RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 SERPINA5P05154 406 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 VSIG8P0DPA2 414 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 CD37P11049 281 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 RPL35P42766 123 aaKnown RBP3.52□□□□□ -1.85
SCN1A-214ENST00000637038 RAB13P51153 203 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 HERV-K104P61576 105 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 KCNAB1Q14722 419 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 GNMTQ14749 295 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 CNN3Q15417 329 aaKnown RBP3.52□□□□□ -1.85
SCN1A-214ENST00000637038 PCK2Q16822 640 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 GALNTL5Q7Z4T8 443 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 SLC22A18ASQ8N1D0 253 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 PRR18Q8N4B5 295 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 NUBPLQ8TB37 319 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 OR51E1Q8TCB6 317 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 ZNF845Q96IR2 970 aaPredicted RBP3.52□□□□□ -1.85
SCN1A-214ENST00000637038 OXGR1Q96P68 337 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 AQP10Q96PS8 301 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 DMRTA2Q96SC8 542 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 SULT4A1Q9BR01 284 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 HRH4Q9H3N8 390 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 RHOFQ9HBH0 211 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 ZNF160Q9HCG1 818 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 ZNF701Q9NV72 531 aaPredicted RBP3.52□□□□□ -1.85
SCN1A-214ENST00000637038 HDGFL3Q9Y3E1 203 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 CLDN16Q9Y5I7 305 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 DMRT1Q9Y5R6 373 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 A0A087WZY1 265 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 TMEM14DPA8MWL7 114 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 M0R036 132 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 HSPA12AO43301 675 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 EIF1BO60739 113 aaKnown RBP3.52□□□□□ -1.85
SCN1A-214ENST00000637038 CLPSP04118 112 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 GAPDHP04406 335 aaKnown RBP3.52□□□□□ -1.85
SCN1A-214ENST00000637038 CELA2BP08218 269 aaPredicted RBP3.52□□□□□ -1.85
SCN1A-214ENST00000637038 CD46P15529 392 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 CSNK1A1P48729 337 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 CAMLGP49069 296 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 CAV2P51636 162 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 SNU13P55769 128 aaKnown RBP3.52□□□□□ -1.85
SCN1A-214ENST00000637038 GFERP55789 205 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 RNF4P78317 190 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 PDZK1IP1Q13113 114 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 IAH1Q2TAA2 248 aaPredicted RBP3.52□□□□□ -1.85
SCN1A-214ENST00000637038 SLC22A6Q4U2R8 563 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 OXLD1Q5BKU9 147 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 C1QL3Q5VWW1 255 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 DHRS7BQ6IAN0 325 aaPredicted RBP3.52□□□□□ -1.85
SCN1A-214ENST00000637038 FAM57BQ71RH2 274 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 C9orf40Q8IXQ3 194 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 C15orf54Q8N8G6 183 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 GJC3Q8NFK1 279 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 OR52N4Q8NGI2 321 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 ST7LQ8TDW4 575 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 DNAJA3Q96EY1 480 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 OCSTAMPQ9BR26 566 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 ST6GALNAC5Q9BVH7 336 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 METTL9Q9H1A3 318 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 PARP11Q9NR21 331 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 UQCC1Q9NVA1 299 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 FAM206AQ9NX38 181 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 TMEM184BQ9Y519 407 aaPredicted RBP3.52□□□□□ -1.85
SCN1A-214ENST00000637038 COL6A3P12111 3177 aa3.52□□□□□ -1.85
SCN1A-214ENST00000637038 IGHV5-51A0A0C4DH38 117 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 PQLC2LA1A4F0 135 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 LIPT2A6NK58 231 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 ZNF98A6NK75 572 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 GJE1A6NN92 205 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 E5RGE8 158 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 PRSS44E7EML9 344 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 NPIPA2E9PIF3 369 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 NPIPA3F8WFD2 350 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 ZNF354AO60765 605 aaPredicted RBP3.51□□□□□ -1.85
SCN1A-214ENST00000637038 VAMP5O95183 116 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 TTRP02766 147 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 CYC1P08574 325 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 ZNF14P17017 642 aaPredicted RBP3.51□□□□□ -1.85
SCN1A-214ENST00000637038 BLVRBP30043 206 aaPredicted RBP3.51□□□□□ -1.85
SCN1A-214ENST00000637038 DVL1P1P54792 670 aaPredicted RBP3.51□□□□□ -1.85
SCN1A-214ENST00000637038 RAB1AP62820 205 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 RHEBQ15382 184 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 C1orf189Q5VU69 101 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 OR52W1Q6IF63 320 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 TMEM71Q6P5X7 295 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 HIST2H3AQ71DI3 136 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 OR6X1Q8NH79 312 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 TCTEX1D2Q8WW35 142 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 TCEAL3Q969E4 200 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 RPP25Q9BUL9 199 aaKnown RBP3.51□□□□□ -1.85
SCN1A-214ENST00000637038 DEFB126Q9BYW3 111 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 GPR84Q9NQS5 396 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 PLEKHJ1Q9NW61 149 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 DHCR7Q9UBM7 475 aaKnown RBP3.51□□□□□ -1.85
SCN1A-214ENST00000637038 ZNF230Q9UIE0 474 aaPredicted RBP3.51□□□□□ -1.85
SCN1A-214ENST00000637038 GPR132Q9UNW8 380 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 GAB2Q9UQC2 676 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 VDAC3Q9Y277 283 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 NSG2Q9Y328 171 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 TRBV11-1A0A0K0K1C0 115 aa3.51□□□□□ -1.85
SCN1A-214ENST00000637038 RNASEK-C17orf49H0YIS7 233 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms