RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 NEIL1Q96FI4 390 aaPredicted RBP18.15■□□□□ 0.5
SCN1B-206ENST00000638536 PDCD1LG2Q9BQ51 273 aa18.15■□□□□ 0.5
SCN1B-206ENST00000638536 SSBP3Q9BWW4 388 aaPredicted RBP18.15■□□□□ 0.5
SCN1B-206ENST00000638536 ERVK-18Q9QC07 812 aa18.15■□□□□ 0.5
SCN1B-206ENST00000638536 FBN1P35555 2871 aaKnown RBP18.14■□□□□ 0.49
SCN1B-206ENST00000638536 PQLC2LA1A4F0 135 aa18.14■□□□□ 0.49
SCN1B-206ENST00000638536 ANKRD61A6NGH8 418 aa18.14■□□□□ 0.49
SCN1B-206ENST00000638536 OR5B21A6NL26 309 aa18.14■□□□□ 0.49
SCN1B-206ENST00000638536 ATP6V1G2O95670 118 aa18.14■□□□□ 0.49
SCN1B-206ENST00000638536 LALBAP00709 142 aa18.14■□□□□ 0.49
SCN1B-206ENST00000638536 ST3GAL4Q11206 333 aa18.14■□□□□ 0.49
SCN1B-206ENST00000638536 ESCO2Q56NI9 601 aa18.14■□□□□ 0.49
SCN1B-206ENST00000638536 TMEM244Q5VVB8 128 aa18.14■□□□□ 0.49
SCN1B-206ENST00000638536 FGFRL1Q8N441 504 aa18.14■□□□□ 0.49
SCN1B-206ENST00000638536 BPIFB6Q8NFQ5 453 aa18.14■□□□□ 0.49
SCN1B-206ENST00000638536 PLEKHA1Q9HB21 404 aa18.14■□□□□ 0.49
SCN1B-206ENST00000638536 SMURF1Q9HCE7 757 aa18.14■□□□□ 0.49
SCN1B-206ENST00000638536 SNTG1Q9NSN8 517 aa18.14■□□□□ 0.49
SCN1B-206ENST00000638536 POLR3KQ9Y2Y1 108 aaPredicted RBP18.14■□□□□ 0.49
SCN1B-206ENST00000638536 SIRT4Q9Y6E7 314 aaPredicted RBP18.14■□□□□ 0.49
SCN1B-206ENST00000638536 IGKV1-27A0A075B6S5 117 aa18.13■□□□□ 0.49
SCN1B-206ENST00000638536 TRAV38-1A0A0B4J264 116 aa18.13■□□□□ 0.49
SCN1B-206ENST00000638536 H0YJX3 145 aa18.13■□□□□ 0.49
SCN1B-206ENST00000638536 SYNGR1O43759 233 aa18.13■□□□□ 0.49
SCN1B-206ENST00000638536 ZFPL1O95159 310 aa18.13■□□□□ 0.49
SCN1B-206ENST00000638536 PITPNBP48739 271 aa18.13■□□□□ 0.49
SCN1B-206ENST00000638536 PAX2Q02962 417 aa18.13■□□□□ 0.49
SCN1B-206ENST00000638536 DOC2BQ14184 412 aa18.13■□□□□ 0.49
SCN1B-206ENST00000638536 DCAF12L2Q5VW00 463 aa18.13■□□□□ 0.49
SCN1B-206ENST00000638536 WDR25Q64LD2 544 aaPredicted RBP18.13■□□□□ 0.49
SCN1B-206ENST00000638536 CALHM1Q8IU99 346 aa18.13■□□□□ 0.49
SCN1B-206ENST00000638536 OR8B3Q8NGG8 313 aa18.13■□□□□ 0.49
SCN1B-206ENST00000638536 OR10Z1Q8NGY1 313 aa18.13■□□□□ 0.49
SCN1B-206ENST00000638536 FGGYQ96C11 551 aa18.13■□□□□ 0.49
SCN1B-206ENST00000638536 MRPL48Q96GC5 212 aaKnown RBP18.13■□□□□ 0.49
SCN1B-206ENST00000638536 TMEM80Q96HE8 168 aa18.13■□□□□ 0.49
SCN1B-206ENST00000638536 ZNF488Q96MN9 340 aa18.13■□□□□ 0.49
SCN1B-206ENST00000638536 OR8B2Q96RD0 313 aa18.13■□□□□ 0.49
SCN1B-206ENST00000638536 CHST5Q9GZS9 411 aa18.13■□□□□ 0.49
SCN1B-206ENST00000638536 PSORS1C1Q9UIG5 152 aa18.13■□□□□ 0.49
SCN1B-206ENST00000638536 LRCH1Q9Y2L9 728 aa18.13■□□□□ 0.49
SCN1B-206ENST00000638536 ADAM20O43506 726 aa18.12■□□□□ 0.49
SCN1B-206ENST00000638536 FAM157CP0CG43 387 aa18.12■□□□□ 0.49
SCN1B-206ENST00000638536 C21orf33P30042 268 aaPredicted RBP18.12■□□□□ 0.49
SCN1B-206ENST00000638536 HAAOP46952 286 aa18.12■□□□□ 0.49
SCN1B-206ENST00000638536 GNB2P62879 340 aa18.12■□□□□ 0.49
SCN1B-206ENST00000638536 ANGPTL5Q86XS5 388 aa18.12■□□□□ 0.49
SCN1B-206ENST00000638536 BATF2Q8N1L9 274 aa18.12■□□□□ 0.49
SCN1B-206ENST00000638536 ZNF676Q8N7Q3 588 aa18.12■□□□□ 0.49
SCN1B-206ENST00000638536 CCL13Q99616 98 aa18.12■□□□□ 0.49
SCN1B-206ENST00000638536 PLCXD1Q9NUJ7 323 aa18.12■□□□□ 0.49
SCN1B-206ENST00000638536 LPAR3Q9UBY5 353 aa18.12■□□□□ 0.49
SCN1B-206ENST00000638536 OPN4Q9UHM6 478 aa18.12■□□□□ 0.49
SCN1B-206ENST00000638536 CAB39Q9Y376 341 aaPredicted RBP18.12■□□□□ 0.49
SCN1B-206ENST00000638536 LOC105371242A0A075B767 164 aa18.12■□□□□ 0.49
SCN1B-206ENST00000638536 IGKV1-9A0A0C4DH69 117 aa18.12■□□□□ 0.49
SCN1B-206ENST00000638536 A0A0G2JMP0 313 aa18.12■□□□□ 0.49
SCN1B-206ENST00000638536 A0A0X1KG70 313 aa18.12■□□□□ 0.49
SCN1B-206ENST00000638536 ADRA2CP18825 462 aa18.12■□□□□ 0.49
SCN1B-206ENST00000638536 GBX2P52951 348 aaPredicted RBP18.12■□□□□ 0.49
SCN1B-206ENST00000638536 AHSA2Q719I0 299 aa18.12■□□□□ 0.49
SCN1B-206ENST00000638536 EGFL6Q8IUX8 553 aa18.12■□□□□ 0.49
SCN1B-206ENST00000638536 ZNF485Q8NCK3 441 aa18.12■□□□□ 0.49
SCN1B-206ENST00000638536 OR4M2Q8NGB6 313 aa18.12■□□□□ 0.49
SCN1B-206ENST00000638536 GATAD2BQ8WXI9 593 aa18.12■□□□□ 0.49
SCN1B-206ENST00000638536 SGCDQ92629 289 aa18.12■□□□□ 0.49
SCN1B-206ENST00000638536 DACT3Q96B18 629 aaPredicted RBP18.12■□□□□ 0.49
SCN1B-206ENST00000638536 HHLA2Q9UM44 414 aa18.12■□□□□ 0.49
SCN1B-206ENST00000638536 FAM230AA0A1W2PPH8 454 aa18.11■□□□□ 0.49
SCN1B-206ENST00000638536 PIPP12273 146 aaPredicted RBP18.11■□□□□ 0.49
SCN1B-206ENST00000638536 SRD5A1P18405 259 aa18.11■□□□□ 0.49
SCN1B-206ENST00000638536 RIPK1Q13546 671 aa18.11■□□□□ 0.49
SCN1B-206ENST00000638536 MICBQ29980 383 aa18.11■□□□□ 0.49
SCN1B-206ENST00000638536 IZUMO2Q6UXV1 221 aa18.11■□□□□ 0.49
SCN1B-206ENST00000638536 RNF144BQ7Z419 303 aa18.11■□□□□ 0.49
SCN1B-206ENST00000638536 RGP1Q92546 391 aaPredicted RBP18.11■□□□□ 0.49
SCN1B-206ENST00000638536 C7orf69Q9H7B7 122 aa18.11■□□□□ 0.49
SCN1B-206ENST00000638536 CLN8Q9UBY8 286 aa18.11■□□□□ 0.49
SCN1B-206ENST00000638536 EXOSC1Q9Y3B2 195 aaKnown RBP18.11■□□□□ 0.49
SCN1B-206ENST00000638536 PCDHGB5Q9Y5G0 923 aa18.11■□□□□ 0.49
SCN1B-206ENST00000638536 PPIAL4CA0A0B4J2A2 164 aa18.1■□□□□ 0.49
SCN1B-206ENST00000638536 IRGMA1A4Y4 181 aa18.1■□□□□ 0.49
SCN1B-206ENST00000638536 TMPRSS2O15393 492 aa18.1■□□□□ 0.49
SCN1B-206ENST00000638536 SELLP14151 372 aa18.1■□□□□ 0.49
SCN1B-206ENST00000638536 MUC1P15941 1255 aaPredicted RBP18.1■□□□□ 0.49
SCN1B-206ENST00000638536 ZNF12P17014 697 aa18.1■□□□□ 0.49
SCN1B-206ENST00000638536 TGM4P49221 684 aa18.1■□□□□ 0.49
SCN1B-206ENST00000638536 STUMQ69YW2 141 aa18.1■□□□□ 0.49
SCN1B-206ENST00000638536 NLRC3Q7RTR2 1065 aa18.1■□□□□ 0.49
SCN1B-206ENST00000638536 FAM216BQ8N7L0 139 aa18.1■□□□□ 0.49
SCN1B-206ENST00000638536 CCDC54Q8NEL0 328 aa18.1■□□□□ 0.49
SCN1B-206ENST00000638536 MYCBPQ99417 103 aaPredicted RBP18.1■□□□□ 0.49
SCN1B-206ENST00000638536 FKBP14Q9NWM8 211 aa18.1■□□□□ 0.49
SCN1B-206ENST00000638536 CNOT2Q9NZN8 540 aaKnown RBP18.1■□□□□ 0.49
SCN1B-206ENST00000638536 INSIG2Q9Y5U4 225 aa18.1■□□□□ 0.49
SCN1B-206ENST00000638536 TRBV2A0A0J9YWF9 115 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 EFCAB10A6NFE3 127 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 C22orf46C9J442 243 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 HNF1AP20823 631 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 GLRA1P23415 457 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms