RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 PNLDC1Q8NA58 520 aaKnown RBP12.79□□□□□ -0.36
TRAFD1-201ENST00000257604 OR10R2Q8NGX6 335 aa12.79□□□□□ -0.36
TRAFD1-201ENST00000257604 THRSPQ92748 146 aa12.79□□□□□ -0.36
TRAFD1-201ENST00000257604 RAB3CQ96E17 227 aa12.79□□□□□ -0.36
TRAFD1-201ENST00000257604 TAS2R8Q9NYW2 309 aa12.79□□□□□ -0.36
TRAFD1-201ENST00000257604 LIPGQ9Y5X9 500 aa12.79□□□□□ -0.36
TRAFD1-201ENST00000257604 F8W036 122 aa12.79□□□□□ -0.36
TRAFD1-201ENST00000257604 ETV2O00321 342 aaPredicted RBP12.79□□□□□ -0.36
TRAFD1-201ENST00000257604 ISG15P05161 165 aa12.79□□□□□ -0.36
TRAFD1-201ENST00000257604 BLOC1S1P78537 153 aa12.79□□□□□ -0.36
TRAFD1-201ENST00000257604 TAF9Q16594 264 aa12.79□□□□□ -0.36
TRAFD1-201ENST00000257604 PLEKHN1Q494U1 663 aaPredicted RBP12.79□□□□□ -0.36
TRAFD1-201ENST00000257604 SKA3Q8IX90 412 aa12.79□□□□□ -0.36
TRAFD1-201ENST00000257604 TMEM251Q8N6I4 163 aa12.79□□□□□ -0.36
TRAFD1-201ENST00000257604 TMED6Q8WW62 240 aa12.79□□□□□ -0.36
TRAFD1-201ENST00000257604 SLC7A10Q9NS82 523 aa12.79□□□□□ -0.36
TRAFD1-201ENST00000257604 SPTBN4Q9H254 2564 aa12.79□□□□□ -0.36
TRAFD1-201ENST00000257604 COL5A1P20908 1838 aaPredicted RBP12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 WIPF3A6NGB9 483 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 WISP2O76076 250 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 ACKR3P25106 362 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 MEOX1P50221 254 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 NPY4RP50391 375 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 ACTBP60709 375 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 GRB2P62993 217 aaKnown RBP12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 ACTG1P63261 375 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 TMEM17Q86X19 198 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 LDLRAD3Q86YD5 345 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 OR5AS1Q8N127 324 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 REEP6Q96HR9 211 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 HDHD3Q9BSH5 251 aaPredicted RBP12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 DNTTIP1Q9H147 329 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 B4GALT7Q9UBV7 327 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 RAB22AQ9UL26 194 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 KCNK7Q9Y2U2 307 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 A0A1B0GV50 99 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 UBBP0CG47 229 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 CSRP1P21291 193 aaKnown RBP12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 TAS2R19P59542 299 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 RPS27AP62979 156 aaKnown RBP12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 UBA52P62987 128 aaKnown RBP12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 FGL1Q08830 312 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 RSPO1Q2MKA7 263 aaPredicted RBP12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 PABPC1L2AQ5JQF8 200 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 DOK3Q7L591 496 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 ZNF100Q8IYN0 542 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 EIF4E3Q8N5X7 224 aaKnown RBP12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 NKAIN3Q8N8D7 197 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 HRH4Q9H3N8 390 aa12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 ZNF629Q9UEG4 869 aaPredicted RBP12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 PURGQ9UJV8 347 aaKnown RBP12.78□□□□□ -0.36
TRAFD1-201ENST00000257604 IGF2RP11717 2491 aa12.77□□□□□ -0.36
TRAFD1-201ENST00000257604 PVALBP20472 110 aaPredicted RBP12.77□□□□□ -0.36
TRAFD1-201ENST00000257604 ARF1P84077 181 aaKnown RBP12.77□□□□□ -0.36
TRAFD1-201ENST00000257604 PSG4Q00888 419 aa12.77□□□□□ -0.36
TRAFD1-201ENST00000257604 FOXO1Q12778 655 aa12.77□□□□□ -0.36
TRAFD1-201ENST00000257604 SNTB1Q13884 538 aaKnown RBP12.77□□□□□ -0.36
TRAFD1-201ENST00000257604 SPATA46Q5T0L3 261 aa12.77□□□□□ -0.36
TRAFD1-201ENST00000257604 ZNF600Q6ZNG1 722 aa12.77□□□□□ -0.36
TRAFD1-201ENST00000257604 C6orf201Q7Z4U5 140 aa12.77□□□□□ -0.36
TRAFD1-201ENST00000257604 C15orf40Q8WUR7 153 aa12.77□□□□□ -0.36
TRAFD1-201ENST00000257604 NABP1Q96AH0 204 aa12.77□□□□□ -0.36
TRAFD1-201ENST00000257604 SGK3Q96BR1 496 aa12.77□□□□□ -0.36
TRAFD1-201ENST00000257604 ESRP2Q9H6T0 727 aaKnown RBP12.77□□□□□ -0.36
TRAFD1-201ENST00000257604 SH2D2AQ9NP31 389 aa12.77□□□□□ -0.36
TRAFD1-201ENST00000257604 MBD2Q9UBB5 411 aa12.77□□□□□ -0.36
TRAFD1-201ENST00000257604 RNF222A6NCQ9 220 aa12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 ABCD4O14678 606 aa12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 SYNGR4O95473 234 aa12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 CSTBP04080 98 aaKnown RBP12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 ADCYAP1P18509 176 aa12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 ID4P47928 161 aa12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 POLR2GP62487 172 aaKnown RBP eCLIP12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 C11orf87Q6NUJ2 197 aa12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 MOB3CQ70IA8 216 aa12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 GPX8Q8TED1 209 aa12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 ZPBPQ9BS86 351 aa12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 PARD6AQ9NPB6 346 aa12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 MED19A0JLT2 244 aaPredicted RBP12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 C5orf49A4QMS7 147 aa12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 NR2C1P13056 603 aa12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 OPRM1P35372 400 aa12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 FLI1Q01543 452 aaPredicted RBP12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 ZNF239Q16600 458 aaKnown RBP12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 PLA2G2CQ5R387 149 aa12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 FAM166AQ6J272 317 aa12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 CCDC107Q8WV48 283 aa12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 FAM173AQ9BQD7 235 aa12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 OR10A2Q9H208 303 aa12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 PCDHGA1Q9Y5H4 931 aa12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 TNRC6BQ9UPQ9 1833 aaKnown RBP12.77□□□□□ -0.37
TRAFD1-201ENST00000257604 NPIPB13A6NJU9 1138 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 NPIPB4C9JG80 1138 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 NPBWR1P48145 328 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 TSC22D1Q15714 1073 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 DNM1P46Q6ZS02 220 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 SLC16A13Q7RTY0 426 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 ADAD2Q8NCV1 583 aaKnown RBP12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 VSIG4Q9Y279 399 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 A0A0A6YYD4 124 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms