RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 SLC25A38Q96DW6 304 aa14.85□□□□□ -0.03
PHGDH-234ENST00000642041 ABHD1Q96SE0 405 aa14.85□□□□□ -0.03
PHGDH-234ENST00000642041 C12orf49Q9H741 205 aa14.85□□□□□ -0.03
PHGDH-234ENST00000642041 PLEKHF2Q9H8W4 249 aa14.85□□□□□ -0.03
PHGDH-234ENST00000642041 B3GNT2Q9NY97 397 aa14.85□□□□□ -0.03
PHGDH-234ENST00000642041 CRLF1O75462 422 aa14.84□□□□□ -0.03
PHGDH-234ENST00000642041 IGHV3-9P01782 118 aa14.84□□□□□ -0.03
PHGDH-234ENST00000642041 CSF1P09603 554 aa14.84□□□□□ -0.03
PHGDH-234ENST00000642041 TMIGD3P0DMS9 266 aaPredicted RBP14.84□□□□□ -0.03
PHGDH-234ENST00000642041 CBR1P16152 277 aa14.84□□□□□ -0.03
PHGDH-234ENST00000642041 PRSS3P35030 304 aa14.84□□□□□ -0.03
PHGDH-234ENST00000642041 KIR2DL2P43627 348 aaPredicted RBP14.84□□□□□ -0.03
PHGDH-234ENST00000642041 RBP2P50120 134 aa14.84□□□□□ -0.03
PHGDH-234ENST00000642041 BCAP31P51572 246 aa14.84□□□□□ -0.03
PHGDH-234ENST00000642041 ATP1B3P54709 279 aa14.84□□□□□ -0.03
PHGDH-234ENST00000642041 TAS2R20P59543 309 aa14.84□□□□□ -0.03
PHGDH-234ENST00000642041 TMEM42Q69YG0 159 aa14.84□□□□□ -0.03
PHGDH-234ENST00000642041 AWAT2Q6E213 333 aa14.84□□□□□ -0.03
PHGDH-234ENST00000642041 GDPD3Q7L5L3 318 aa14.84□□□□□ -0.03
PHGDH-234ENST00000642041 LIX1LQ8IVB5 337 aa14.84□□□□□ -0.03
PHGDH-234ENST00000642041 POM121L2Q96KW2 1035 aa14.84□□□□□ -0.03
PHGDH-234ENST00000642041 ATG5Q9H1Y0 275 aa14.84□□□□□ -0.03
PHGDH-234ENST00000642041 CNTD2Q9H8S5 307 aa14.84□□□□□ -0.03
PHGDH-234ENST00000642041 RHOFQ9HBH0 211 aa14.84□□□□□ -0.03
PHGDH-234ENST00000642041 ZNF319Q9P2F9 582 aa14.84□□□□□ -0.03
PHGDH-234ENST00000642041 PRSS50Q9UI38 385 aa14.84□□□□□ -0.03
PHGDH-234ENST00000642041 TBC1D24Q9ULP9 559 aa14.84□□□□□ -0.03
PHGDH-234ENST00000642041 TMEM272A0A1B0GTI8 110 aa14.83□□□□□ -0.04
PHGDH-234ENST00000642041 ORC5O43913 435 aa14.83□□□□□ -0.04
PHGDH-234ENST00000642041 CST4P01036 141 aa14.83□□□□□ -0.04
PHGDH-234ENST00000642041 NRASP01111 189 aa14.83□□□□□ -0.04
PHGDH-234ENST00000642041 TRAPPC2P0DI81 140 aa14.83□□□□□ -0.04
PHGDH-234ENST00000642041 TRAPPC2BP0DI82 140 aa14.83□□□□□ -0.04
PHGDH-234ENST00000642041 CDK2P24941 298 aa14.83□□□□□ -0.04
PHGDH-234ENST00000642041 SNTB2Q13425 540 aaKnown RBP14.83□□□□□ -0.04
PHGDH-234ENST00000642041 KISS1Q15726 138 aa14.83□□□□□ -0.04
PHGDH-234ENST00000642041 ASPHD2Q6ICH7 369 aa14.83□□□□□ -0.04
PHGDH-234ENST00000642041 MRPL21Q7Z2W9 205 aaKnown RBP14.83□□□□□ -0.04
PHGDH-234ENST00000642041 CNEP1R1Q8N9A8 125 aa14.83□□□□□ -0.04
PHGDH-234ENST00000642041 ZSCAN4Q8NAM6 433 aaPredicted RBP14.83□□□□□ -0.04
PHGDH-234ENST00000642041 OR52N4Q8NGI2 321 aa14.83□□□□□ -0.04
PHGDH-234ENST00000642041 OR56B1Q8NGI3 324 aa14.83□□□□□ -0.04
PHGDH-234ENST00000642041 CHAC2Q8WUX2 184 aa14.83□□□□□ -0.04
PHGDH-234ENST00000642041 CREB3L1Q96BA8 519 aa14.83□□□□□ -0.04
PHGDH-234ENST00000642041 ORAI1Q96D31 301 aa14.83□□□□□ -0.04
PHGDH-234ENST00000642041 BORCS8Q96FH0 119 aa14.83□□□□□ -0.04
PHGDH-234ENST00000642041 HIST1H2AAQ96QV6 131 aa14.83□□□□□ -0.04
PHGDH-234ENST00000642041 OR10A4Q9H209 315 aa14.83□□□□□ -0.04
PHGDH-234ENST00000642041 DPAGT1Q9H3H5 408 aa14.83□□□□□ -0.04
PHGDH-234ENST00000642041 MRPS28Q9Y2Q9 187 aaKnown RBP14.83□□□□□ -0.04
PHGDH-234ENST00000642041 RBMX2Q9Y388 322 aaKnown RBP14.83□□□□□ -0.04
PHGDH-234ENST00000642041 MPC1Q9Y5U8 109 aa14.83□□□□□ -0.04
PHGDH-234ENST00000642041 CACNG2Q9Y698 323 aa14.83□□□□□ -0.04
PHGDH-234ENST00000642041 ANK2Q01484 3957 aa14.83□□□□□ -0.04
PHGDH-234ENST00000642041 A0A0G2JNJ9 132 aa14.82□□□□□ -0.04
PHGDH-234ENST00000642041 hCG_38984A0A1B0GV85 526 aa14.82□□□□□ -0.04
PHGDH-234ENST00000642041 FUOMA2VDF0 154 aa14.82□□□□□ -0.04
PHGDH-234ENST00000642041 SMAD7O15105 426 aaKnown RBP14.82□□□□□ -0.04
PHGDH-234ENST00000642041 EEF1E1O43324 174 aaKnown RBP14.82□□□□□ -0.04
PHGDH-234ENST00000642041 KDM4BO94953 1096 aa14.82□□□□□ -0.04
PHGDH-234ENST00000642041 GSTP1P09211 210 aaKnown RBP14.82□□□□□ -0.04
PHGDH-234ENST00000642041 PTGFRP43088 359 aa14.82□□□□□ -0.04
PHGDH-234ENST00000642041 CBX5P45973 191 aa14.82□□□□□ -0.04
PHGDH-234ENST00000642041 PTH2RP49190 550 aa14.82□□□□□ -0.04
PHGDH-234ENST00000642041 CLDN12P56749 244 aa14.82□□□□□ -0.04
PHGDH-234ENST00000642041 BTG1P62324 171 aa14.82□□□□□ -0.04
PHGDH-234ENST00000642041 FAM3AP98173 230 aa14.82□□□□□ -0.04
PHGDH-234ENST00000642041 GABRA6Q16445 453 aa14.82□□□□□ -0.04
PHGDH-234ENST00000642041 PNLIPRP3Q17RR3 467 aa14.82□□□□□ -0.04
PHGDH-234ENST00000642041 GFOD2Q3B7J2 385 aa14.82□□□□□ -0.04
PHGDH-234ENST00000642041 Q5PR19 223 aa14.82□□□□□ -0.04
PHGDH-234ENST00000642041 ZNF101Q8IZC7 436 aa14.82□□□□□ -0.04
PHGDH-234ENST00000642041 C9orf106Q8NAJ2 232 aa14.82□□□□□ -0.04
PHGDH-234ENST00000642041 CPEB3Q8NE35 698 aaKnown RBP14.82□□□□□ -0.04
PHGDH-234ENST00000642041 PXT1Q8NFP0 134 aa14.82□□□□□ -0.04
PHGDH-234ENST00000642041 YIPF5Q969M3 257 aa14.82□□□□□ -0.04
PHGDH-234ENST00000642041 TRIM63Q969Q1 353 aa14.82□□□□□ -0.04
PHGDH-234ENST00000642041 LYZL4Q96KX0 146 aa14.82□□□□□ -0.04
PHGDH-234ENST00000642041 ZNF224Q9NZL3 707 aa14.82□□□□□ -0.04
PHGDH-234ENST00000642041 Q9UFV3 132 aa14.82□□□□□ -0.04
PHGDH-234ENST00000642041 FAM215AQ9Y5M1 114 aa14.82□□□□□ -0.04
PHGDH-234ENST00000642041 A0A096LPE4 126 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 A0A1W2PPZ6 126 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 C5orf49A4QMS7 147 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 TMEM14DPA8MWL7 114 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 H7C417 338 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 AKR7A2O43488 359 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 CA11O75493 328 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 CYB5AP00167 134 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 DHFRP00374 187 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 F12P00748 615 aaPredicted RBP14.81□□□□□ -0.04
PHGDH-234ENST00000642041 HLA-HP01893 362 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 MELTFP08582 738 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 DBHP09172 617 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 GLI4P10075 376 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 NAT2P11245 290 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 IGHV1-2P23083 117 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 CEACAM8P31997 349 aaPredicted RBP14.81□□□□□ -0.04
PHGDH-234ENST00000642041 RAD52P43351 418 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 SNAI3Q3KNW1 292 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms