RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 TMEM59Q9BXS4 323 aa8.86□□□□□ -0.99
COPB1-201ENST00000249923 PRO1933Q9H354 126 aa8.86□□□□□ -0.99
COPB1-201ENST00000249923 MCTS1Q9ULC4 181 aaKnown RBP8.86□□□□□ -0.99
COPB1-201ENST00000249923 OSGIN2Q9Y236 505 aa8.86□□□□□ -0.99
COPB1-201ENST00000249923 CEP250Q9BV73 2442 aa8.86□□□□□ -0.99
COPB1-201ENST00000249923 FAM221AA4D161 298 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 TOX3O15405 576 aaPredicted RBP8.85□□□□□ -0.99
COPB1-201ENST00000249923 FGF16O43320 207 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 C1QL1O75973 258 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 DIRAS3O95661 229 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 UMODP07911 640 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 FAM157CP0CG43 387 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 FAHP16930 419 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 S100A2P29034 98 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 F2RL1P55085 397 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 CLDN17P56750 224 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 SPEM2Q0P670 501 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 IL15RAQ13261 267 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 KISS1Q15726 138 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 SGCAQ16586 387 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 ZNF674Q2M3X9 581 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 Q6ZRG5 221 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 OR5T2Q8NGG2 359 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 OR4A4PQ8NGN8 299 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 CA5BP1Q8WTZ4 195 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 NTNG2Q96CW9 530 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 OXGR1Q96P68 337 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 HDHD3Q9BSH5 251 aaPredicted RBP8.85□□□□□ -0.99
COPB1-201ENST00000249923 MOB1AQ9H8S9 216 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 UQCC1Q9NVA1 299 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 ZFAND5O76080 213 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 CCL3P10147 92 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 GLRA1P23415 457 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 EPHA8P29322 1005 aaPredicted RBP8.85□□□□□ -0.99
COPB1-201ENST00000249923 DHPSP49366 369 aaPredicted RBP8.85□□□□□ -0.99
COPB1-201ENST00000249923 MST1LQ2TV78 715 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 SNAI3Q3KNW1 292 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 SP6Q3SY56 376 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 TMEM128Q5BJH2 165 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 OR5T1Q8NG75 326 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 AKR7LQ8NHP1 331 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 PLA2G2EQ9NZK7 142 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 ZNF44P15621 663 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 MSX1P28360 303 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 ZNF468Q5VIY5 522 aaPredicted RBP8.85□□□□□ -0.99
COPB1-201ENST00000249923 PPP1R3BQ86XI6 285 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 TMEM123Q8N131 208 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 LRRC18Q8N456 261 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 SPEM1Q8N4L4 309 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 ZIC4Q8N9L1 334 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 OR2AJ1Q8NGZ0 328 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 SAP25Q8TEE9 199 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 RHOVQ96L33 236 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 TMEM100Q9NV29 134 aa8.85□□□□□ -0.99
COPB1-201ENST00000249923 DSPP15924 2871 aaKnown RBP8.84□□□□□ -0.99
COPB1-201ENST00000249923 ZIC3O60481 467 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 YIF1AO95070 293 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 GSTP1P09211 210 aaKnown RBP8.84□□□□□ -0.99
COPB1-201ENST00000249923 MUC1P15941 1255 aaPredicted RBP8.84□□□□□ -0.99
COPB1-201ENST00000249923 PNLIPP16233 465 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 ZNF43P17038 809 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 ACKR3P25106 362 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 OTX1P32242 354 aaPredicted RBP8.84□□□□□ -0.99
COPB1-201ENST00000249923 RBMXP38159 391 aaKnown RBP8.84□□□□□ -0.99
COPB1-201ENST00000249923 RAB2AP61019 212 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 LRP11Q86VZ4 500 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 PHYHIPLQ96FC7 376 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 NMES1Q9C002 83 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 SLC26A1Q9H2B4 701 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 TAF9BQ9HBM6 251 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 SDHAF3Q9NRP4 125 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 EHFQ9NZC4 300 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 DHRS7CA6NNS2 312 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 CHRM2P08172 466 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 TBPP20226 339 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 GABRR1P24046 479 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 CTSSP25774 331 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 FHITP49789 147 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 B2MP61769 119 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 RAB32Q13637 225 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 IAH1Q2TAA2 248 aaPredicted RBP8.84□□□□□ -0.99
COPB1-201ENST00000249923 BRICD5Q6PL45 260 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 MEX3BQ6ZN04 569 aaKnown RBP8.84□□□□□ -0.99
COPB1-201ENST00000249923 Q6ZPA2 131 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 ZNF283Q8N7M2 679 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 OR5L2Q8NGL0 311 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 KCNG3Q8TAE7 436 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 NECAB3Q96P71 396 aaPredicted RBP8.84□□□□□ -0.99
COPB1-201ENST00000249923 RARRES3Q9UL19 164 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 RCL1Q9Y2P8 373 aaKnown RBP8.84□□□□□ -0.99
COPB1-201ENST00000249923 V9GYS6 101 aa8.84□□□□□ -0.99
COPB1-201ENST00000249923 IGKV1-27A0A075B6S5 117 aa8.84□□□□□ -1
COPB1-201ENST00000249923 A0A0G2JMM0 328 aa8.84□□□□□ -1
COPB1-201ENST00000249923 LOC102725191A0A1B0GVB3 256 aa8.84□□□□□ -1
COPB1-201ENST00000249923 A0A1W2PPB8 328 aa8.84□□□□□ -1
COPB1-201ENST00000249923 A0A1W2PPE2 198 aa8.84□□□□□ -1
COPB1-201ENST00000249923 A0A1W2PRS3 328 aa8.84□□□□□ -1
COPB1-201ENST00000249923 KIR3DP1A8MWS1 328 aa8.84□□□□□ -1
COPB1-201ENST00000249923 F5H5K5 113 aa8.84□□□□□ -1
COPB1-201ENST00000249923 RNASEK-C17orf49H0YIS7 233 aa8.84□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms