RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 NDUFB11Q9NX14 153 aa7.17□□□□□ -1.26
CDKL5-209ENST00000635828 DOCK11Q5JSL3 2073 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 LOC100506127A0A0U1RQW1 187 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 LOC390937A0A1W2PQ73 354 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 hCG_1807616A0A1W2PRN6 198 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 SMAD7O15105 426 aaKnown RBP7.16□□□□□ -1.26
CDKL5-209ENST00000635828 MTRF1O75570 445 aaKnown RBP7.16□□□□□ -1.26
CDKL5-209ENST00000635828 CDRT1O95170 752 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 ZNF20P17024 532 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 AZGP1P25311 298 aaKnown RBP7.16□□□□□ -1.26
CDKL5-209ENST00000635828 CALRP27797 417 aaKnown RBP7.16□□□□□ -1.26
CDKL5-209ENST00000635828 DUSP1P28562 367 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 CLDN12P56749 244 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 CLEC12BQ2HXU8 276 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 Q499Y3 187 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 SYT6Q5T7P8 510 aaPredicted RBP7.16□□□□□ -1.26
CDKL5-209ENST00000635828 LYPD2Q6UXB3 125 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 PARP16Q8N5Y8 322 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 SLAMF9Q96A28 289 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 CHCHD6Q9BRQ6 235 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 YTHDF1Q9BYJ9 559 aaKnown RBP7.16□□□□□ -1.26
CDKL5-209ENST00000635828 RAB1BQ9H0U4 201 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 OR51I2Q9H344 312 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 MTCH1Q9NZJ7 389 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 IL19Q9UHD0 177 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 IGHV4-61A0A0C4DH41 118 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 PQLC2LA1A4F0 135 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 TRIM64CA6NLI5 447 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 GOSR1O95249 250 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 CD36P16671 472 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 POU3F4P49335 361 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 YIF1BQ5BJH7 314 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 RBFOX1Q9NWB1 397 aaKnown RBP7.16□□□□□ -1.26
CDKL5-209ENST00000635828 METRNQ9UJH8 293 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 ZDHHC8Q9ULC8 765 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 TRBV5-7A0A0A0MS05 114 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 SFTPBP07988 381 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 IGFBP3P17936 291 aaPredicted RBP7.16□□□□□ -1.26
CDKL5-209ENST00000635828 MXD1Q05195 221 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 RIN1Q13671 783 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 ZMYND11Q15326 602 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 DNM1P46Q6ZS02 220 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 SERPINA12Q8IW75 414 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 NR1H4Q96RI1 486 aaPredicted RBP7.16□□□□□ -1.26
CDKL5-209ENST00000635828 LPAR2Q9HBW0 351 aa7.16□□□□□ -1.26
CDKL5-209ENST00000635828 AK6Q9Y3D8 172 aaKnown RBP7.16□□□□□ -1.26
CDKL5-209ENST00000635828 A0A087WXM4 84 aa7.15□□□□□ -1.26
CDKL5-209ENST00000635828 VSTM5A8MXK1 200 aa7.15□□□□□ -1.26
CDKL5-209ENST00000635828 CCRL2O00421 344 aa7.15□□□□□ -1.26
CDKL5-209ENST00000635828 PPIHO43447 177 aaKnown RBP7.15□□□□□ -1.26
CDKL5-209ENST00000635828 AMY2BP19961 511 aa7.15□□□□□ -1.26
CDKL5-209ENST00000635828 FAM76BQ5HYJ3 339 aa7.15□□□□□ -1.26
CDKL5-209ENST00000635828 OR10K2Q6IF99 312 aa7.15□□□□□ -1.26
CDKL5-209ENST00000635828 Q71RC1 249 aaPredicted RBP7.15□□□□□ -1.26
CDKL5-209ENST00000635828 OR4D6Q8NGJ1 314 aa7.15□□□□□ -1.26
CDKL5-209ENST00000635828 ZCCHC4Q9H5U6 513 aa7.15□□□□□ -1.26
CDKL5-209ENST00000635828 EXOSC4Q9NPD3 245 aaKnown RBP7.15□□□□□ -1.26
CDKL5-209ENST00000635828 TMEM106BQ9NUM4 274 aa7.15□□□□□ -1.26
CDKL5-209ENST00000635828 WIPI2Q9Y4P8 454 aa7.15□□□□□ -1.26
CDKL5-209ENST00000635828 PTBP3O95758 552 aaKnown RBP7.15□□□□□ -1.26
CDKL5-209ENST00000635828 HCKP08631 526 aa7.15□□□□□ -1.26
CDKL5-209ENST00000635828 DDOSTP39656 456 aa7.15□□□□□ -1.26
CDKL5-209ENST00000635828 MTCP1P56278 107 aa7.15□□□□□ -1.26
CDKL5-209ENST00000635828 ZNF529Q6P280 563 aa7.15□□□□□ -1.26
CDKL5-209ENST00000635828 SLC25A26Q70HW3 274 aa7.15□□□□□ -1.26
CDKL5-209ENST00000635828 CSNK2A3Q8NEV1 391 aa7.15□□□□□ -1.26
CDKL5-209ENST00000635828 MRPL48Q96GC5 212 aaKnown RBP7.15□□□□□ -1.26
CDKL5-209ENST00000635828 GAL3ST1Q99999 423 aa7.15□□□□□ -1.26
CDKL5-209ENST00000635828 FUNDC2Q9BWH2 189 aa7.15□□□□□ -1.26
CDKL5-209ENST00000635828 CXXC4Q9H2H0 198 aa7.15□□□□□ -1.26
CDKL5-209ENST00000635828 TXNL4BQ9NX01 149 aaKnown RBP7.15□□□□□ -1.26
CDKL5-209ENST00000635828 KIAA2026Q5HYC2 2103 aa7.15□□□□□ -1.27
CDKL5-209ENST00000635828 H3BSA7 217 aa7.15□□□□□ -1.27
CDKL5-209ENST00000635828 SULT1B1O43704 296 aa7.15□□□□□ -1.27
CDKL5-209ENST00000635828 CD55P08174 381 aa7.15□□□□□ -1.27
CDKL5-209ENST00000635828 CFL1P23528 166 aaKnown RBP7.15□□□□□ -1.27
CDKL5-209ENST00000635828 GABRA5P31644 462 aa7.15□□□□□ -1.27
CDKL5-209ENST00000635828 VBP1P61758 197 aa7.15□□□□□ -1.27
CDKL5-209ENST00000635828 NCS1P62166 190 aa7.15□□□□□ -1.27
CDKL5-209ENST00000635828 BDH1Q02338 343 aa7.15□□□□□ -1.27
CDKL5-209ENST00000635828 KISS1Q15726 138 aa7.15□□□□□ -1.27
CDKL5-209ENST00000635828 UNQ9370/PRO34162Q6UXP9 181 aa7.15□□□□□ -1.27
CDKL5-209ENST00000635828 LRRTM1Q86UE6 522 aa7.15□□□□□ -1.27
CDKL5-209ENST00000635828 C1orf174Q8IYL3 243 aa7.15□□□□□ -1.27
CDKL5-209ENST00000635828 SVOPQ8N4V2 548 aa7.15□□□□□ -1.27
CDKL5-209ENST00000635828 LRRC29Q8WV35 223 aa7.15□□□□□ -1.27
CDKL5-209ENST00000635828 AQP3Q92482 292 aa7.15□□□□□ -1.27
CDKL5-209ENST00000635828 YIPF6Q96EC8 236 aa7.15□□□□□ -1.27
CDKL5-209ENST00000635828 FAM192AQ9GZU8 254 aa7.15□□□□□ -1.27
CDKL5-209ENST00000635828 CNTD2Q9H8S5 307 aa7.15□□□□□ -1.27
CDKL5-209ENST00000635828 A0A096LNT2 108 aa7.14□□□□□ -1.27
CDKL5-209ENST00000635828 ISPDA4D126 451 aa7.14□□□□□ -1.27
CDKL5-209ENST00000635828 ANXA2P2A6NMY6 339 aa7.14□□□□□ -1.27
CDKL5-209ENST00000635828 TMEM178BH3BS89 294 aa7.14□□□□□ -1.27
CDKL5-209ENST00000635828 GYPAP02724 150 aa7.14□□□□□ -1.27
CDKL5-209ENST00000635828 ATF1P18846 271 aa7.14□□□□□ -1.27
CDKL5-209ENST00000635828 SRMP19623 302 aa7.14□□□□□ -1.27
CDKL5-209ENST00000635828 BCL3P20749 454 aa7.14□□□□□ -1.27
CDKL5-209ENST00000635828 CD200P41217 278 aa7.14□□□□□ -1.27
CDKL5-209ENST00000635828 TAS2R43P59537 309 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms