RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 CPEP16870 476 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 USF1P22415 310 aaPredicted RBP11.09□□□□□ -0.63
GTF3A-209ENST00000640289 CD80P33681 288 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 FUT6P51993 359 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 BTG1P62324 171 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 RPS25P62851 125 aaKnown RBP11.09□□□□□ -0.63
GTF3A-209ENST00000640289 GPR50Q13585 617 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 SSX1Q16384 188 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 PEG10Q86TG7 708 aaKnown RBP11.09□□□□□ -0.63
GTF3A-209ENST00000640289 ANGPTL5Q86XS5 388 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 CALHM1Q8IU99 346 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 PHC2Q8IXK0 858 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 C1orf87Q8N0U7 546 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 OR51A2Q8NGJ7 313 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 OR5D14Q8NGL3 314 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 CLDND2Q8NHS1 167 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 AQP3Q92482 292 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 HPS1Q92902 700 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 TMEM203Q969S6 136 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 BORCS8Q96FH0 119 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 TECTBQ96PL2 329 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 SPACA5Q96QH8 159 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 TMUB1Q9BVT8 246 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 CCDC168Q8NDH2 2452 aa11.09□□□□□ -0.63
GTF3A-209ENST00000640289 PPIAL4EA0A075B759 164 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 TRBV5-7A0A0A0MS05 114 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 ZNF879B4DU55 563 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 PPIAL4DF5H284 164 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 PIN1P1O15428 100 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 AKR7A2O43488 359 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 SULT1B1O43704 296 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 SYNGR1O43759 233 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 INMTO95050 263 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 PLATP00750 562 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 LHBP01229 141 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 OCMP0CE72 109 aaPredicted RBP11.08□□□□□ -0.64
GTF3A-209ENST00000640289 PPIAL4FP0DN26 164 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 CD99P14209 185 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 PSMB9P28065 219 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 IL2RGP31785 369 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 GMFBP60983 142 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 LOXL1Q08397 574 aaPredicted RBP11.08□□□□□ -0.64
GTF3A-209ENST00000640289 NEDD8Q15843 81 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 ACSM3Q53FZ2 586 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 SFRP4Q6FHJ7 346 aaPredicted RBP11.08□□□□□ -0.64
GTF3A-209ENST00000640289 CRIP3Q6Q6R5 217 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 ZNF573Q86YE8 665 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 BATF2Q8N1L9 274 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 MS4A15Q8N5U1 240 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 DEFB108BQ8NET1 73 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 TSPAN14Q8NG11 270 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 RFT1Q96AA3 541 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 SEH1LQ96EE3 360 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 COX4I2Q96KJ9 171 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 ZNF488Q96MN9 340 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 DERL3Q96Q80 235 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 NKX3-1Q99801 234 aaPredicted RBP11.08□□□□□ -0.64
GTF3A-209ENST00000640289 ZNF696Q9H7X3 374 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 SF3B6Q9Y3B4 125 aaKnown RBP11.08□□□□□ -0.64
GTF3A-209ENST00000640289 PPIAL4AQ9Y536 164 aa11.08□□□□□ -0.64
GTF3A-209ENST00000640289 TRAV8-7A0A075B6U6 113 aa11.07□□□□□ -0.64
GTF3A-209ENST00000640289 MAGEA13PA6NCF6 341 aa11.07□□□□□ -0.64
GTF3A-209ENST00000640289 SC5DO75845 299 aa11.07□□□□□ -0.64
GTF3A-209ENST00000640289 HCKP08631 526 aa11.07□□□□□ -0.64
GTF3A-209ENST00000640289 IGFBP3P17936 291 aaPredicted RBP11.07□□□□□ -0.64
GTF3A-209ENST00000640289 RAB3AP20336 220 aa11.07□□□□□ -0.64
GTF3A-209ENST00000640289 PRKACBP22694 351 aa11.07□□□□□ -0.64
GTF3A-209ENST00000640289 TGFBR2P37173 567 aa11.07□□□□□ -0.64
GTF3A-209ENST00000640289 RBP2P50120 134 aa11.07□□□□□ -0.64
GTF3A-209ENST00000640289 ATP1B3P54709 279 aa11.07□□□□□ -0.64
GTF3A-209ENST00000640289 MTCP1P56278 107 aa11.07□□□□□ -0.64
GTF3A-209ENST00000640289 FAM27D1Q5T7N8 215 aa11.07□□□□□ -0.64
GTF3A-209ENST00000640289 ZNF529Q6P280 563 aa11.07□□□□□ -0.64
GTF3A-209ENST00000640289 UNQ9370/PRO34162Q6UXP9 181 aa11.07□□□□□ -0.64
GTF3A-209ENST00000640289 LRRC28Q86X40 367 aaPredicted RBP11.07□□□□□ -0.64
GTF3A-209ENST00000640289 DNAAF1Q8NEP3 725 aa11.07□□□□□ -0.64
GTF3A-209ENST00000640289 FCGR1BQ92637 280 aa11.07□□□□□ -0.64
GTF3A-209ENST00000640289 SPSB1Q96BD6 273 aa11.07□□□□□ -0.64
GTF3A-209ENST00000640289 WDR13Q9H1Z4 485 aa11.07□□□□□ -0.64
GTF3A-209ENST00000640289 TMEM165Q9HC07 324 aa11.07□□□□□ -0.64
GTF3A-209ENST00000640289 NOX4Q9NPH5 578 aa11.07□□□□□ -0.64
GTF3A-209ENST00000640289 TANC2Q9HCD6 1990 aa11.07□□□□□ -0.64
GTF3A-209ENST00000640289 CHD3Q12873 2000 aaKnown RBP11.06□□□□□ -0.64
GTF3A-209ENST00000640289 IGHV3OR15-7A0A075B7D8 119 aa11.06□□□□□ -0.64
GTF3A-209ENST00000640289 A0A087WXM4 84 aa11.06□□□□□ -0.64
GTF3A-209ENST00000640289 SRRM5B3KS81 715 aa11.06□□□□□ -0.64
GTF3A-209ENST00000640289 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.06□□□□□ -0.64
GTF3A-209ENST00000640289 J3QT63 122 aa11.06□□□□□ -0.64
GTF3A-209ENST00000640289 LGALS8O00214 317 aa11.06□□□□□ -0.64
GTF3A-209ENST00000640289 SPRY1O43609 319 aaPredicted RBP11.06□□□□□ -0.64
GTF3A-209ENST00000640289 ALX3O95076 343 aa11.06□□□□□ -0.64
GTF3A-209ENST00000640289 FSTP19883 344 aa11.06□□□□□ -0.64
GTF3A-209ENST00000640289 MPZP25189 248 aa11.06□□□□□ -0.64
GTF3A-209ENST00000640289 CFHR2P36980 270 aa11.06□□□□□ -0.64
GTF3A-209ENST00000640289 MDH2P40926 338 aaKnown RBP11.06□□□□□ -0.64
GTF3A-209ENST00000640289 POU3F4P49335 361 aa11.06□□□□□ -0.64
GTF3A-209ENST00000640289 GP2P55259 537 aaKnown RBP11.06□□□□□ -0.64
GTF3A-209ENST00000640289 LMO4P61968 165 aa11.06□□□□□ -0.64
GTF3A-209ENST00000640289 TMEM91Q6ZNR0 172 aa11.06□□□□□ -0.64
GTF3A-209ENST00000640289 LHFPL2Q6ZUX7 228 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms