.41
CCM2-201ENST00000258781 GPR160Q9UJ42 338 aa23.84■■□□□ 1.41
CCM2-201ENST00000258781 RLN1P04808 185 aa23.83■■□□□ 1.41
CCM2-201ENST00000258781 HLXQ14774 488 aaPredicted RBP23.83■■□□□ 1.41
CCM2-201ENST00000258781 VWA1Q6PCB0 445 aa23.83■■□□□ 1.41
CCM2-201ENST00000258781 WBP1Q96G27 269 aa23.83■■□□□ 1.41
CCM2-201ENST00000258781 ALX4Q9H161 411 aaPredicted RBP23.83■■□□□ 1.41
CCM2-201ENST00000258781 PCDHB16Q9NRJ7 776 aa23.83■■□□□ 1.41
CCM2-201ENST00000258781 PLSCR4Q9NRQ2 329 aa23.83■■□□□ 1.41
CCM2-201ENST00000258781 EIF3KQ9UBQ5 218 aaKnown RBP23.83■■□□□ 1.41
CCM2-201ENST00000258781 ZNF222Q9UK12 451 aa23.83■■□□□ 1.41
CCM2-201ENST00000258781 MEIKINA0A087WXM9 373 aa23.83■■□□□ 1.4
CCM2-201ENST00000258781 MBD3L4A6NDZ8 208 aaPredicted RBP23.83■■□□□ 1.4
CCM2-201ENST00000258781 MBD3L3A6NE82 208 aaPredicted RBP23.83■■□□□ 1.4
CCM2-201ENST00000258781 MBD3L5A6NJ08 208 aaPredicted RBP23.83■■□□□ 1.4
CCM2-201ENST00000258781 VSIG10L2P0DP72 767 aa23.83■■□□□ 1.4
CCM2-201ENST00000258781 PRDX4Q13162 271 aa23.83■■□□□ 1.4
CCM2-201ENST00000258781 ARFRP1Q13795 201 aa23.83■■□□□ 1.4
CCM2-201ENST00000258781 ACTBL2Q562R1 376 aa23.83■■□□□ 1.4
CCM2-201ENST00000258781 OR52W1Q6IF63 320 aa23.83■■□□□ 1.4
CCM2-201ENST00000258781 ZSCAN4Q8NAM6 433 aaPredicted RBP23.83■■□□□ 1.4
CCM2-201ENST00000258781 MBD3L2Q8NHZ7 208 aaPredicted RBP23.83■■□□□ 1.4
CCM2-201ENST00000258781 SNRNP40Q96DI7 357 aaKnown RBP23.83■■□□□ 1.4
CCM2-201ENST00000258781 MRPS24Q96EL2 167 aaKnown RBP23.83■■□□□ 1.4
CCM2-201ENST00000258781 POFUT1Q9H488 388 aa23.83■■□□□ 1.4
CCM2-201ENST00000258781 LYZL6O75951 148 aa23.82■■□□□ 1.4
CCM2-201ENST00000258781 CXCL3P19876 107 aa23.82■■□□□ 1.4
CCM2-201ENST00000258781 KRTCAP3Q53RY4 240 aa23.82■■□□□ 1.4
CCM2-201ENST00000258781 SEZ6L2Q6UXD5 910 aa23.82■■□□□ 1.4
CCM2-201ENST00000258781 ZDHHC23Q8IYP9 409 aa23.82■■□□□ 1.4
CCM2-201ENST00000258781 MYOZ1Q9NP98 299 aaPredicted RBP23.82■■□□□ 1.4
CCM2-201ENST00000258781 PQLC2LA1A4F0 135 aa23.81■■□□□ 1.4
CCM2-201ENST00000258781 AKR7A2O43488 359 aa23.81■■□□□ 1.4
CCM2-201ENST00000258781 PLATP00750 562 aa23.81■■□□□ 1.4
CCM2-201ENST00000258781 SNAPC3Q92966 411 aa23.81■■□□□ 1.4
CCM2-201ENST00000258781 IGKV1-12A0A0C4DH73 117 aa23.81■■□□□ 1.4
CCM2-201ENST00000258781 CD300LBA8K4G0 201 aa23.81■■□□□ 1.4
CCM2-201ENST00000258781 IGKV1D-12P01611 117 aa23.81■■□□□ 1.4
CCM2-201ENST00000258781 HRH1P35367 487 aa23.81■■□□□ 1.4
CCM2-201ENST00000258781 MRPL49Q13405 166 aaKnown RBP23.81■■□□□ 1.4
CCM2-201ENST00000258781 CEACAM21Q3KPI0 293 aa23.81■■□□□ 1.4
CCM2-201ENST00000258781 RFPL4BQ6ZWI9 263 aa23.81■■□□□ 1.4
CCM2-201ENST00000258781 SPICQ8N5J4 248 aa23.81■■□□□ 1.4
CCM2-201ENST00000258781 CCDC107Q8WV48 283 aa23.81■■□□□ 1.4
CCM2-201ENST00000258781 SLX1AQ9BQ83 275 aa23.81■■□□□ 1.4
CCM2-201ENST00000258781 ZNF69Q9UC07 566 aa23.81■■□□□ 1.4
CCM2-201ENST00000258781 NPTNQ9Y639 398 aa23.81■■□□□ 1.4
CCM2-201ENST00000258781 TMEM82A0PJX8 343 aa23.8■■□□□ 1.4
CCM2-201ENST00000258781 FOXF2Q12947 444 aa23.8■■□□□ 1.4
CCM2-201ENST00000258781 OR4K15Q8NH41 348 aa23.8■■□□□ 1.4
CCM2-201ENST00000258781 ASF1BQ9NVP2 202 aa23.8■■□□□ 1.4
CCM2-201ENST00000258781 PAIP2BQ9ULR5 123 aaKnown RBP23.8■■□□□ 1.4
CCM2-201ENST00000258781 HSF4Q9ULV5 492 aa23.8■■□□□ 1.4
CCM2-201ENST00000258781 GABRR1P24046 479 aa23.79■■□□□ 1.4
CCM2-201ENST00000258781 PTGER4P35408 488 aa23.79■■□□□ 1.4
CCM2-201ENST00000258781 NKPD1Q17RQ9 610 aa23.79■■□□□ 1.4
CCM2-201ENST00000258781 CD163Q86VB7 1156 aa23.79■■□□□ 1.4
CCM2-201ENST00000258781 OR13C8Q8NGS7 320 aa23.79■■□□□ 1.4
CCM2-201ENST00000258781 FBXW5Q969U6 566 aa23.79■■□□□ 1.4
CCM2-201ENST00000258781 POM121Q96HA1 1249 aa23.79■■□□□ 1.4
CCM2-201ENST00000258781 SMG1Q96Q15 3661 aaKnown RBP23.79■■□□□ 1.4
CCM2-201ENST00000258781 INTS1Q8N201 2190 aaKnown RBP23.79■■□□□ 1.4
CCM2-201ENST00000258781 WDR1O75083 606 aa23.79■■□□□ 1.4
CCM2-201ENST00000258781 TNFSF13O75888 250 aa23.79■■□□□ 1.4
CCM2-201ENST00000258781 CRHP06850 196 aa23.79■■□□□ 1.4
CCM2-201ENST00000258781 TPOP07202 933 aa23.79■■□□□ 1.4
CCM2-201ENST00000258781 SCGB2B2Q4G0G5 96 aa23.79■■□□□ 1.4
CCM2-201ENST00000258781 HOGA1Q86XE5 327 aa23.79■■□□□ 1.4
CCM2-201ENST00000258781 OSR2Q8N2R0 312 aa23.79■■□□□ 1.4
CCM2-201ENST00000258781 OR51F2Q8NH61 342 aa23.79■■□□□ 1.4
CCM2-201ENST00000258781 HPSE2Q8WWQ2 592 aa23.79■■□□□ 1.4
CCM2-201ENST00000258781 UBE2QL1A1L167 161 aa23.78■■□□□ 1.4
CCM2-201ENST00000258781 FABP7O15540 132 aa23.78■■□□□ 1.4
CCM2-201ENST00000258781 CSN2P05814 226 aa23.78■■□□□ 1.4
CCM2-201ENST00000258781 VAX1Q5SQQ9 334 aa23.78■■□□□ 1.4
CCM2-201ENST00000258781 SAXO1Q8IYX7 474 aa23.78■■□□□ 1.4
CCM2-201ENST00000258781 ZNF611Q8N823 705 aa23.78■■□□□ 1.4
CCM2-201ENST00000258781 CAPSLQ8WWF8 208 aa23.78■■□□□ 1.4
CCM2-201ENST00000258781 CDH20Q9HBT6 801 aa23.78■■□□□ 1.4
CCM2-201ENST00000258781 PLEKHJ1Q9NW61 149 aa23.78■■□□□ 1.4
CCM2-201ENST00000258781 CRIM1Q9NZV1 1036 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms