RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 POM121L2Q96KW2 1035 aa16.36■□□□□ 0.21
CLIP2-201ENST00000223398 SAP30LQ9HAJ7 183 aa16.36■□□□□ 0.21
CLIP2-201ENST00000223398 SCN3AQ9NY46 2000 aa16.36■□□□□ 0.21
CLIP2-201ENST00000223398 A0A0A6YYJ9 748 aa16.36■□□□□ 0.21
CLIP2-201ENST00000223398 ZNF724A8MTY0 619 aa16.36■□□□□ 0.21
CLIP2-201ENST00000223398 TOX4O94842 621 aa16.36■□□□□ 0.21
CLIP2-201ENST00000223398 DHODHQ02127 395 aa16.36■□□□□ 0.21
CLIP2-201ENST00000223398 HAGHQ16775 308 aa16.36■□□□□ 0.21
CLIP2-201ENST00000223398 ZNF439Q8NDP4 499 aa16.36■□□□□ 0.21
CLIP2-201ENST00000223398 DYNC2LI1Q8TCX1 351 aa16.36■□□□□ 0.21
CLIP2-201ENST00000223398 GOSR1O95249 250 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 MPPED2Q15777 294 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 DBX2Q6ZNG2 339 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 MISP3Q96FF7 219 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 SH2D7A6NKC9 451 aaPredicted RBP16.35■□□□□ 0.21
CLIP2-201ENST00000223398 GPR31O00270 319 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 SFTPCP11686 197 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 RPL12P30050 165 aaKnown RBP16.35■□□□□ 0.21
CLIP2-201ENST00000223398 BTG1P62324 171 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 FOXO1Q12778 655 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 MESTQ5EB52 335 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 RNF165Q6ZSG1 346 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 NPEPL1Q8NDH3 523 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 OR8D4Q8NGM9 314 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 OPN1MWP04001 364 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 OPN1MW2P0DN77 364 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 OPN1MW3P0DN78 364 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 PNLIPRP3Q17RR3 467 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 TOR2AQ5JU69 321 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 ATP1A1-AS1Q5TC04 95 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 SLC38A6Q8IZM9 456 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 ZNF441Q8N8Z8 693 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 ZNF721Q8TF20 911 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 APH1BQ8WW43 257 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 C12orf10Q9HB07 376 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 ASXL3Q9C0F0 2248 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 C16orf97H3BN30 126 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 COX7A2P2O60397 106 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 CALCRP30988 508 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 TMPRSS3P57727 454 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 TAS2R45P59539 299 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 BPIFB3P59826 476 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 CDH26Q8IXH8 852 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 OR8B12Q8NGG6 310 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 SAP25Q8TEE9 199 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 SOX7Q9BT81 388 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 TMEM272A0A1B0GTI8 110 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 TXNL1O43396 289 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 SOX15O60248 233 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 PSMB6P28072 239 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 ASAH1Q13510 395 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 SNTB1Q13884 538 aaKnown RBP16.35■□□□□ 0.21
CLIP2-201ENST00000223398 DGAT2L6Q6ZPD8 337 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 GAL3ST2Q9H3Q3 398 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 TRAPPC4Q9Y296 219 aa16.35■□□□□ 0.21
CLIP2-201ENST00000223398 SCN4AP35499 1836 aa16.34■□□□□ 0.21
CLIP2-201ENST00000223398 hADV38S2A0JD32 116 aa16.34■□□□□ 0.21
CLIP2-201ENST00000223398 C1QAP02745 245 aa16.34■□□□□ 0.21
CLIP2-201ENST00000223398 NDUFA6P56556 154 aa16.34■□□□□ 0.21
CLIP2-201ENST00000223398 TAGLNQ01995 201 aaKnown RBP16.34■□□□□ 0.21
CLIP2-201ENST00000223398 BTN1A1Q13410 526 aa16.34■□□□□ 0.21
CLIP2-201ENST00000223398 ATPIF1Q9UII2 106 aa16.34■□□□□ 0.21
CLIP2-201ENST00000223398 LAMP3Q9UQV4 416 aa16.34■□□□□ 0.21
CLIP2-201ENST00000223398 URGCP-MRPS24S4R325 110 aa16.34■□□□□ 0.21
CLIP2-201ENST00000223398 LY75O60449 1722 aa16.34■□□□□ 0.21
CLIP2-201ENST00000223398 EXOSC2Q13868 293 aaKnown RBP16.34■□□□□ 0.21
CLIP2-201ENST00000223398 LRRTM1Q86UE6 522 aa16.34■□□□□ 0.21
CLIP2-201ENST00000223398 OR4D11Q8NGI4 311 aa16.34■□□□□ 0.21
CLIP2-201ENST00000223398 SF3B5Q9BWJ5 86 aaKnown RBP16.34■□□□□ 0.21
CLIP2-201ENST00000223398 ST8SIA5O15466 376 aa16.34■□□□□ 0.21
CLIP2-201ENST00000223398 PAX6P26367 422 aa16.34■□□□□ 0.21
CLIP2-201ENST00000223398 TAGLN2P37802 199 aaKnown RBP16.34■□□□□ 0.21
CLIP2-201ENST00000223398 OR3A1P47881 315 aa16.34■□□□□ 0.21
CLIP2-201ENST00000223398 OR2T6Q8NHC8 308 aa16.34■□□□□ 0.21
CLIP2-201ENST00000223398 TMED6Q8WW62 240 aa16.34■□□□□ 0.21
CLIP2-201ENST00000223398 CIB3Q96Q77 187 aaPredicted RBP16.34■□□□□ 0.21
CLIP2-201ENST00000223398 IL5P05113 134 aa16.34■□□□□ 0.21
CLIP2-201ENST00000223398 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.34■□□□□ 0.21
CLIP2-201ENST00000223398 OR4F5Q8NH21 305 aa16.34■□□□□ 0.21
CLIP2-201ENST00000223398 FAM122AQ96E09 287 aa16.34■□□□□ 0.21
CLIP2-201ENST00000223398 OR4F4Q96R69 305 aa16.34■□□□□ 0.21
CLIP2-201ENST00000223398 NPAP1Q9NZP6 1156 aa16.34■□□□□ 0.21
CLIP2-201ENST00000223398 RCL1Q9Y2P8 373 aaKnown RBP16.34■□□□□ 0.21
CLIP2-201ENST00000223398 OR5H14A6NHG9 310 aa16.33■□□□□ 0.21
CLIP2-201ENST00000223398 ZNF785A8K8V0 405 aa16.33■□□□□ 0.21
CLIP2-201ENST00000223398 SPINK9Q5DT21 86 aa16.33■□□□□ 0.21
CLIP2-201ENST00000223398 GABRB1P18505 474 aa16.33■□□□□ 0.2
CLIP2-201ENST00000223398 GPR35Q9HC97 309 aa16.33■□□□□ 0.2
CLIP2-201ENST00000223398 TIMM9Q9Y5J7 89 aa16.33■□□□□ 0.2
CLIP2-201ENST00000223398 CDIPTO14735 213 aa16.33■□□□□ 0.2
CLIP2-201ENST00000223398 ZNF354AO60765 605 aaPredicted RBP16.33■□□□□ 0.2
CLIP2-201ENST00000223398 CMTM3Q96MX0 182 aa16.33■□□□□ 0.2
CLIP2-201ENST00000223398 ZNF275Q9NSD4 429 aaPredicted RBP16.33■□□□□ 0.2
CLIP2-201ENST00000223398 CYC1P08574 325 aa16.33■□□□□ 0.2
CLIP2-201ENST00000223398 LYG2Q86SG7 212 aa16.33■□□□□ 0.2
CLIP2-201ENST00000223398 C17orf47Q8NEP4 570 aa16.33■□□□□ 0.2
CLIP2-201ENST00000223398 OR8B3Q8NGG8 313 aa16.33■□□□□ 0.2
CLIP2-201ENST00000223398 OR8B2Q96RD0 313 aa16.33■□□□□ 0.2
CLIP2-201ENST00000223398 ZNHIT1O43257 154 aa16.32■□□□□ 0.2
CLIP2-201ENST00000223398 PDGFAP04085 211 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms