RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Olfr267A2AM35 313 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Gm15821A6X8J8 139 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 GzmaP11032 260 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Crisp2P16563 243 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Rbp2Q08652 134 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Slc25a33Q3TZX3 320 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Ube2fbQ3UWQ3 185 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 AstlQ6HA09 435 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 AspaQ8R3P0 312 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 MpiQ924M7 423 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Slc29a3Q99P65 475 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Kcnj10Q9JM63 379 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Lrit3W8DXL4 681 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 IfngP01580 155 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Tcl1aP56280 116 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 HfeP70387 359 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Wbp2P97765 261 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Fam187bQ0VAY3 358 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 LipnQ3U4B4 400 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Gm826Q3UQ74 109 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 V1ra11Q8R2E6 318 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Olfr1411Q8VFC4 323 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Vmn1r45Q8VIC7 318 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Emid1Q91VF5 444 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Pofut1Q91ZW2 393 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Washc3Q9CR27 194 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Atp5sQ9CRA7 200 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Gli3Q61602 1583 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Trav10nA0A075B622 114 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Trav10A0A075B642 114 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 S1pr2P52592 352 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Ube2g2P60605 165 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 PcnpQ6P8I4 178 aaKnown RBP13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Olfr884Q7TRE1 309 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Gprin3Q8BWS5 763 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Ykt6Q9CQW1 198 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Dnmt3lQ9CWR8 421 aaKnown RBP13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Upk1aQ9D132 257 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Ak3Q9WTP7 227 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Psg20E9Q9B4 475 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Foxq1O70220 400 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Itln1O88310 313 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Rpl12P35979 165 aaKnown RBP13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Fgf9P54130 208 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Cnrip1Q5M8N0 164 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 SspnQ62147 216 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Olfr1386Q7TQT0 309 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Olfr453Q7TRV7 317 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 4922502D21RikQ8C634 189 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 ZxdcQ8C8V1 858 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Rfc3Q8R323 356 aaKnown RBP13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Olfr509Q8VF20 321 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Slc31a2Q9CPU9 143 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Vmn1r41Q9EQ44 310 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Zfp142G5E869 1843 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Gm28557A0A087WQQ0 336 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 BC051665E9Q623 330 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 GusbP12265 648 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Il1r1P13504 576 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Klk1b11P15946 261 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 NppcQ61839 126 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Yipf6Q8BR70 236 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Tssk5Q8C1R0 372 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Stpg2Q8C8J0 561 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Flywch1Q8CI03 673 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Vmn1r72Q8K3N7 306 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Lgi3Q8K406 548 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Olfr639Q8VGY8 316 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Ppil1Q9D0W5 166 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Galnt16Q9JJ61 558 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Tusc2Q9WVF8 110 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Olfr1066A2AK62 313 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Olfr547E9PXN3 311 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Vmn1r7E9Q8T0 311 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Vmn1r34G3XA52 309 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 NumblO08919 604 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Csf3P09920 208 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Hrh3P58406 445 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Tpt1P63028 172 aaKnown RBP13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 LipkQ8BM14 398 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Mmp28Q8CGV8 520 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Syt13Q9EQT6 426 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 GrinaQ9ESF4 345 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Olfr545Q9WU94 316 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Ighv1-24A0A0A6YY24 117 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Calhm1D3Z291 348 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Sub1P11031 127 aaKnown RBP13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Scand1Q2M4I6 142 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Mcrip1Q3UGS4 97 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Klf3Q60980 344 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Gtdc1Q8BW56 445 aa13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 StrapQ9Z1Z2 350 aaKnown RBP13.38□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Morn1A2RTS7 477 aa13.37□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 CatsperdE9Q9F6 805 aa13.37□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Mtnd4lP03903 98 aa13.37□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Tdpoz1P0DMR5 365 aa13.37□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Megf11Q80T91 1091 aa13.37□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Med19Q8C1S0 244 aa13.37□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 TprkbQ8QZZ7 175 aa13.37□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms