RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 WWTR1Q9GZV5 400 aa18.02■□□□□ 0.48
SNX3-201ENST00000230085 PTGES2Q9H7Z7 377 aa18.02■□□□□ 0.48
SNX3-201ENST00000230085 DECR2Q9NUI1 292 aa18.02■□□□□ 0.48
SNX3-201ENST00000230085 TUBD1Q9UJT1 453 aa18.02■□□□□ 0.48
SNX3-201ENST00000230085 MED13Q9UHV7 2174 aa18.02■□□□□ 0.48
SNX3-201ENST00000230085 EXPH5Q8NEV8 1989 aa18.02■□□□□ 0.47
SNX3-201ENST00000230085 IGHV1-45A0A0A0MS14 117 aa18.02■□□□□ 0.47
SNX3-201ENST00000230085 NPIPA5E9PKD4 350 aa18.02■□□□□ 0.47
SNX3-201ENST00000230085 CDC14BO60729 498 aa18.02■□□□□ 0.47
SNX3-201ENST00000230085 COX6A1P12074 109 aa18.02■□□□□ 0.47
SNX3-201ENST00000230085 MAS1LP35410 378 aa18.02■□□□□ 0.47
SNX3-201ENST00000230085 UCNP55089 124 aa18.02■□□□□ 0.47
SNX3-201ENST00000230085 PLCXD2Q0VAA5 305 aa18.02■□□□□ 0.47
SNX3-201ENST00000230085 UBAC2Q8NBM4 344 aa18.02■□□□□ 0.47
SNX3-201ENST00000230085 OR5H2Q8NGV7 314 aa18.02■□□□□ 0.47
SNX3-201ENST00000230085 KIRREL1Q96J84 757 aa18.02■□□□□ 0.47
SNX3-201ENST00000230085 OR10C1Q96KK4 312 aa18.02■□□□□ 0.47
SNX3-201ENST00000230085 WDR77Q9BQA1 342 aaPredicted RBP18.02■□□□□ 0.47
SNX3-201ENST00000230085 HRH4Q9H3N8 390 aa18.02■□□□□ 0.47
SNX3-201ENST00000230085 C19orf25Q9UFG5 118 aaPredicted RBP18.02■□□□□ 0.47
SNX3-201ENST00000230085 NPIPA1Q9UND3 350 aa18.02■□□□□ 0.47
SNX3-201ENST00000230085 F12P00748 615 aaPredicted RBP18.01■□□□□ 0.47
SNX3-201ENST00000230085 NFYBP25208 207 aa18.01■□□□□ 0.47
SNX3-201ENST00000230085 SUCLG1P53597 346 aaKnown RBP18.01■□□□□ 0.47
SNX3-201ENST00000230085 TMEM50BP56557 158 aa18.01■□□□□ 0.47
SNX3-201ENST00000230085 RAB32Q13637 225 aa18.01■□□□□ 0.47
SNX3-201ENST00000230085 PCOLCEQ15113 449 aa18.01■□□□□ 0.47
SNX3-201ENST00000230085 ADPRHL1Q8NDY3 354 aa18.01■□□□□ 0.47
SNX3-201ENST00000230085 OR13G1Q8NGZ3 307 aa18.01■□□□□ 0.47
SNX3-201ENST00000230085 DAZLQ92904 295 aaKnown RBP18.01■□□□□ 0.47
SNX3-201ENST00000230085 WNT2BQ93097 391 aa18.01■□□□□ 0.47
SNX3-201ENST00000230085 HIST1H2BAQ96A08 127 aa18.01■□□□□ 0.47
SNX3-201ENST00000230085 URM1Q9BTM9 101 aaKnown RBP18.01■□□□□ 0.47
SNX3-201ENST00000230085 MRPS28Q9Y2Q9 187 aaKnown RBP18.01■□□□□ 0.47
SNX3-201ENST00000230085 FAM96BQ9Y3D0 163 aa18.01■□□□□ 0.47
SNX3-201ENST00000230085 ALPK2Q86TB3 2170 aa18.01■□□□□ 0.47
SNX3-201ENST00000230085 KCNAB3O43448 404 aa18■□□□□ 0.47
SNX3-201ENST00000230085 PRKNO60260 465 aaPredicted RBP18■□□□□ 0.47
SNX3-201ENST00000230085 ADAP1O75689 374 aa18■□□□□ 0.47
SNX3-201ENST00000230085 WISP1O95388 367 aa18■□□□□ 0.47
SNX3-201ENST00000230085 LMO1P25800 156 aa18■□□□□ 0.47
SNX3-201ENST00000230085 GNALP38405 381 aa18■□□□□ 0.47
SNX3-201ENST00000230085 P2RY4P51582 365 aa18■□□□□ 0.47
SNX3-201ENST00000230085 HYAL4Q2M3T9 481 aa18■□□□□ 0.47
SNX3-201ENST00000230085 FAM76BQ5HYJ3 339 aa18■□□□□ 0.47
SNX3-201ENST00000230085 HLA-DQA1Q5Y7H0 255 aa18■□□□□ 0.47
SNX3-201ENST00000230085 DHRS11Q6UWP2 260 aa18■□□□□ 0.47
SNX3-201ENST00000230085 OR10S1Q8NGN2 331 aa18■□□□□ 0.47
SNX3-201ENST00000230085 IP6K3Q96PC2 410 aa18■□□□□ 0.47
SNX3-201ENST00000230085 TMEM59Q9BXS4 323 aa18■□□□□ 0.47
SNX3-201ENST00000230085 ZNF700Q9H0M5 742 aa18■□□□□ 0.47
SNX3-201ENST00000230085 TMEM231Q9H6L2 316 aa18■□□□□ 0.47
SNX3-201ENST00000230085 CHST11Q9NPF2 352 aa18■□□□□ 0.47
SNX3-201ENST00000230085 B3GALT5Q9Y2C3 310 aa18■□□□□ 0.47
SNX3-201ENST00000230085 PCNX3Q9H6A9 2034 aa18■□□□□ 0.47
SNX3-201ENST00000230085 ANKUB1A6NFN9 424 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 MED6O75586 246 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 NUDT14O95848 222 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 HLA-DOBP13765 273 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 APOBEC1P41238 236 aaKnown RBP17.99■□□□□ 0.47
SNX3-201ENST00000230085 HSF1Q00613 529 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 DEFB109BQ30KR1 87 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 GLIPR1L1Q6UWM5 242 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 LINC00346Q8IVM7 164 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 OR1N1Q8NGS0 311 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 OR13C9Q8NGT0 318 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 C11orf40Q8WZ69 217 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 SULT4A1Q9BR01 284 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 NICN1Q9BSH3 213 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 SCRT1Q9BWW7 348 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 MRPL13Q9BYD1 178 aaKnown RBP17.99■□□□□ 0.47
SNX3-201ENST00000230085 PLEKHA2Q9HB19 425 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 ZNF160Q9HCG1 818 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 ATMQ13315 3056 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 PHF3Q92576 2039 aaKnown RBP17.99■□□□□ 0.47
SNX3-201ENST00000230085 NSG1A0A0A6YYJ2 146 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 A0A1B0GW64 132 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 S100A9P06702 114 aaKnown RBP17.99■□□□□ 0.47
SNX3-201ENST00000230085 ZNF708P17019 499 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 ZNF20P17024 532 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 FMODQ06828 376 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 KCNMB1Q16558 191 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 RPL7L1Q6DKI1 246 aaKnown RBP17.99■□□□□ 0.47
SNX3-201ENST00000230085 PRR22Q8IZ63 422 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 OR10H5Q8NGA6 315 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 ROBO4Q8WZ75 1007 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 C1orf123Q9NWV4 160 aa17.99■□□□□ 0.47
SNX3-201ENST00000230085 ARGFXA6NJG6 315 aa17.98■□□□□ 0.47
SNX3-201ENST00000230085 ZNF878C9JN71 531 aa17.98■□□□□ 0.47
SNX3-201ENST00000230085 FARS2O95363 451 aaKnown RBP17.98■□□□□ 0.47
SNX3-201ENST00000230085 IGHV2-5P01817 119 aa17.98■□□□□ 0.47
SNX3-201ENST00000230085 PRF1P14222 555 aa17.98■□□□□ 0.47
SNX3-201ENST00000230085 THBS4P35443 961 aa17.98■□□□□ 0.47
SNX3-201ENST00000230085 NPY4RP50391 375 aa17.98■□□□□ 0.47
SNX3-201ENST00000230085 CHAF1BQ13112 559 aa17.98■□□□□ 0.47
SNX3-201ENST00000230085 DCAF10Q5QP82 559 aa17.98■□□□□ 0.47
SNX3-201ENST00000230085 THEM4Q5T1C6 240 aa17.98■□□□□ 0.47
SNX3-201ENST00000230085 POMZP3Q6PJE2 187 aa17.98■□□□□ 0.47
SNX3-201ENST00000230085 SLC29A4Q7RTT9 530 aa17.98■□□□□ 0.47
SNX3-201ENST00000230085 ZNF101Q8IZC7 436 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms