RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 LOC107986453A0A1B0GWG9 222 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 PLSCR5A0PG75 271 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 DPPA5A6NC42 116 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 ACOD1A6NK06 481 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 OR4C45A6NMZ5 311 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 PPIAL4DF5H284 164 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 P2RY10O00398 339 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 ZFPL1O95159 310 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 NGFP01138 241 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 TTRP02766 147 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 UBCP0CG48 685 aaKnown RBP8.39□□□□□ -1.07
PHGDH-222ENST00000641587 PPIAL4FP0DN26 164 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 GADD45AP24522 165 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 PSMA1P25786 263 aaKnown RBP8.39□□□□□ -1.07
PHGDH-222ENST00000641587 GABRA5P31644 462 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 TGFBR2P37173 567 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 CCR9P51686 369 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 MALLQ13021 153 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 GPR50Q13585 617 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 TRAM1Q15629 374 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 RSPO1Q2MKA7 263 aaPredicted RBP8.39□□□□□ -1.07
PHGDH-222ENST00000641587 KRTAP27-1Q3LI81 207 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 TIMM50Q3ZCQ8 353 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 ELMOD2Q8IZ81 293 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 OR52H1Q8NGJ2 320 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 OR13C5Q8NGS8 318 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 ABHD4Q8TB40 342 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 PPP1R14AQ96A00 147 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 SLC25A28Q96A46 364 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 YIPF6Q96EC8 236 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 CHCHD6Q9BRQ6 235 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 FUNDC2Q9BWH2 189 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 MS4A7Q9GZW8 240 aaPredicted RBP8.39□□□□□ -1.07
PHGDH-222ENST00000641587 POFUT1Q9H488 388 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 ZMAT3Q9HA38 289 aaKnown RBP8.39□□□□□ -1.07
PHGDH-222ENST00000641587 PATZ1Q9HBE1 687 aaKnown RBP8.39□□□□□ -1.07
PHGDH-222ENST00000641587 SSR3Q9UNL2 185 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 ZNF281Q9Y2X9 895 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 TRAV40A0A0B4J280 105 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 POM121CA8CG34 1229 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 F5H0A9 414 aaPredicted RBP8.38□□□□□ -1.07
PHGDH-222ENST00000641587 XRCC2O43543 280 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 SYT7O43581 403 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 AIREO43918 545 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 SERPINA3P01011 423 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 SOX2P48431 317 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 PPP1CBP62140 327 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 LSM3P62310 102 aaKnown RBP8.38□□□□□ -1.07
PHGDH-222ENST00000641587 TNFAIP6P98066 277 aaPredicted RBP8.38□□□□□ -1.07
PHGDH-222ENST00000641587 ZMYND11Q15326 602 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 MOGQ16653 247 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 SNAI3Q3KNW1 292 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 TMEM244Q5VVB8 128 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 MBNL2Q5VZF2 373 aaKnown RBP8.38□□□□□ -1.07
PHGDH-222ENST00000641587 RDH10Q8IZV5 341 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 MS4A15Q8N5U1 240 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 KIR3DL3Q8N743 410 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 OR13C3Q8NGS6 347 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 OR2AE1Q8NHA4 323 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 OR51E1Q8TCB6 317 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 RPS4Y2Q8TD47 263 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 RNF166Q96A37 237 aaPredicted RBP8.38□□□□□ -1.07
PHGDH-222ENST00000641587 APOBEC3DQ96AK3 386 aaPredicted RBP8.38□□□□□ -1.07
PHGDH-222ENST00000641587 REEP6Q96HR9 211 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 FAM71F1Q96KD3 344 aaPredicted RBP8.38□□□□□ -1.07
PHGDH-222ENST00000641587 PGLYRP3Q96LB9 341 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 MRI1Q9BV20 369 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 EGLN1Q9GZT9 426 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 SLITRK2Q9H156 845 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 OR51E2Q9H255 320 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 GPR84Q9NQS5 396 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 BATF3Q9NR55 127 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 TNFRSF19Q9NS68 423 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 TMEM106BQ9NUM4 274 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 PTTG3PQ9NZH4 202 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 HHLA2Q9UM44 414 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 STUB1Q9UNE7 303 aa8.38□□□□□ -1.07
PHGDH-222ENST00000641587 POLR3KQ9Y2Y1 108 aaPredicted RBP8.38□□□□□ -1.07
PHGDH-222ENST00000641587 SMIM31A0A1B0GVY4 71 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 C5orf63A6NC05 138 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 A8MXK9 166 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 H3BSA7 217 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 GABRPO00591 440 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 TIMM8AO60220 97 aaPredicted RBP8.37□□□□□ -1.07
PHGDH-222ENST00000641587 ZNF205O95201 554 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 HLA-DPB1P04440 258 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 CD1AP06126 327 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 CD55P08174 381 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 ADH4P08319 380 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 OCM2P0CE71 109 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 ZNF20P17024 532 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 ANOS1P23352 680 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 CD80P33681 288 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 BTG1P62324 171 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 FABP5Q01469 135 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 INSL4Q14641 139 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 YIF1BQ5BJH7 314 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 GLYATL3Q5SZD4 288 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 UNQ6126/PRO20091Q6UXV3 157 aa8.37□□□□□ -1.07
PHGDH-222ENST00000641587 Q6ZR03 302 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms