RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	DUX4L2	P0CJ85	424 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	DUX4L3	P0CJ86	424 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	DUX4L4	P0CJ87	422 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	DUX4L5	P0CJ88	424 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	DUX4L6	P0CJ89	424 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	DUX4L7	P0CJ90	424 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	GLRA1	P23415	457 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	ZNF91	Q05481	1191 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	HAGHL	Q6PII5	290 aa	Predicted RBP	12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	DUX4L9	Q6RFH8	374 aa	Predicted RBP	12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	BTN2A1	Q7KYR7	527 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	ACBD7	Q8N6N7	88 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	FAM216B	Q8N7L0	139 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	PNLDC1	Q8NA58	520 aa	Known RBP	12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	CCDC54	Q8NEL0	328 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	ZNF555	Q8NEP9	628 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	OR5T2	Q8NGG2	359 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	ST8SIA4	Q92187	359 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	LGALS12	Q96DT0	336 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	ADI1	Q9BV57	179 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	PLEKHA1	Q9HB21	404 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	SNTG1	Q9NSN8	517 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	SMPD3	Q9NY59	655 aa	Predicted RBP	12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	DUX4	Q9UBX2	424 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	ZNF69	Q9UC07	566 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	IGHV3OR16-10	A0A075B7F0	116 aa		12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939	NKX6-3	A6NJ46	265 aa		12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939	ZNF879	B4DU55	563 aa		12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939		H3BSH0	61 aa		12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939	NDUFB3	O43676	98 aa		12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939	UBC	P0CG48	685 aa	Known RBP	12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939	IGHV4-38-2	P0DP08	117 aa		12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939	DBT	P11182	482 aa	Known RBP	12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939	AMY2B	P19961	511 aa		12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939	KIR3DL2	P43630	455 aa		12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939	HAAO	P46952	286 aa		12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939	TGM4	P49221	684 aa		12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939	OR12D2	P58182	307 aa		12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939	TUSC1	Q2TAM9	212 aa		12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939	LRRC10	Q5BKY1	277 aa		12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939	ZNF573	Q86YE8	665 aa		12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939	BCL6B	Q8N143	479 aa	Predicted RBP	12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939	OR2G2	Q8NGZ5	317 aa		12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939	ANGPTL6	Q8NI99	470 aa		12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939	RNF166	Q96A37	237 aa	Predicted RBP	12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939	TMIGD2	Q96BF3	282 aa		12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939	MRPL48	Q96GC5	212 aa	Known RBP	12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939	MS4A7	Q9GZW8	240 aa	Predicted RBP	12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939	NLK	Q9UBE8	527 aa		12.45	□□□□□ -0.42
PHGDH-231	ENST00000641939	TRAV40	A0A0B4J280	105 aa		12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	LOC107986453	A0A1B0GWG9	222 aa		12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	PQLC2L	A1A4F0	135 aa		12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	ANKRD61	A6NGH8	418 aa		12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	OR2AT4	A6NND4	320 aa		12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	TRIM77	I1YAP6	450 aa		12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939		J3QT63	122 aa		12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	GPR37	O15354	613 aa		12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	PLAT	P00750	562 aa		12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	ACTA2	P62736	377 aa		12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	ACTG2	P63267	376 aa		12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	IKZF1	Q13422	519 aa		12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	RCN1	Q15293	331 aa		12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	FDX2	Q6P4F2	183 aa		12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	RBMS3	Q6XE24	437 aa	Known RBP	12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	ZNF788	Q6ZQV5	615 aa		12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	FGFRL1	Q8N441	504 aa		12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	SIGLECL1	Q8N7X8	197 aa		12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	MED30	Q96HR3	178 aa		12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	GAFA1	Q96PS6	74 aa		12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	MYCBP	Q99417	103 aa	Predicted RBP	12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	PCGF1	Q9BSM1	259 aa		12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	AMBN	Q9NP70	447 aa		12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	RASL12	Q9NYN1	266 aa		12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	RPUSD1	Q9UJJ7	312 aa	Known RBP	12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939	SLC7A11	Q9UPY5	501 aa		12.44	□□□□□ -0.42
PHGDH-231	ENST00000641939		J3QLW9	94 aa		12.43	□□□□□ -0.42
PHGDH-231	ENST00000641939	GATB	O75879	557 aa	Known RBP	12.43	□□□□□ -0.42
PHGDH-231	ENST00000641939	TOX4	O94842	621 aa		12.43	□□□□□ -0.42
PHGDH-231	ENST00000641939	FADS2	O95864	444 aa	Known RBP	12.43	□□□□□ -0.42
PHGDH-231	ENST00000641939	SFTPB	P07988	381 aa		12.43	□□□□□ -0.42
PHGDH-231	ENST00000641939	HTR1A	P08908	422 aa		12.43	□□□□□ -0.42
PHGDH-231	ENST00000641939	ACAA1	P09110	424 aa	Predicted RBP	12.43	□□□□□ -0.42
PHGDH-231	ENST00000641939	PGA5	P0DJD9	388 aa		12.43	□□□□□ -0.42
PHGDH-231	ENST00000641939	MMP9	P14780	707 aa		12.43	□□□□□ -0.42
PHGDH-231	ENST00000641939	ZNF19	P17023	458 aa		12.43	□□□□□ -0.42
PHGDH-231	ENST00000641939	IL13RA1	P78552	427 aa		12.43	□□□□□ -0.42
PHGDH-231	ENST00000641939	RAB40B	Q12829	278 aa		12.43	□□□□□ -0.42
PHGDH-231	ENST00000641939	GALE	Q14376	348 aa		12.43	□□□□□ -0.42
PHGDH-231	ENST00000641939	GPR157	Q5UAW9	335 aa		12.43	□□□□□ -0.42
PHGDH-231	ENST00000641939	TMEM244	Q5VVB8	128 aa		12.43	□□□□□ -0.42
PHGDH-231	ENST00000641939	METTL11B	Q5VVY1	283 aa		12.43	□□□□□ -0.42
PHGDH-231	ENST00000641939	C9orf139	Q6ZV77	190 aa		12.43	□□□□□ -0.42
PHGDH-231	ENST00000641939	LHFPL3	Q86UP9	236 aa		12.43	□□□□□ -0.42
PHGDH-231	ENST00000641939	RDH10	Q8IZV5	341 aa		12.43	□□□□□ -0.42
PHGDH-231	ENST00000641939	ZDHHC22	Q8N966	263 aa		12.43	□□□□□ -0.42
PHGDH-231	ENST00000641939	POC1A	Q8NBT0	407 aa		12.43	□□□□□ -0.42
PHGDH-231	ENST00000641939	APH1B	Q8WW43	257 aa		12.43	□□□□□ -0.42
PHGDH-231	ENST00000641939	C10orf35	Q96D05	121 aa		12.43	□□□□□ -0.42
PHGDH-231	ENST00000641939	PELI1	Q96FA3	418 aa		12.43	□□□□□ -0.42

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