RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 OR51H1Q8NH63 302 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 DCUN1D4Q92564 292 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 ZC3H10Q96K80 434 aaKnown RBP7.91□□□□□ -1.14
CKAP2-201ENST00000258607 CXorf58Q96LI9 332 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 HIST1H2AAQ96QV6 131 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 UTP20O75691 2785 aaKnown RBP7.91□□□□□ -1.14
CKAP2-201ENST00000258607 ARHGAP32A7KAX9 2087 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 COL4A2P08572 1712 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 ABCA2Q9BZC7 2435 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 TRGV5A0A0B4J1U4 118 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 MEGF11A6BM72 1044 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 ZNF732B4DXR9 585 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 SYNGR1O43759 233 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 BMP5P22003 454 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 GLDNQ6ZMI3 551 aaPredicted RBP7.91□□□□□ -1.14
CKAP2-201ENST00000258607 DOK3Q7L591 496 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 ZFAND1Q8TCF1 268 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 ITPKCQ96DU7 683 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 LRFN5Q96NI6 719 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 C12orf10Q9HB07 376 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 TMEM38BQ9NVV0 291 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 TAS2R8Q9NYW2 309 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 IGKV1-27A0A075B6S5 117 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 SLC22A20A6NK97 555 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 TSPAN4O14817 238 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 YKT6O15498 198 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 HPNP05981 417 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 PRKACAP17612 351 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 CD53P19397 219 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 EDDM3AQ14507 147 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 ABCA11PQ4W5N1 156 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 VWA1Q6PCB0 445 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 FAM173AQ9BQD7 235 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 WDR13Q9H1Z4 485 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 SLC26A1Q9H2B4 701 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 OBP2BQ9NPH6 170 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 MBD2Q9UBB5 411 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 RAB22AQ9UL26 194 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 USP9XQ93008 2570 aaPredicted RBP7.9□□□□□ -1.14
CKAP2-201ENST00000258607 GJE1A6NN92 205 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 HSD17B6O14756 317 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 ATXN7O15265 892 aaPredicted RBP7.9□□□□□ -1.14
CKAP2-201ENST00000258607 TPD52L2O43399 206 aaKnown RBP7.9□□□□□ -1.14
CKAP2-201ENST00000258607 MTRF1O75570 445 aaKnown RBP7.9□□□□□ -1.14
CKAP2-201ENST00000258607 RHBDL1O75783 438 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 DHRS3O75911 302 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 HPP00738 406 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 SP1P08047 785 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 UBE2NP61088 152 aaKnown RBP7.9□□□□□ -1.14
CKAP2-201ENST00000258607 RIPPLY1Q0D2K3 151 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 FOXO1Q12778 655 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 FOXF2Q12947 444 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 TRA2AQ13595 282 aaKnown RBP eCLIP7.9□□□□□ -1.14
CKAP2-201ENST00000258607 IGSF11Q5DX21 431 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 C5orf46Q6UWT4 87 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 DCHS2Q6V1P9 2916 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 OR13C8Q8NGS7 320 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 KCNG3Q8TAE7 436 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 SLC25A28Q96A46 364 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 SNX18Q96RF0 628 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 WNT5BQ9H1J7 359 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 ZNF703Q9H7S9 590 aaPredicted RBP7.9□□□□□ -1.14
CKAP2-201ENST00000258607 PNRC2Q9NPJ4 139 aaKnown RBP7.9□□□□□ -1.14
CKAP2-201ENST00000258607 KCNN3Q9UGI6 736 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 SLC7A11Q9UPY5 501 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 ETV7Q9Y603 341 aa7.9□□□□□ -1.14
CKAP2-201ENST00000258607 CELSR1Q9NYQ6 3014 aa7.9□□□□□ -1.15
CKAP2-201ENST00000258607 FLNCQ14315 2725 aa7.9□□□□□ -1.15
CKAP2-201ENST00000258607 DEFB108AA8MXU0 73 aa7.9□□□□□ -1.15
CKAP2-201ENST00000258607 SSX5O60225 188 aa7.9□□□□□ -1.15
CKAP2-201ENST00000258607 CNR1P21554 472 aa7.9□□□□□ -1.15
CKAP2-201ENST00000258607 GSK3AP49840 483 aa7.9□□□□□ -1.15
CKAP2-201ENST00000258607 RBP2P50120 134 aa7.9□□□□□ -1.15
CKAP2-201ENST00000258607 OR56B1Q8NGI3 324 aa7.9□□□□□ -1.15
CKAP2-201ENST00000258607 OR14K1Q8NGZ2 314 aa7.9□□□□□ -1.15
CKAP2-201ENST00000258607 SULT4A1Q9BR01 284 aa7.9□□□□□ -1.15
CKAP2-201ENST00000258607 OR2H1Q9GZK4 316 aa7.9□□□□□ -1.15
CKAP2-201ENST00000258607 OR2J1Q9GZK6 312 aa7.9□□□□□ -1.15
CKAP2-201ENST00000258607 PPA2Q9H2U2 334 aa7.9□□□□□ -1.15
CKAP2-201ENST00000258607 TINAGQ9UJW2 476 aa7.9□□□□□ -1.15
CKAP2-201ENST00000258607 KCNS2Q9ULS6 477 aa7.9□□□□□ -1.15
CKAP2-201ENST00000258607 LOC102723996A0A087X1L8 192 aa7.89□□□□□ -1.15
CKAP2-201ENST00000258607 RBMXL2O75526 392 aaKnown RBP7.89□□□□□ -1.15
CKAP2-201ENST00000258607 HIST1H1DP16402 221 aaKnown RBP7.89□□□□□ -1.15
CKAP2-201ENST00000258607 COMMD7Q86VX2 200 aa7.89□□□□□ -1.15
CKAP2-201ENST00000258607 TMEM123Q8N131 208 aa7.89□□□□□ -1.15
CKAP2-201ENST00000258607 GPX8Q8TED1 209 aa7.89□□□□□ -1.15
CKAP2-201ENST00000258607 TIMM10BQ9Y5J6 103 aa7.89□□□□□ -1.15
CKAP2-201ENST00000258607 MYO9AB2RTY4 2548 aa7.89□□□□□ -1.15
CKAP2-201ENST00000258607 MALRD1Q5VYJ5 2156 aa7.89□□□□□ -1.15
CKAP2-201ENST00000258607 IGHV3-43A0A0B4J1X8 118 aa7.89□□□□□ -1.15
CKAP2-201ENST00000258607 ZNF716A6NP11 495 aa7.89□□□□□ -1.15
CKAP2-201ENST00000258607 KLRC4-KLRK1H3BQV0 150 aa7.89□□□□□ -1.15
CKAP2-201ENST00000258607 IGHV3-43DP0DP04 118 aa7.89□□□□□ -1.15
CKAP2-201ENST00000258607 RCC1P18754 421 aaPredicted RBP7.89□□□□□ -1.15
CKAP2-201ENST00000258607 BCL3P20749 454 aa7.89□□□□□ -1.15
CKAP2-201ENST00000258607 HOXC12P31275 282 aa7.89□□□□□ -1.15
CKAP2-201ENST00000258607 FCGR2CP31995 323 aa7.89□□□□□ -1.15
CKAP2-201ENST00000258607 PTGS2P35354 604 aa7.89□□□□□ -1.15
CKAP2-201ENST00000258607 B3GALT5-AS1P59052 145 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms