RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 TMEM244Q5VVB8 128 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 DEGS2Q6QHC5 323 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 BAP18Q8IXM2 172 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 ZNF519Q8TB69 540 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 RELTQ969Z4 430 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 SARAFQ96BY9 339 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 SEC22AQ96IW7 307 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 TAS2R4Q9NYW5 299 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 R4GMQ9 66 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 COL12A1Q99715 3063 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 ARHGAP21Q5T5U3 1957 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 DBX1A6NMT0 343 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 H3BML4 177 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 IFNA4P05014 189 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 CRHP06850 196 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 IL11P20809 199 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 CXCR1P25024 350 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 CRABP1P29762 137 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 PPP1R1AQ13522 171 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 DOLPP1Q86YN1 238 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 FAM46BQ96A09 425 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 PIGQQ9BRB3 760 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 TXNIPQ9H3M7 391 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 CHMP1AQ9HD42 196 aaPredicted RBP13.56□□□□□ -0.24
CLN8-209ENST00000635970 IGLV1-36A0A0B4J1U3 117 aa13.55□□□□□ -0.24
CLN8-209ENST00000635970 PCP4L1A6NKN8 68 aa13.55□□□□□ -0.24
CLN8-209ENST00000635970 F8W036 122 aa13.55□□□□□ -0.24
CLN8-209ENST00000635970 LHX2P50458 406 aa13.55□□□□□ -0.24
CLN8-209ENST00000635970 EIF5AP63241 154 aaKnown RBP13.55□□□□□ -0.24
CLN8-209ENST00000635970 BLOC1S1P78537 153 aa13.55□□□□□ -0.24
CLN8-209ENST00000635970 SRYQ05066 204 aa13.55□□□□□ -0.24
CLN8-209ENST00000635970 STK11Q15831 433 aa13.55□□□□□ -0.24
CLN8-209ENST00000635970 LRRC37A5PQ49AS3 106 aa13.55□□□□□ -0.24
CLN8-209ENST00000635970 ZNF585AQ6P3V2 769 aa13.55□□□□□ -0.24
CLN8-209ENST00000635970 LYPD6Q86Y78 171 aa13.55□□□□□ -0.24
CLN8-209ENST00000635970 RPRMLQ8N4K4 120 aa13.55□□□□□ -0.24
CLN8-209ENST00000635970 OR13C3Q8NGS6 347 aa13.55□□□□□ -0.24
CLN8-209ENST00000635970 OR52N5Q8NH56 324 aa13.55□□□□□ -0.24
CLN8-209ENST00000635970 SAT2Q96F10 170 aaPredicted RBP13.55□□□□□ -0.24
CLN8-209ENST00000635970 CST11Q9H112 138 aa13.55□□□□□ -0.24
CLN8-209ENST00000635970 KCNK15Q9H427 330 aa13.55□□□□□ -0.24
CLN8-209ENST00000635970 ZFP57Q9NU63 452 aa13.55□□□□□ -0.24
CLN8-209ENST00000635970 ALKBH4Q9NXW9 302 aa13.55□□□□□ -0.24
CLN8-209ENST00000635970 FBLN5Q9UBX5 448 aa13.55□□□□□ -0.24
CLN8-209ENST00000635970 GDF2Q9UK05 429 aaPredicted RBP13.55□□□□□ -0.24
CLN8-209ENST00000635970 GTF2A1LQ9UNN4 478 aa13.55□□□□□ -0.24
CLN8-209ENST00000635970 A0A087WZY1 265 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 A0A0B4J2A0 478 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 GPR31O00270 319 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 PRRG2O14669 202 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 SRSF10O75494 262 aaKnown RBP13.54□□□□□ -0.24
CLN8-209ENST00000635970 APOC1P02654 83 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 OPN1LWP04000 364 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 SPARCP09486 303 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 RPS27P42677 84 aaKnown RBP13.54□□□□□ -0.24
CLN8-209ENST00000635970 GLO1Q04760 184 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 FJX1Q86VR8 437 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 JAGN1Q8N5M9 183 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 UQCC2Q9BRT2 126 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 ABHD6Q9BV23 337 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 MRPL22Q9NWU5 206 aaKnown RBP13.54□□□□□ -0.24
CLN8-209ENST00000635970 SHPKQ9UHJ6 478 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 LRP12Q9Y561 859 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 PHF3Q92576 2039 aaKnown RBP13.54□□□□□ -0.24
CLN8-209ENST00000635970 RAB27BO00194 218 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 EFNA2O43921 213 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 BPNT1O95861 308 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 ACTL6AO96019 429 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 ZNF17P17021 662 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 PGCP20142 388 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 HSD11B1P28845 292 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 CA7P43166 264 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 CLDN18P56856 261 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 EIF2B1Q14232 305 aaKnown RBP13.54□□□□□ -0.24
CLN8-209ENST00000635970 BEX5Q5H9J7 111 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 EIF5AL1Q6IS14 154 aaKnown RBP13.54□□□□□ -0.24
CLN8-209ENST00000635970 POMZP3Q6PJE2 187 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 C5orf46Q6UWT4 87 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 PLXDC2Q6UX71 529 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 SLC35D2Q76EJ3 337 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 TRAPPC6BQ86SZ2 158 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 DMBX1Q8NFW5 382 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 LILRB1Q8NHL6 650 aaPredicted RBP13.54□□□□□ -0.24
CLN8-209ENST00000635970 WDYHV1Q96HA8 205 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 SCGB3A2Q96PL1 93 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 C12orf57Q99622 126 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 PTDSS2Q9BVG9 487 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 PRDM14Q9GZV8 571 aa13.54□□□□□ -0.24
CLN8-209ENST00000635970 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.53□□□□□ -0.24
CLN8-209ENST00000635970 TMEM235A6NFC5 223 aa13.53□□□□□ -0.24
CLN8-209ENST00000635970 FAM25EA8MYX2 175 aa13.53□□□□□ -0.24
CLN8-209ENST00000635970 H3BSH0 61 aa13.53□□□□□ -0.24
CLN8-209ENST00000635970 CCSO14618 274 aa13.53□□□□□ -0.24
CLN8-209ENST00000635970 SLC16A7O60669 478 aa13.53□□□□□ -0.24
CLN8-209ENST00000635970 IFNA6P05013 189 aa13.53□□□□□ -0.24
CLN8-209ENST00000635970 ERCC1P07992 297 aaPredicted RBP13.53□□□□□ -0.24
CLN8-209ENST00000635970 LYL1P12980 280 aa13.53□□□□□ -0.24
CLN8-209ENST00000635970 ZNF708P17019 499 aa13.53□□□□□ -0.24
CLN8-209ENST00000635970 SLC6A9P48067 706 aa13.53□□□□□ -0.24
CLN8-209ENST00000635970 ARHGDIBP52566 201 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms