RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	FNDC11	Q9BVV2	318 aa		7.07	□□□□□ -1.28
RTTN-223	ENST00000640931	FAM60A	Q9NP50	221 aa		7.07	□□□□□ -1.28
RTTN-223	ENST00000640931	NRIP3	Q9NQ35	241 aa		7.07	□□□□□ -1.28
RTTN-223	ENST00000640931	CENPM	Q9NSP4	180 aa		7.07	□□□□□ -1.28
RTTN-223	ENST00000640931	WSB2	Q9NYS7	404 aa	Predicted RBP	7.07	□□□□□ -1.28
RTTN-223	ENST00000640931	PEF1	Q9UBV8	284 aa	Known RBP	7.07	□□□□□ -1.28
RTTN-223	ENST00000640931	CES1P1	Q9UKY3	287 aa		7.07	□□□□□ -1.28
RTTN-223	ENST00000640931	NTNG1	Q9Y2I2	539 aa		7.07	□□□□□ -1.28
RTTN-223	ENST00000640931	ZNF337	Q9Y3M9	751 aa		7.07	□□□□□ -1.28
RTTN-223	ENST00000640931	TRBV4-1	A0A0J9YWV2	114 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	7.06	□□□□□ -1.28
RTTN-223	ENST00000640931		A6NIN4	97 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931		H3BN98	237 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	PYCARD-AS1	I3L0S3	204 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	PLPP2	O43688	288 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	SCGB1D1	O95968	90 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	WNT11	O96014	354 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	TNF	P01375	233 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	ATP1B1	P05026	303 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	OR13C7	P0DN81	318 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	GLB1	P16278	677 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	FAH	P16930	419 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	ATF1	P18846	271 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	SDHB	P21912	280 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	CHAT	P28329	748 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	PTGER4	P35408	488 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	SOX18	P35713	384 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	SNCA	P37840	140 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	RAB9A	P51151	201 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	PCBP3	P57721	371 aa	Known RBP	7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	SLC35A1	P78382	337 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	PAX2	Q02962	417 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	DMWD	Q09019	674 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	RAB40B	Q12829	278 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	CSRP2	Q16527	193 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	LY6G6F	Q5SQ64	297 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	TMEM225	Q6GV28	225 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	REEP3	Q6NUK4	255 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	FIGLA	Q6QHK4	219 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	SMARCD3	Q6STE5	483 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	CD300LD	Q6UXZ3	194 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	NR2C2AP	Q86WQ0	139 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	RAB42	Q8N4Z0	105 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	CYB561A3	Q8NBI2	242 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	SNIP1	Q8TAD8	396 aa	Known RBP	7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	TMEM239	Q8WW34	195 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	NEURL3	Q96EH8	262 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	SNX22	Q96L94	193 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	CIB3	Q96Q77	187 aa	Predicted RBP	7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	IL4I1	Q96RQ9	567 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	PHF7	Q9BWX1	381 aa	Predicted RBP	7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	SMDT1	Q9H4I9	107 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	AUNIP	Q9H7T9	357 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	IL21R	Q9HBE5	538 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	DSPP	Q9NZW4	1301 aa		7.06	□□□□□ -1.28
RTTN-223	ENST00000640931	WDFY3	Q8IZQ1	3526 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	IGHV1OR15-9	A0A0B4J2B8	117 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	CENPVL1	A0A0U1RR11	272 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	C10orf142	B7Z368	130 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931		H0YGG7	62 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	LDB3	O75112	727 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	ZIC2	O95409	532 aa	Predicted RBP	7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	PMS2P2	O95744	297 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	TNFSF4	P23510	183 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	CXCR1	P25024	350 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	TIMP3	P35625	211 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	FRK	P42685	505 aa	Predicted RBP	7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	LPAR6	P43657	344 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	SULT1A2	P50226	295 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	UCP2	P55851	309 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	ARF3	P61204	181 aa	Predicted RBP	7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	RAB11A	P62491	216 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	EBP	Q15125	230 aa	Known RBP	7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	NSDHL	Q15738	373 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	TMEM183B	Q1AE95	376 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	IFI44L	Q53G44	452 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	RTL6	Q6ICC9	239 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	OR4A47	Q6IF82	309 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	TRIM40	Q6P9F5	258 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	DGAT2L6	Q6ZPD8	337 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	IZUMO1	Q8IYV9	350 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	METTL27	Q8N6F8	245 aa	Predicted RBP	7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	STPG4	Q8N801	248 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	ZNF485	Q8NCK3	441 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	TSTD1	Q8NFU3	115 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	C15orf40	Q8WUR7	153 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	OR2A5	Q96R48	311 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	GINS3	Q9BRX5	216 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	ALG12	Q9BV10	488 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	LRRC61	Q9BV99	259 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	NELFA	Q9H3P2	528 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	C1orf198	Q9H425	327 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	TBC1D17	Q9HA65	648 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	KCNJ16	Q9NPI9	418 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	MRPL22	Q9NWU5	206 aa	Known RBP	7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	HRASLS2	Q9NWW9	162 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	OR6C3	Q9NZP0	311 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	CNIH4	Q9P003	139 aa		7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	MRPL27	Q9P0M9	148 aa	Known RBP	7.05	□□□□□ -1.28
RTTN-223	ENST00000640931	WNT16	Q9UBV4	365 aa		7.05	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms