RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 OR10AC1Q8NH08 325 aa16.64■□□□□ 0.25
SMARCC1-201ENST00000254480 PRR7Q8TB68 274 aa16.64■□□□□ 0.25
SMARCC1-201ENST00000254480 POM121L2Q96KW2 1035 aa16.64■□□□□ 0.25
SMARCC1-201ENST00000254480 TNFRSF1AP19438 455 aa16.64■□□□□ 0.25
SMARCC1-201ENST00000254480 PTGFRP43088 359 aa16.64■□□□□ 0.25
SMARCC1-201ENST00000254480 COL19A1Q14993 1142 aa16.64■□□□□ 0.25
SMARCC1-201ENST00000254480 TMEM229BQ8NBD8 167 aa16.64■□□□□ 0.25
SMARCC1-201ENST00000254480 PLEKHA2Q9HB19 425 aa16.64■□□□□ 0.25
SMARCC1-201ENST00000254480 LHX9Q9NQ69 397 aa16.64■□□□□ 0.25
SMARCC1-201ENST00000254480 TAAR3PQ9P1P4 343 aa16.64■□□□□ 0.25
SMARCC1-201ENST00000254480 ZNF320A2RRD8 509 aa16.64■□□□□ 0.25
SMARCC1-201ENST00000254480 SLC16A12Q6ZSM3 486 aa16.64■□□□□ 0.25
SMARCC1-201ENST00000254480 HES4Q9HCC6 221 aa16.64■□□□□ 0.25
SMARCC1-201ENST00000254480 SERPINE3A8MV23 424 aa16.64■□□□□ 0.25
SMARCC1-201ENST00000254480 MASP2O00187 686 aa16.64■□□□□ 0.25
SMARCC1-201ENST00000254480 HPP00738 406 aa16.64■□□□□ 0.25
SMARCC1-201ENST00000254480 CABLES2Q9BTV7 478 aa16.64■□□□□ 0.25
SMARCC1-201ENST00000254480 HSPB2A8KAH6 182 aa16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 TCAPO15273 167 aa16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 CD160O95971 181 aa16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 METTL15P1P0C7V9 234 aa16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 MAGEA5P43359 124 aa16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 MMP15P51511 669 aa16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 CD226Q15762 336 aa16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 HSPB2Q16082 182 aa16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 OR4D9Q8NGE8 314 aa16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 OR5H1A6NKK0 313 aa16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 PLPP3O14495 311 aa16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 HGDQ93099 445 aa16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 SPAARA0A1B0GVQ0 90 aa16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 TNFAIP6P98066 277 aaPredicted RBP16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 SPNS3Q6ZMD2 512 aa16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 CD96P40200 585 aa16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 TMEM128Q5BJH2 165 aa16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 KNTC1P50748 2209 aa16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 PNLIPP16233 465 aa16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 BLNKQ8WV28 456 aa16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 RPEQ96AT9 228 aa16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 CIB3Q96Q77 187 aaPredicted RBP16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 ZNF385DQ9H6B1 395 aa16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 CNTD2Q9H8S5 307 aa16.63■□□□□ 0.25
SMARCC1-201ENST00000254480 SULT1A3P0DMM9 295 aa16.62■□□□□ 0.25
SMARCC1-201ENST00000254480 SULT1A4P0DMN0 295 aa16.62■□□□□ 0.25
SMARCC1-201ENST00000254480 PPP1CBP62140 327 aa16.62■□□□□ 0.25
SMARCC1-201ENST00000254480 RNPS1Q15287 305 aaKnown RBP16.62■□□□□ 0.25
SMARCC1-201ENST00000254480 ZNF680Q8NEM1 530 aa16.62■□□□□ 0.25
SMARCC1-201ENST00000254480 SIRT3Q9NTG7 399 aaPredicted RBP16.62■□□□□ 0.25
SMARCC1-201ENST00000254480 DHRS3O75911 302 aa16.62■□□□□ 0.25
SMARCC1-201ENST00000254480 GOSR1O95249 250 aa16.62■□□□□ 0.25
SMARCC1-201ENST00000254480 FUT7Q11130 342 aa16.62■□□□□ 0.25
SMARCC1-201ENST00000254480 SLC36A1Q7Z2H8 476 aa16.62■□□□□ 0.25
SMARCC1-201ENST00000254480 OR8D4Q8NGM9 314 aa16.62■□□□□ 0.25
SMARCC1-201ENST00000254480 OR2D2Q9H210 308 aa16.62■□□□□ 0.25
SMARCC1-201ENST00000254480 NCR3LG1Q68D85 454 aa16.62■□□□□ 0.25
SMARCC1-201ENST00000254480 CRYBB2P43320 205 aa16.62■□□□□ 0.25
SMARCC1-201ENST00000254480 LPAR6P43657 344 aa16.62■□□□□ 0.25
SMARCC1-201ENST00000254480 MVDP53602 400 aa16.62■□□□□ 0.25
SMARCC1-201ENST00000254480 HFEQ30201 348 aa16.62■□□□□ 0.25
SMARCC1-201ENST00000254480 DHRS9Q9BPW9 319 aa16.62■□□□□ 0.25
SMARCC1-201ENST00000254480 TM4SF19Q96DZ7 209 aa16.62■□□□□ 0.25
SMARCC1-201ENST00000254480 C4orf45Q96LM5 186 aa16.62■□□□□ 0.25
SMARCC1-201ENST00000254480 TRIM77I1YAP6 450 aa16.61■□□□□ 0.25
SMARCC1-201ENST00000254480 SPINT1O43278 529 aa16.61■□□□□ 0.25
SMARCC1-201ENST00000254480 ERVFC1-1P60608 527 aa16.61■□□□□ 0.25
SMARCC1-201ENST00000254480 TRA2AQ13595 282 aaKnown RBP eCLIP16.61■□□□□ 0.252e-6■■□□□ 14.1
SMARCC1-201ENST00000254480 NXF2Q9GZY0 626 aaKnown RBP16.61■□□□□ 0.25
SMARCC1-201ENST00000254480 SNRPGP15A8MWD9 76 aa16.61■□□□□ 0.25
SMARCC1-201ENST00000254480 CALCRP30988 508 aa16.61■□□□□ 0.25
SMARCC1-201ENST00000254480 ENDOGQ14249 297 aaKnown RBP16.61■□□□□ 0.25
SMARCC1-201ENST00000254480 SSX1Q16384 188 aa16.61■□□□□ 0.25
SMARCC1-201ENST00000254480 COX14Q96I36 57 aa16.61■□□□□ 0.25
SMARCC1-201ENST00000254480 BTF3L4Q96K17 158 aa16.61■□□□□ 0.25
SMARCC1-201ENST00000254480 SLC26A1Q9H2B4 701 aa16.61■□□□□ 0.25
SMARCC1-201ENST00000254480 C12orf10Q9HB07 376 aa16.61■□□□□ 0.25
SMARCC1-201ENST00000254480 OR5V1Q9UGF6 321 aa16.61■□□□□ 0.25
SMARCC1-201ENST00000254480 TMIGD3P0DMS9 266 aaPredicted RBP16.61■□□□□ 0.25
SMARCC1-201ENST00000254480 ADAM10O14672 748 aa16.61■□□□□ 0.25
SMARCC1-201ENST00000254480 HIST1H1DP16402 221 aaKnown RBP16.61■□□□□ 0.25
SMARCC1-201ENST00000254480 TUSC5Q8IXB3 177 aa16.61■□□□□ 0.25
SMARCC1-201ENST00000254480 PAPPA2Q9BXP8 1791 aa16.61■□□□□ 0.25
SMARCC1-201ENST00000254480 APELAP0DMC3 54 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 PPP1R1AQ13522 171 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 NPEPL1Q8NDH3 523 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 ZMIZ1Q9ULJ6 1067 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 LAMP3Q9UQV4 416 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 MCM3APO60318 1980 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 ARID1AO14497 2285 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 PNLIPRP3Q17RR3 467 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 XAF1Q6GPH4 301 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 FAM219AQ8IW50 185 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 S100A4P26447 101 aaKnown RBP16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 NINQ8N4C6 2090 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 LIMS3P0CW19 117 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 LIMS4P0CW20 117 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 SLC25A1P53007 311 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 ST3GAL2Q16842 350 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 TIGD3Q6B0B8 471 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 GPR87Q9BY21 358 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 NAGKQ9UJ70 344 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms