RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 PELI1Q96FA3 418 aa12.35□□□□□ -0.43
SIPA1L3-201ENST00000222345 LTB4R2Q9NPC1 389 aa12.35□□□□□ -0.43
SIPA1L3-201ENST00000222345 FBXO4Q9UKT5 387 aa12.35□□□□□ -0.43
SIPA1L3-201ENST00000222345 AMDHD2Q9Y303 409 aa12.35□□□□□ -0.43
SIPA1L3-201ENST00000222345 A0A1W2PN81 502 aa12.35□□□□□ -0.43
SIPA1L3-201ENST00000222345 CDK2AP1O14519 115 aa12.35□□□□□ -0.43
SIPA1L3-201ENST00000222345 MT-ND6P03923 174 aa12.35□□□□□ -0.43
SIPA1L3-201ENST00000222345 MDH2P40926 338 aaKnown RBP12.35□□□□□ -0.43
SIPA1L3-201ENST00000222345 NKAIN2Q5VXU1 208 aa12.35□□□□□ -0.43
SIPA1L3-201ENST00000222345 NHLRC1Q6VVB1 395 aa12.35□□□□□ -0.43
SIPA1L3-201ENST00000222345 KCPQ6ZWJ8 1503 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 NDUFS8O00217 210 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 SELENOPP49908 381 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 HES4Q9HCC6 221 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 DOCK9Q9BZ29 2069 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 SP1P08047 785 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 ABOP16442 354 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 GUCA2AQ02747 115 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 RPL18Q07020 188 aaKnown RBP12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 PARS2Q7L3T8 475 aaKnown RBP12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 V9GYH0 126 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 IGSF23A1L1A6 192 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 SLC25A5P05141 298 aaKnown RBP12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 GNB1P62873 340 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 FAM26DQ5JW98 314 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 TAS1R1Q7RTX1 841 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 SLC35E3Q7Z769 313 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 TBX21Q9UL17 535 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 SCN1AP35498 2009 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 PTGESO14684 152 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 CER1O95813 267 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 GRPP07492 148 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 ZBTB25P24278 435 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 NR0B2Q15466 257 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 PLPPR5Q32ZL2 321 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 CD300LDQ6UXZ3 194 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 OR4F17Q8NGA8 305 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 A0A1B0GV90 55 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 CRHP06850 196 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 HIST1H1DP16402 221 aaKnown RBP12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 PNLIPRP2P54317 469 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 JMJD6Q6NYC1 403 aaPredicted RBP12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 EID2BQ96D98 161 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 TMEM56Q96MV1 263 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 ST6GAL1P15907 406 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 LIM2P55344 173 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 RPS23P62266 143 aaKnown RBP12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 MRPS24Q96EL2 167 aaKnown RBP12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 HHIPQ96QV1 700 aa12.34□□□□□ -0.43
SIPA1L3-201ENST00000222345 ATF1P18846 271 aa12.33□□□□□ -0.43
SIPA1L3-201ENST00000222345 SLC6A12P48065 614 aa12.33□□□□□ -0.43
SIPA1L3-201ENST00000222345 D2HGDHQ8N465 521 aa12.33□□□□□ -0.43
SIPA1L3-201ENST00000222345 MBD3L1Q8WWY6 194 aa12.33□□□□□ -0.43
SIPA1L3-201ENST00000222345 PLEKHB1Q9UF11 243 aaPredicted RBP12.33□□□□□ -0.43
SIPA1L3-201ENST00000222345 C3orf85A0A1B0GTC6 90 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 MFSD2BA6NFX1 497 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 HPXP02790 462 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 DYNLT3P51808 116 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 SLC37A1P57057 533 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 PPP2CAP67775 309 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 TMEM207Q6UWW9 146 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 SIRT6Q8N6T7 355 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 OR11H7Q8NGC8 314 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 OR1L1Q8NH94 360 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 RPS4Y2Q8TD47 263 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 KIF26BQ2KJY2 2108 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 IQCF3P0C7M6 154 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 CEBPDP49716 269 aaPredicted RBP12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 ASCL1P50553 236 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 AGFG1P52594 562 aaKnown RBP12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 PIAS3Q9Y6X2 628 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 SEC11BP0C7V7 166 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 FAM27D1Q5T7N8 215 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 TRAT1Q6PIZ9 186 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 SMCHD1A6NHR9 2005 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 MYO16Q9Y6X6 1858 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 SLC25A42Q86VD7 318 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 MS4A3Q96HJ5 214 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 RBM14Q96PK6 669 aaKnown RBP12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 MSL2Q9HCI7 577 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 OR6C3Q9NZP0 311 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 H3BP45 60 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 MLF2Q15773 248 aaPredicted RBP12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 SMIM21Q3B7S5 101 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 ASTLQ6HA08 431 aaPredicted RBP12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 TCEAL8Q8IYN2 117 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 H1FXQ92522 213 aaKnown RBP12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 SLCO1C1Q9NYB5 712 aa12.33□□□□□ -0.44
SIPA1L3-201ENST00000222345 RAB29O14966 203 aa12.32□□□□□ -0.44
SIPA1L3-201ENST00000222345 COX6CP09669 75 aa12.32□□□□□ -0.44
SIPA1L3-201ENST00000222345 AESQ08117 197 aa12.32□□□□□ -0.44
SIPA1L3-201ENST00000222345 SMAD2Q15796 467 aaKnown RBP12.32□□□□□ -0.44
SIPA1L3-201ENST00000222345 DOCK11Q5JSL3 2073 aa12.32□□□□□ -0.44
SIPA1L3-201ENST00000222345 ONECUT2O95948 504 aa12.32□□□□□ -0.44
SIPA1L3-201ENST00000222345 FUT3P21217 361 aa12.32□□□□□ -0.44
SIPA1L3-201ENST00000222345 CCR2P41597 374 aa12.32□□□□□ -0.44
SIPA1L3-201ENST00000222345 CLDN2P57739 230 aa12.32□□□□□ -0.44
SIPA1L3-201ENST00000222345 LSM11P83369 360 aaKnown RBP eCLIP12.32□□□□□ -0.44
SIPA1L3-201ENST00000222345 ACVR1Q04771 509 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms