RNA–Protein interactions for RNA: ENST00000641487.1

CASC19-233, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 966 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-233	ENST00000641487	EML4	Q9HC35	981 aa	Known RBP	4.8	□□□□□ -1.64
CASC19-233	ENST00000641487	MYOZ1	Q9NP98	299 aa	Predicted RBP	4.8	□□□□□ -1.64
CASC19-233	ENST00000641487	ACER3	Q9NUN7	267 aa		4.8	□□□□□ -1.64
CASC19-233	ENST00000641487	IL36RN	Q9UBH0	155 aa		4.8	□□□□□ -1.64
CASC19-233	ENST00000641487	KCNS2	Q9ULS6	477 aa		4.8	□□□□□ -1.64
CASC19-233	ENST00000641487	SLC35A3	Q9Y2D2	325 aa		4.8	□□□□□ -1.64
CASC19-233	ENST00000641487	HDGFL3	Q9Y3E1	203 aa		4.8	□□□□□ -1.64
CASC19-233	ENST00000641487	DNAJC15	Q9Y5T4	150 aa		4.8	□□□□□ -1.64
CASC19-233	ENST00000641487	PTGDR2	Q9Y5Y4	395 aa		4.8	□□□□□ -1.64
CASC19-233	ENST00000641487	PEX16	Q9Y5Y5	336 aa		4.8	□□□□□ -1.64
CASC19-233	ENST00000641487	NPIPA5	A0A0B4J1W7	369 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	KBTBD11-OT1	A0A1B0GTJ5	212 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	COPE	O14579	308 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	KIAA0513	O60268	411 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	EIF1B	O60739	113 aa	Known RBP	4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	NDUFS6	O75380	124 aa	Known RBP	4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	UGT2B17	O75795	530 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	LINC00032	P0C843	101 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	FAM106CP	P0CH98	169 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	IGHV4-31	P0DP07	118 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	HKR1	P10072	659 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	LAMP1	P11279	417 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	PRPS1L1	P21108	318 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	EDNRA	P25101	427 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	SERPINB5	P36952	375 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	PDLIM4	P50479	330 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	ZNF83	P51522	516 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	TUBA1B	P68363	451 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	H3F3A	P84243	136 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	PTGR1	Q14914	329 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	CHI3L2	Q15782	390 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	GABRA6	Q16445	453 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	PSG3	Q16557	428 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	ASPHD1	Q5U4P2	390 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	OR52W1	Q6IF63	320 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487		Q6ZRG5	221 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	TUBA1A	Q71U36	451 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	GRINA	Q7Z429	371 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	C10orf107	Q8IVU9	208 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	RNF113B	Q8IZP6	322 aa	Known RBP	4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	FGFRL1	Q8N441	504 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	ZNF614	Q8N883	585 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	OR7A2P	Q8NGA2	310 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	TWIST2	Q8WVJ9	160 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	OR7D2	Q96RA2	312 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	SDF2	Q99470	211 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	RBM4B	Q9BQ04	359 aa	Known RBP	4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	NEURL2	Q9BR09	285 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	C19orf24	Q9BVV8	132 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	RBM4	Q9BWF3	364 aa	Known RBP	4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	EXOSC3	Q9NQT5	275 aa	Known RBP	4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	SLC17A5	Q9NRA2	495 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	EXD2	Q9NVH0	621 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	MRPL39	Q9NYK5	338 aa	Known RBP	4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	ADA2	Q9NZK5	511 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	CLN8	Q9UBY8	286 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	PRDM4	Q9UKN5	801 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	TRAPPC4	Q9Y296	219 aa		4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	4.79	□□□□□ -1.64	9e-8	■■■■□ 24.4
CASC19-233	ENST00000641487	CHD3	Q12873	2000 aa	Known RBP	4.79	□□□□□ -1.64
CASC19-233	ENST00000641487	CAD	P27708	2225 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	TRBV5-5	A0A0J9YX44	114 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	FAM74A7	A6NL05	159 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	SRRM4	A7MD48	611 aa	Known RBP	4.78	□□□□□ -1.64
CASC19-233	ENST00000641487		M0R1B8	84 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	ATP5H	O75947	161 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	PDE5A	O76074	875 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	AHSA1	O95433	338 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	C6orf47	O95873	294 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	IGHV3-9	P01782	118 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	EFNA1	P20827	205 aa	Predicted RBP	4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	IGFBP5	P24593	272 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	MPG	P29372	298 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	NR4A2	P43354	598 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	NPBWR2	P48146	333 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	RASSF2	P50749	326 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	ZP1	P60852	638 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	PRPS1	P60891	318 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	TSPAN5	P62079	268 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	SNRPD2	P62316	118 aa	Known RBP	4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	HBA1	P69905	142 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	SLC35A1	P78382	337 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	LGALS3BP	Q08380	585 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	STX3	Q13277	289 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	HAGH	Q16775	308 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	VMAC	Q2NL98	169 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	NDUFAF6	Q330K2	333 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	ARHGAP11B	Q3KRB8	267 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	FAM74A3	Q4VXF1	159 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	ATP6AP1L	Q52LC2	224 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	FAM120AOS	Q5T036	256 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	STEAP1B	Q6NZ63	245 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	ULK3	Q6PHR2	472 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	UGT2A3	Q6UWM9	527 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	C6orf120	Q7Z4R8	191 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	RNF130	Q86XS8	419 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	RIMKLA	Q8IXN7	391 aa		4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	SELENOH	Q8IZQ5	122 aa	Known RBP	4.78	□□□□□ -1.64
CASC19-233	ENST00000641487	RFLNB	Q8N5W9	214 aa		4.78	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms