RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 MBD3L1Q8WWY6 194 aa9.99□□□□□ -0.81
USP31-201ENST00000219689 MIXL1Q9H2W2 232 aa9.99□□□□□ -0.81
USP31-201ENST00000219689 RASL12Q9NYN1 266 aa9.99□□□□□ -0.81
USP31-201ENST00000219689 PLA2G10O15496 165 aa9.99□□□□□ -0.81
USP31-201ENST00000219689 AESQ08117 197 aa9.99□□□□□ -0.81
USP31-201ENST00000219689 TAS1R1Q7RTX1 841 aa9.99□□□□□ -0.81
USP31-201ENST00000219689 ST6GALNAC3Q8NDV1 305 aa9.99□□□□□ -0.81
USP31-201ENST00000219689 MTFP1Q9UDX5 166 aa9.99□□□□□ -0.81
USP31-201ENST00000219689 LIM2P55344 173 aa9.99□□□□□ -0.81
USP31-201ENST00000219689 KCNK15Q9H427 330 aa9.99□□□□□ -0.81
USP31-201ENST00000219689 MRPS17Q9Y2R5 130 aaKnown RBP9.99□□□□□ -0.81
USP31-201ENST00000219689 IFITM10A6NMD0 228 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 COX7A2P2O60397 106 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 C6orf201Q7Z4U5 140 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 PDLIM5Q96HC4 596 aaKnown RBP9.98□□□□□ -0.81
USP31-201ENST00000219689 SLC35E1Q96K37 410 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 TEX101Q9BY14 249 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 AP5S1Q9NUS5 200 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 COA3Q9Y2R0 106 aaPredicted RBP9.98□□□□□ -0.81
USP31-201ENST00000219689 SCGB1A1P11684 91 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 CYB561D1Q8N8Q1 229 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 OR51E1Q8TCB6 317 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 MCTS1Q9ULC4 181 aaKnown RBP9.98□□□□□ -0.81
USP31-201ENST00000219689 UTS2O95399 124 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 TGIF1Q15583 401 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 SCGB1D4Q6XE38 83 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 ATOH7Q8N100 152 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 WNT3P56703 355 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 RTL8BQ17RB0 113 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 ACSM6Q6P461 480 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 SH2D5Q6ZV89 423 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 UBTD2Q8WUN7 234 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 SLCO1C1Q9NYB5 712 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 PLXNA2O75051 1894 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 ICAM2P13598 275 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 SUB1P53999 127 aaKnown RBP eCLIP9.98□□□□□ -0.81
USP31-201ENST00000219689 EDDM3BP56851 147 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 NXPE3Q969Y0 559 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 ANGPTL4Q9BY76 406 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 MANBALQ9NQG1 85 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 EIF4E3Q8N5X7 224 aaKnown RBP9.98□□□□□ -0.81
USP31-201ENST00000219689 SNRPCP09234 159 aaKnown RBP9.98□□□□□ -0.81
USP31-201ENST00000219689 FPR2P25090 351 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 NMUP48645 174 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 RAB7BQ96AH8 199 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 IL17CQ9P0M4 197 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 CRYAAP02489 173 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 MEOX1P50221 254 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 PRTGQ2VWP7 1150 aa9.98□□□□□ -0.81
USP31-201ENST00000219689 ABLIM3O94929 683 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 EMP1P54849 157 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 ZNF542PQ5EBM4 170 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 PAAF1Q9BRP4 392 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 SHARPINQ9H0F6 387 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 SMAD6O43541 496 aaKnown RBP9.97□□□□□ -0.81
USP31-201ENST00000219689 ANKRD34CP0C6C1 535 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 ZNF816Q0VGE8 651 aaPredicted RBP9.97□□□□□ -0.81
USP31-201ENST00000219689 EDDM3AQ14507 147 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 PRSS54Q6PEW0 395 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 OR10G8Q8NGN5 311 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 SERINC4A6NH21 518 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 ZNF253O75346 499 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 CDX1P47902 265 aaPredicted RBP9.97□□□□□ -0.81
USP31-201ENST00000219689 PFN3P60673 137 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 PABPC1L2AQ5JQF8 200 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 ADAD2Q8NCV1 583 aaKnown RBP9.97□□□□□ -0.81
USP31-201ENST00000219689 OR4A4PQ8NGN8 299 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 NMBP08949 121 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 ZNF79Q15937 498 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 USP53Q70EK8 1073 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 ZNF707Q96C28 371 aaPredicted RBP9.97□□□□□ -0.81
USP31-201ENST00000219689 KLK2P20151 261 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 G6PCP35575 357 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 CSNK1DP48730 415 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 TNFRSF9Q07011 255 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 BSXQ3C1V8 233 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 IRF7Q92985 503 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 KLHDC7BQ96G42 594 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 TCTN2Q96GX1 697 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 LRFN3Q9BTN0 628 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 TECRQ9NZ01 308 aaKnown RBP9.97□□□□□ -0.81
USP31-201ENST00000219689 ABHD16AO95870 558 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 BRS3P32247 399 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 CSNK1EP49674 416 aaKnown RBP9.97□□□□□ -0.81
USP31-201ENST00000219689 FLT3LGP49771 235 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 ULBP2Q9BZM5 246 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 GPR84Q9NQS5 396 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 TOPAZ1Q8N9V7 1692 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 LOC285556D6RIA3 1793 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 OR10G3Q8NGC4 313 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 NEIL1Q96FI4 390 aaPredicted RBP9.97□□□□□ -0.81
USP31-201ENST00000219689 PHLPP1O60346 1717 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 TRAV36DV7A0A075B6V5 113 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 A0A0B4J293 547 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 EID2BQ96D98 161 aa9.97□□□□□ -0.81
USP31-201ENST00000219689 ASPDHA6ND91 283 aa9.96□□□□□ -0.81
USP31-201ENST00000219689 NDUFS6O75380 124 aaKnown RBP9.96□□□□□ -0.81
USP31-201ENST00000219689 SFT2D2O95562 160 aa9.96□□□□□ -0.81
USP31-201ENST00000219689 ELNP15502 786 aa9.96□□□□□ -0.81
USP31-201ENST00000219689 CST5P28325 142 aaPredicted RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms