RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 Q6ZRG5 221 aa11.04□□□□□ -0.64
RAB3IP-201ENST00000247833 PP6455Q8WZ26 134 aa11.04□□□□□ -0.64
RAB3IP-201ENST00000247833 C20orf24Q9BUV8 137 aa11.04□□□□□ -0.64
RAB3IP-201ENST00000247833 TLNRD1Q9H1K6 362 aa11.04□□□□□ -0.64
RAB3IP-201ENST00000247833 PARPBPQ9NWS1 579 aa11.04□□□□□ -0.64
RAB3IP-201ENST00000247833 ZNF581Q9P0T4 197 aa11.04□□□□□ -0.64
RAB3IP-201ENST00000247833 SERPINE3A8MV23 424 aa11.04□□□□□ -0.64
RAB3IP-201ENST00000247833 PTGER4P35408 488 aa11.04□□□□□ -0.64
RAB3IP-201ENST00000247833 WIPI1Q5MNZ9 446 aaPredicted RBP11.04□□□□□ -0.64
RAB3IP-201ENST00000247833 SULT4A1Q9BR01 284 aa11.04□□□□□ -0.64
RAB3IP-201ENST00000247833 RTBDNQ9BSG5 229 aaPredicted RBP11.04□□□□□ -0.64
RAB3IP-201ENST00000247833 GVINP1Q7Z2Y8 2422 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 ZNF407Q9C0G0 2248 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 ARPC4-TTLL3A0A0A6YYG9 625 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 DNASE2O00115 360 aaPredicted RBP11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 BET1O15155 118 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 TSPAN15O95858 294 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 ICAM2P13598 275 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 RBP2P50120 134 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 CAV2P51636 162 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 CEACAM16Q2WEN9 425 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 ZNF468Q5VIY5 522 aaPredicted RBP11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 GGNBP1Q5YKI7 109 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 RNASE11Q8TAA1 199 aaKnown RBP11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 CEP250Q9BV73 2442 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 CCDC187A0A096LP49 1063 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 A0A096LPE4 126 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 A0A1W2PPZ6 126 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 GEMIN2O14893 280 aaKnown RBP11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 TOX3O15405 576 aaPredicted RBP11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 PHF1O43189 567 aaPredicted RBP11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 VAMP5O95183 116 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 SNAPINO95295 136 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 NFYBP25208 207 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 DSCR4P56555 118 aaPredicted RBP11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 SUPT4H1P63272 117 aaKnown RBP11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 ENDOGQ14249 297 aaKnown RBP11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 ARL6IP1Q15041 203 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 LYPD6Q86Y78 171 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 ESX1Q8N693 406 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 CD300LFQ8TDQ1 290 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 RTN4IP1Q8WWV3 396 aaPredicted RBP11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 HAS2Q92819 552 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 FBXO17Q96EF6 278 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 C1orf147Q96MC9 270 aaPredicted RBP11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 CHST5Q9GZS9 411 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 PNRC2Q9NPJ4 139 aaKnown RBP11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 FBXL17Q9UF56 701 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 ST3GAL6Q9Y274 331 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 EML6Q6ZMW3 1958 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 CACNA1DQ01668 2161 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 NRASP01111 189 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 CAMLGP49069 296 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 LSM6P62312 80 aaKnown RBP11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 CNN3Q15417 329 aaKnown RBP11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 FBXW12Q6X9E4 464 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 SGK3Q96BR1 496 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 OCSTAMPQ9BR26 566 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 SLC26A1Q9H2B4 701 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 AK3Q9UIJ7 227 aa11.03□□□□□ -0.64
RAB3IP-201ENST00000247833 C10orf142B7Z368 130 aa11.02□□□□□ -0.64
RAB3IP-201ENST00000247833 TRIM77I1YAP6 450 aa11.02□□□□□ -0.64
RAB3IP-201ENST00000247833 OR5AC1P0C628 307 aa11.02□□□□□ -0.64
RAB3IP-201ENST00000247833 CCL2P13500 99 aa11.02□□□□□ -0.64
RAB3IP-201ENST00000247833 ACKR3P25106 362 aa11.02□□□□□ -0.64
RAB3IP-201ENST00000247833 PDZK1IP1Q13113 114 aa11.02□□□□□ -0.64
RAB3IP-201ENST00000247833 CLINT1Q14677 625 aa11.02□□□□□ -0.64
RAB3IP-201ENST00000247833 PCOLCEQ15113 449 aa11.02□□□□□ -0.64
RAB3IP-201ENST00000247833 PAPOLGQ9BWT3 736 aaKnown RBP11.02□□□□□ -0.64
RAB3IP-201ENST00000247833 RPS10P5Q9NQ39 176 aa11.02□□□□□ -0.64
RAB3IP-201ENST00000247833 FBXO9Q9UK97 447 aaPredicted RBP11.02□□□□□ -0.64
RAB3IP-201ENST00000247833 CNOT1A5YKK6 2376 aaKnown RBP11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 SNRNP70P08621 437 aaKnown RBP11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 LIFP15018 202 aa11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 CTRB1P17538 263 aa11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 TCN2P20062 427 aa11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 DUSP1P28562 367 aa11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 AADACL3Q5VUY0 350 aa11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 CTRB2Q6GPI1 263 aa11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 LDLRAD3Q86YD5 345 aa11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 MAFAQ8NHW3 353 aaPredicted RBP11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 SECTM1Q8WVN6 248 aa11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 FRYLO94915 3013 aa11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 EP300Q09472 2414 aaPredicted RBP11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 NPBWR1P48145 328 aa11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 TMEM33P57088 247 aa11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 PJVKQ0ZLH3 352 aa11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 SRXN1Q9BYN0 137 aa11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 ZNF700Q9H0M5 742 aa11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 UQCC1Q9NVA1 299 aa11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 WNT16Q9UBV4 365 aa11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 LPAR3Q9UBY5 353 aa11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 ANXA10Q9UJ72 324 aa11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 UBE2J1Q9Y385 318 aaPredicted RBP11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 HS3ST3B1Q9Y662 390 aa11.02□□□□□ -0.65
RAB3IP-201ENST00000247833 RAB19A4D1S5 217 aa11.01□□□□□ -0.65
RAB3IP-201ENST00000247833 ZNF133P52736 654 aaPredicted RBP11.01□□□□□ -0.65
RAB3IP-201ENST00000247833 MALLQ13021 153 aa11.01□□□□□ -0.65
RAB3IP-201ENST00000247833 PPA1Q15181 289 aa11.01□□□□□ -0.65
RAB3IP-201ENST00000247833 EXT1Q16394 746 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms