RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 TAF9Q16594 264 aa16.99■□□□□ 0.31
CDC42EP1-201ENST00000249014 ZNF528Q3MIS6 628 aa16.99■□□□□ 0.31
CDC42EP1-201ENST00000249014 FAM219AQ8IW50 185 aa16.99■□□□□ 0.31
CDC42EP1-201ENST00000249014 MRPS24Q96EL2 167 aaKnown RBP16.99■□□□□ 0.31
CDC42EP1-201ENST00000249014 OR10C1Q96KK4 312 aa16.99■□□□□ 0.31
CDC42EP1-201ENST00000249014 OR2H1Q9GZK4 316 aa16.99■□□□□ 0.31
CDC42EP1-201ENST00000249014 MS4A7Q9GZW8 240 aaPredicted RBP16.99■□□□□ 0.31
CDC42EP1-201ENST00000249014 METTL9Q9H1A3 318 aa16.99■□□□□ 0.31
CDC42EP1-201ENST00000249014 GPR35Q9HC97 309 aa16.99■□□□□ 0.31
CDC42EP1-201ENST00000249014 SIGLEC14Q08ET2 396 aa16.98■□□□□ 0.31
CDC42EP1-201ENST00000249014 SNTB1Q13884 538 aaKnown RBP16.98■□□□□ 0.31
CDC42EP1-201ENST00000249014 DBX2Q6ZNG2 339 aa16.98■□□□□ 0.31
CDC42EP1-201ENST00000249014 SKA3Q8IX90 412 aa16.98■□□□□ 0.31
CDC42EP1-201ENST00000249014 FAAP24Q9BTP7 215 aa16.98■□□□□ 0.31
CDC42EP1-201ENST00000249014 TIMM10BQ9Y5J6 103 aa16.98■□□□□ 0.31
CDC42EP1-201ENST00000249014 PPA1Q15181 289 aa16.98■□□□□ 0.31
CDC42EP1-201ENST00000249014 RSU1Q15404 277 aa16.98■□□□□ 0.31
CDC42EP1-201ENST00000249014 PAN3Q58A45 887 aaKnown RBP16.98■□□□□ 0.31
CDC42EP1-201ENST00000249014 RIPPLY2Q5TAB7 128 aa16.98■□□□□ 0.31
CDC42EP1-201ENST00000249014 PLXDC2Q6UX71 529 aa16.98■□□□□ 0.31
CDC42EP1-201ENST00000249014 DEFB123Q8N688 67 aa16.98■□□□□ 0.31
CDC42EP1-201ENST00000249014 PIK3IP1Q96FE7 263 aa16.98■□□□□ 0.31
CDC42EP1-201ENST00000249014 MRPS18CQ9Y3D5 142 aaKnown RBP16.98■□□□□ 0.31
CDC42EP1-201ENST00000249014 TEX13DA0A0J9YY54 714 aaPredicted RBP16.97■□□□□ 0.31
CDC42EP1-201ENST00000249014 CYTIPO60759 359 aa16.97■□□□□ 0.31
CDC42EP1-201ENST00000249014 KNG1P01042 644 aa16.97■□□□□ 0.31
CDC42EP1-201ENST00000249014 IGHV3-9P01782 118 aa16.97■□□□□ 0.31
CDC42EP1-201ENST00000249014 CSTBP04080 98 aaKnown RBP16.97■□□□□ 0.31
CDC42EP1-201ENST00000249014 PPIAP62937 165 aaKnown RBP16.97■□□□□ 0.31
CDC42EP1-201ENST00000249014 ZNF92Q03936 586 aa16.97■□□□□ 0.31
CDC42EP1-201ENST00000249014 CNN3Q15417 329 aaKnown RBP16.97■□□□□ 0.31
CDC42EP1-201ENST00000249014 TMEM42Q69YG0 159 aa16.97■□□□□ 0.31
CDC42EP1-201ENST00000249014 ELP2Q6IA86 826 aa16.97■□□□□ 0.31
CDC42EP1-201ENST00000249014 RTL6Q6ICC9 239 aa16.97■□□□□ 0.31
CDC42EP1-201ENST00000249014 THOC3Q96J01 351 aaKnown RBP16.97■□□□□ 0.31
CDC42EP1-201ENST00000249014 SPRY4Q9C004 299 aa16.97■□□□□ 0.31
CDC42EP1-201ENST00000249014 OR5AC2Q9NZP5 309 aa16.97■□□□□ 0.31
CDC42EP1-201ENST00000249014 CELSR3Q9NYQ7 3312 aa16.97■□□□□ 0.31
CDC42EP1-201ENST00000249014 IGKV1-12A0A0C4DH73 117 aa16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 NRASP01111 189 aa16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 IGKV1D-12P01611 117 aa16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 CNR1P21554 472 aa16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 PTGER4P35408 488 aa16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 RBP2P50120 134 aa16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 RRADP55042 308 aa16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 FAM3AP98173 230 aa16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 NSUN5P2Q63ZY6 315 aa16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 NAXEQ8NCW5 288 aa16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 TAAR9Q96RI9 348 aa16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 ZNF2Q9BSG1 426 aaPredicted RBP16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 METTL8Q9H825 291 aaKnown RBP16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 RYDENQ9NUL5 291 aaKnown RBP16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 LRFN1Q9P244 771 aa16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 AK3Q9UIJ7 227 aa16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 hCG_38984A0A1B0GV85 526 aa16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 MSGN1A6NI15 193 aa16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 C9orf172C9J069 976 aa16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 F8VVB4 439 aa16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 F8VWA3 439 aa16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 PRKACBP22694 351 aa16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 RFC3P40938 356 aa16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 SURF2Q15527 256 aaPredicted RBP16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 CPNE4Q96A23 557 aaPredicted RBP16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 BORCS8Q96FH0 119 aa16.96■□□□□ 0.31
CDC42EP1-201ENST00000249014 RRP8O43159 456 aaKnown RBP16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 BTN1A1Q13410 526 aa16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 ASCL4Q6XD76 172 aa16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 DNTTIP1Q9H147 329 aa16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 ARRDC1-AS1Q9H2J1 176 aa16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 LIME1Q9H400 295 aa16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 FOXJ2Q9P0K8 574 aa16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 ANXA10Q9UJ72 324 aa16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 FREM1Q5H8C1 2179 aa16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 A0A1W2PNU3 283 aaPredicted RBP16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 TERTO14746 1132 aaKnown RBP16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 NEURL1O76050 574 aa16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 MMP7P09237 267 aaPredicted RBP16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 JMJD7P0C870 316 aa16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 LYL1P12980 280 aa16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 MPLP40238 635 aa16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 LHFPL2Q6ZUX7 228 aa16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 POC1AQ8NBT0 407 aa16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 OR51F2Q8NH61 342 aa16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 STOML3Q8TAV4 291 aa16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 DYRK2Q92630 601 aa16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 SIGLEC12Q96PQ1 595 aa16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 SULT4A1Q9BR01 284 aa16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 ZPBPQ9BS86 351 aa16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 FAM117AQ9C073 453 aa16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 CYTL1Q9NRR1 136 aa16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 HSF4Q9ULV5 492 aa16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 C14orf166Q9Y224 244 aaKnown RBP16.95■□□□□ 0.3
CDC42EP1-201ENST00000249014 A0A1B0GW55 424 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 ZNF587BE7ETH6 402 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 HOXB5P09067 269 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 CELA3AP09093 270 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 DUX4L2P0CJ85 424 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 DUX4L3P0CJ86 424 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 DUX4L4P0CJ87 422 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 DUX4L5P0CJ88 424 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms