RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 C2CD4CQ8TF44 421 aa17.64■□□□□ 0.41
SYNGAP1-227ENST00000638142 HAS2Q92819 552 aa17.64■□□□□ 0.41
SYNGAP1-227ENST00000638142 SHDQ96IW2 340 aa17.64■□□□□ 0.41
SYNGAP1-227ENST00000638142 NELFAQ9H3P2 528 aa17.64■□□□□ 0.41
SYNGAP1-227ENST00000638142 PARP11Q9NR21 331 aa17.64■□□□□ 0.41
SYNGAP1-227ENST00000638142 ZNF701Q9NV72 531 aaPredicted RBP17.64■□□□□ 0.41
SYNGAP1-227ENST00000638142 K7EPK0 472 aa17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 TIAF1O95411 115 aa17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 CD5P06127 495 aa17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 SFTA3P0C7M3 94 aa17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 FCGR2AP12318 317 aa17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 RPL12P30050 165 aaKnown RBP17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 SMCO1Q147U7 214 aa17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 BTNL8Q6UX41 500 aa17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 Q6ZSR3 168 aa17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 SULF2Q8IWU5 870 aa17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 SGPP2Q8IWX5 399 aa17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 FAM71E2Q8N5Q1 922 aa17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 C10orf35Q96D05 121 aa17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 SPACA9Q96E40 222 aaPredicted RBP17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 JTBO76095 146 aa17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 CTSDP07339 412 aaPredicted RBP17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 FCGR3AP08637 254 aa17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 RCC1P18754 421 aaPredicted RBP17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 NME2P22392 152 aa17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 F2RL1P55085 397 aa17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 SWI5Q1ZZU3 235 aa17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 CCDC54Q8NEL0 328 aa17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 SEMA6DQ8NFY4 1073 aa17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 CPNE2Q96FN4 548 aaPredicted RBP17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 TUBD1Q9UJT1 453 aa17.63■□□□□ 0.41
SYNGAP1-227ENST00000638142 DEDDO75618 318 aa17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 SCRG1O75711 98 aa17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 SERPINA5P05154 406 aa17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 FAHP16930 419 aa17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 KLK2P20151 261 aa17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 CSNK1A1P48729 337 aa17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 ZNF133P52736 654 aaPredicted RBP17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 COL19A1Q14993 1142 aa17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 C10orf128Q5T292 105 aa17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 GALNTL5Q7Z4T8 443 aa17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 FOXRED2Q8IWF2 684 aa17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 WDSUB1Q8N9V3 476 aa17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 OR6C1Q96RD1 312 aa17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 ZNF2Q9BSG1 426 aaPredicted RBP17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 EGLN1Q9GZT9 426 aa17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 SMCO4Q9NRQ5 59 aa17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 DECR2Q9NUI1 292 aa17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 F5H5K5 113 aa17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 FBXO24O75426 580 aa17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 RAB5BP61020 215 aa17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 SPEM2Q0P670 501 aa17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 OR2A2Q6IF42 318 aa17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 ZFP82Q8N141 532 aa17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 RASL10BQ96S79 203 aa17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 ELL3Q9HB65 397 aaPredicted RBP17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 MCTS1Q9ULC4 181 aaKnown RBP17.62■□□□□ 0.41
SYNGAP1-227ENST00000638142 EIF3GO75821 320 aaKnown RBP eCLIP17.61■□□□□ 0.41
SYNGAP1-227ENST00000638142 DKK1O94907 266 aa17.61■□□□□ 0.41
SYNGAP1-227ENST00000638142 IFNA21P01568 189 aa17.61■□□□□ 0.41
SYNGAP1-227ENST00000638142 ENDOGQ14249 297 aaKnown RBP17.61■□□□□ 0.41
SYNGAP1-227ENST00000638142 OPN5Q6U736 354 aa17.61■□□□□ 0.41
SYNGAP1-227ENST00000638142 ZNF574Q6ZN55 896 aaPredicted RBP17.61■□□□□ 0.41
SYNGAP1-227ENST00000638142 FOXL2NBQ6ZUU3 175 aa17.61■□□□□ 0.41
SYNGAP1-227ENST00000638142 CRB3Q9BUF7 120 aa17.61■□□□□ 0.41
SYNGAP1-227ENST00000638142 PLEKHJ1Q9NW61 149 aa17.61■□□□□ 0.41
SYNGAP1-227ENST00000638142 PIGLQ9Y2B2 252 aa17.61■□□□□ 0.41
SYNGAP1-227ENST00000638142 PCDHGA1Q9Y5H4 931 aa17.61■□□□□ 0.41
SYNGAP1-227ENST00000638142 ABCA7Q8IZY2 2146 aa17.61■□□□□ 0.41
SYNGAP1-227ENST00000638142 IGKV1D-8A0A087WSZ0 117 aa17.61■□□□□ 0.41
SYNGAP1-227ENST00000638142 CRYM-AS1A6NIL9 109 aa17.61■□□□□ 0.41
SYNGAP1-227ENST00000638142 OTX1P32242 354 aaPredicted RBP17.61■□□□□ 0.41
SYNGAP1-227ENST00000638142 AFF3P51826 1226 aaKnown RBP17.61■□□□□ 0.41
SYNGAP1-227ENST00000638142 HABP2Q14520 560 aaPredicted RBP17.61■□□□□ 0.41
SYNGAP1-227ENST00000638142 C6orf201Q7Z4U5 140 aa17.61■□□□□ 0.41
SYNGAP1-227ENST00000638142 C15orf54Q8N8G6 183 aa17.61■□□□□ 0.41
SYNGAP1-227ENST00000638142 PRRX2Q99811 253 aa17.61■□□□□ 0.41
SYNGAP1-227ENST00000638142 FBXL17Q9UF56 701 aa17.61■□□□□ 0.41
SYNGAP1-227ENST00000638142 C19orf25Q9UFG5 118 aaPredicted RBP17.61■□□□□ 0.41
SYNGAP1-227ENST00000638142 EDARQ9UNE0 448 aa17.61■□□□□ 0.41
SYNGAP1-227ENST00000638142 DHRS7CA6NNS2 312 aa17.6■□□□□ 0.41
SYNGAP1-227ENST00000638142 FCGR2CP31995 323 aa17.6■□□□□ 0.41
SYNGAP1-227ENST00000638142 FAM76BQ5HYJ3 339 aa17.6■□□□□ 0.41
SYNGAP1-227ENST00000638142 TMEM54Q969K7 222 aa17.6■□□□□ 0.41
SYNGAP1-227ENST00000638142 Q96M66 194 aa17.6■□□□□ 0.41
SYNGAP1-227ENST00000638142 SPSB2Q99619 263 aa17.6■□□□□ 0.41
SYNGAP1-227ENST00000638142 DEFB126Q9BYW3 111 aa17.6■□□□□ 0.41
SYNGAP1-227ENST00000638142 CA14Q9ULX7 337 aa17.6■□□□□ 0.41
SYNGAP1-227ENST00000638142 ACAA1P09110 424 aaPredicted RBP17.6■□□□□ 0.41
SYNGAP1-227ENST00000638142 DVL1P1P54792 670 aaPredicted RBP17.6■□□□□ 0.41
SYNGAP1-227ENST00000638142 HIST1H3AP68431 136 aa17.6■□□□□ 0.41
SYNGAP1-227ENST00000638142 H3F3AP84243 136 aa17.6■□□□□ 0.41
SYNGAP1-227ENST00000638142 HIST2H3PS2Q5TEC6 136 aa17.6■□□□□ 0.41
SYNGAP1-227ENST00000638142 HIST2H3AQ71DI3 136 aa17.6■□□□□ 0.41
SYNGAP1-227ENST00000638142 PIGTQ969N2 578 aa17.6■□□□□ 0.41
SYNGAP1-227ENST00000638142 SULT4A1Q9BR01 284 aa17.6■□□□□ 0.41
SYNGAP1-227ENST00000638142 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 OR5H15A6NDH6 313 aa17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 FAM157AC9JC47 383 aa17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 BCAT2O15382 392 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms